RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 GK3PQ14409 553 aa15.68■□□□□ 0.1
CCDC43-205ENST00000592333 SNAI3Q3KNW1 292 aa15.68■□□□□ 0.1
CCDC43-205ENST00000592333 PRAMEF6Q5VXH4 476 aa15.68■□□□□ 0.1
CCDC43-205ENST00000592333 Q6YL49 198 aa15.68■□□□□ 0.1
CCDC43-205ENST00000592333 DCXRQ7Z4W1 244 aa15.68■□□□□ 0.1
CCDC43-205ENST00000592333 SLC37A3Q8NCC5 494 aa15.68■□□□□ 0.1
CCDC43-205ENST00000592333 BTBD10Q9BSF8 475 aa15.68■□□□□ 0.1
CCDC43-205ENST00000592333 COPS4Q9BT78 406 aa15.68■□□□□ 0.1
CCDC43-205ENST00000592333 NMNAT2Q9BZQ4 307 aa15.68■□□□□ 0.1
CCDC43-205ENST00000592333 MUC13Q9H3R2 512 aa15.68■□□□□ 0.1
CCDC43-205ENST00000592333 TOR3AQ9H497 397 aa15.68■□□□□ 0.1
CCDC43-205ENST00000592333 KAAG1Q9UBP8 84 aa15.68■□□□□ 0.1
CCDC43-205ENST00000592333 POMT1Q9Y6A1 747 aa15.68■□□□□ 0.1
CCDC43-205ENST00000592333 ZNF878C9JN71 531 aa15.67■□□□□ 0.1
CCDC43-205ENST00000592333 CCNB2O95067 398 aa15.67■□□□□ 0.1
CCDC43-205ENST00000592333 GASTP01350 101 aa15.67■□□□□ 0.1
CCDC43-205ENST00000592333 CFL1P23528 166 aaKnown RBP15.67■□□□□ 0.1
CCDC43-205ENST00000592333 PYCR1P32322 319 aa15.67■□□□□ 0.1
CCDC43-205ENST00000592333 GRK5P34947 590 aa15.67■□□□□ 0.1
CCDC43-205ENST00000592333 MSX2P35548 267 aaPredicted RBP15.67■□□□□ 0.1
CCDC43-205ENST00000592333 PDCD1Q15116 288 aa15.67■□□□□ 0.1
CCDC43-205ENST00000592333 TAF13Q15543 124 aa15.67■□□□□ 0.1
CCDC43-205ENST00000592333 SNCBQ16143 134 aa15.67■□□□□ 0.1
CCDC43-205ENST00000592333 OCLNQ16625 522 aa15.67■□□□□ 0.1
CCDC43-205ENST00000592333 GLYATL3