RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 SIGLEC11Q96RL6 698 aa13.59□□□□□ -0.23
CIRBP-241ENST00000593048 MRI1Q9BV20 369 aa13.59□□□□□ -0.23
CIRBP-241ENST00000593048 TEX12Q9BXU0 123 aa13.59□□□□□ -0.23
CIRBP-241ENST00000593048 WDR76Q9H967 626 aa13.59□□□□□ -0.23
CIRBP-241ENST00000593048 MMP26Q9NRE1 261 aa13.59□□□□□ -0.23
CIRBP-241ENST00000593048 PLCXD1Q9NUJ7 323 aa13.59□□□□□ -0.23
CIRBP-241ENST00000593048 TMEM100Q9NV29 134 aa13.59□□□□□ -0.23
CIRBP-241ENST00000593048 OPN4Q9UHM6 478 aa13.59□□□□□ -0.23
CIRBP-241ENST00000593048 AUP1Q9Y679 476 aa13.59□□□□□ -0.23
CIRBP-241ENST00000593048 LRRC30A6NM36 301 aa13.58□□□□□ -0.24
CIRBP-241ENST00000593048 ZAR1LA6NP61 321 aa13.58□□□□□ -0.24
CIRBP-241ENST00000593048 H0YL77 283 aa13.58□□□□□ -0.24
CIRBP-241ENST00000593048 IDH3BO43837 385 aa13.58□□□□□ -0.24
CIRBP-241ENST00000593048 GASTP01350 101 aa13.58□□□□□ -0.24
CIRBP-241ENST00000593048 SMIM18P0DKX4 95 aa13.58□□□□□ -0.24
CIRBP-241ENST00000593048 ZNF823P16415 610 aa13.58□□□□□ -0.24
CIRBP-241ENST00000593048 CRHBPP24387 322 aa13.58□□□□□ -0.24
CIRBP-241ENST00000593048 SLC6A9P48067 706 aa13.58□□□□□ -0.24
CIRBP-241ENST00000593048 MMP16P51512 607 aa13.58□□□□□ -0.24
CIRBP-241ENST00000593048 TSPAN31Q12999 210 aa13.58□□□□□ -0.24
CIRBP-241ENST00000593048 ECH1Q13011 328 aa13.58□□□□□ -0.24
CIRBP-241ENST00000593048 MALLQ13021 153 aa13.58□□□□□ -0.24
CIRBP-241ENST00000593048 ZNF154Q13106 437 aa13.58□□□□□ -0.24
CIRBP-241ENST00000593048 SLC35F1Q5T1Q4 408 aa13.58□□□□□ -0.24
CIRBP-241ENST00000593048 RPL13AP3Q6NVV1 102 aa13.58□□□□□ -0.24
CIRBP-241ENST00000593048 PGBD2Q6P3X8 592 aa13.58□□□□□ -0.24
CIRBP-241ENST00000593048 C3orf56Q8N813 242 aa13.58□□□□□ -0.24
CIRBP-241ENST00000593048 SDR9C7Q8NEX9 313 aa13.58□□□□□ -0.24
CIRBP-241ENST00000593048 SLC26A10Q8NG04 563 aa13.58□□□□□ -0.24
CIRBP-241ENST00000593048 Q96MT0 163 aa13.58□□□□□ -0.24
CIRBP-241ENST00000593048 ATF6BQ99941 703 aa13.58□□□□□ -0.24
CIRBP-241ENST00000593048 FN3KQ9H479 309 aa13.58□□□□□ -0.24
CIRBP-241ENST00000593048 DDX28Q9NUL7 540 aaKnown RBP13.58□□□□□ -0.24
CIRBP-241ENST00000593048 OR5V1Q9UGF6 321 aa13.58□□□□□ -0.24
CIRBP-241ENST00000593048 PCDHGB1Q9Y5G3 927 aa13.58□□□□□ -0.24
CIRBP-241ENST00000593048 IGHV3-64DA0A0J9YX35 117 aa13.57□□□□□ -0.24
CIRBP-241ENST00000593048 IQCF6A8MYZ5 107 aa13.57□□□□□ -0.24
CIRBP-241ENST00000593048 TRAPPC2LH3BP13 241 aa13.57□□□□□ -0.24
CIRBP-241ENST00000593048 MITFO75030 526 aaPredicted RBP13.57□□□□□ -0.24
CIRBP-241ENST00000593048 ZNF205O95201 554 aa13.57□□□□□ -0.24
CIRBP-241ENST00000593048 CYB5R3P00387 301 aaPredicted RBP13.57□□□□□ -0.24
CIRBP-241ENST00000593048 LCATP04180 440 aa13.57□□□□□ -0.24
CIRBP-241ENST00000593048 TFAP2AP05549 437 aa13.57□□□□□ -0.24
CIRBP-241ENST00000593048 RPS2P15880 293 aaKnown RBP13.57□□□□□ -0.24
CIRBP-241ENST00000593048 SEC61A1P61619 476 aaKnown RBP13.57□□□□□ -0.24
CIRBP-241ENST00000593048 IL5RAQ01344 420 aa13.57□□□□□ -0.24
CIRBP-241ENST00000593048 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.57□□□□□ -0.247e-8■■□□□ 13.6
CIRBP-241ENST00000593048 DBPQ10586 325 aaPredicted RBP13.57□□□□□ -0.24
CIRBP-241ENST00000593048 CLEC12AQ5QGZ9 265 aa13.57□□□□□ -0.24
CIRBP-241ENST00000593048 SLC25A30Q5SVS4 291 aa13.57□□□□□ -0.24
CIRBP-241ENST00000593048 SLC18B1Q6NT16 456 aa13.57□□□□□ -0.24
CIRBP-241ENST00000593048 ZNF773Q6PK81 442 aa13.57□□□□□ -0.24
CIRBP-241ENST00000593048 CFAP77Q6ZQR2 320 aa13.57□□□□□ -0.24
CIRBP-241ENST00000593048 RASSF6Q6ZTQ3 369 aa13.57□□□□□ -0.24
CIRBP-241ENST00000593048 ZBTB46Q86UZ6 589 aa13.57□□□□□ -0.24
CIRBP-241ENST00000593048 MOGAT3Q86VF5 341 aa13.57□□□□□ -0.24
CIRBP-241ENST00000593048 C1orf87Q8N0U7 546 aa13.57□□□□□ -0.24
CIRBP-241ENST00000593048 DEFB108BQ8NET1 73 aa13.57□□□□□ -0.24
CIRBP-241ENST00000593048 OR52L1Q8NGH7 329 aa13.57□□□□□ -0.24
CIRBP-241ENST00000593048 RHOXF1Q8NHV9 184 aa13.57□□□□□ -0.24
CIRBP-241ENST00000593048 NIPSNAP1Q9BPW8 284 aa13.57□□□□□ -0.24
CIRBP-241ENST00000593048 SLC30A2Q9BRI3 323 aa13.57□□□□□ -0.24
CIRBP-241ENST00000593048 DYSFO75923 2080 aa13.56□□□□□ -0.24
CIRBP-241ENST00000593048 DPPA5A6NC42 116 aa13.56□□□□□ -0.24
CIRBP-241ENST00000593048 OR6C68A6NDL8 312 aa13.56□□□□□ -0.24
CIRBP-241ENST00000593048 CEACAM18A8MTB9 384 aa13.56□□□□□ -0.24
CIRBP-241ENST00000593048 F5H5P2 479 aa13.56□□□□□ -0.24
CIRBP-241ENST00000593048 ACSM4P0C7M7 580 aa13.56□□□□□ -0.24
CIRBP-241ENST00000593048 IRF2P14316 349 aa13.56□□□□□ -0.24
CIRBP-241ENST00000593048 GSSP48637 474 aa13.56□□□□□ -0.24
CIRBP-241ENST00000593048 TPTEP56180 551 aa13.56□□□□□ -0.24
CIRBP-241ENST00000593048 SLX4IPQ5VYV7 408 aa13.56□□□□□ -0.24
CIRBP-241ENST00000593048 ZNF620Q6ZNG0 422 aa13.56□□□□□ -0.24
CIRBP-241ENST00000593048 OR9Q2Q8NGE9 314 aa13.56□□□□□ -0.24
CIRBP-241ENST00000593048 SSBP3Q9BWW4 388 aaPredicted RBP13.56□□□□□ -0.24
CIRBP-241ENST00000593048 C1QTNF5Q9BXJ0 243 aa13.56□□□□□ -0.24
CIRBP-241ENST00000593048 EGLN3Q9H6Z9 239 aa13.56□□□□□ -0.24
CIRBP-241ENST00000593048 IMPAD1Q9NX62 359 aa13.56□□□□□ -0.24
CIRBP-241ENST00000593048 CYB5R1Q9UHQ9 305 aa13.56□□□□□ -0.24
CIRBP-241ENST00000593048 NUP50Q9UKX7 468 aa13.56□□□□□ -0.24
CIRBP-241ENST00000593048 POLR3KQ9Y2Y1 108 aaPredicted RBP13.56□□□□□ -0.24
CIRBP-241ENST00000593048 PPIAL4AQ9Y536 164 aa13.56□□□□□ -0.24
CIRBP-241ENST00000593048 INSIG2Q9Y5U4 225 aa13.56□□□□□ -0.24
CIRBP-241ENST00000593048 TANC2Q9HCD6 1990 aa13.56□□□□□ -0.24
CIRBP-241ENST00000593048 TMEM89A2RUT3 159 aa13.55□□□□□ -0.24
CIRBP-241ENST00000593048 SNTNA6NMZ2 147 aa13.55□□□□□ -0.24
CIRBP-241ENST00000593048 A8MXK9 166 aa13.55□□□□□ -0.24
CIRBP-241ENST00000593048 F5H0A9 414 aaPredicted RBP13.55□□□□□ -0.24
CIRBP-241ENST00000593048 ZNF701M0R085 212 aaPredicted RBP13.55□□□□□ -0.24
CIRBP-241ENST00000593048 MLNRO43193 412 aa13.55□□□□□ -0.24
CIRBP-241ENST00000593048 CLIC3O95833 236 aa13.55□□□□□ -0.24
CIRBP-241ENST00000593048 FSHBP01225 129 aa13.55□□□□□ -0.24
CIRBP-241ENST00000593048 HLA-DPB1P04440 258 aa13.55□□□□□ -0.24
CIRBP-241ENST00000593048 WNT2P09544 360 aa13.55□□□□□ -0.24
CIRBP-241ENST00000593048 ZNF12P17014 697 aa13.55□□□□□ -0.24
CIRBP-241ENST00000593048 JUNBP17275 347 aaPredicted RBP13.55□□□□□ -0.24
CIRBP-241ENST00000593048 ALDH3B2P48448 385 aa13.55□□□□□ -0.24
CIRBP-241ENST00000593048 COMPP49747 757 aaPredicted RBP13.55□□□□□ -0.24
CIRBP-241ENST00000593048 PRSS12P56730 875 aa13.55□□□□□ -0.24
CIRBP-241ENST00000593048 SNRPGP62308 76 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms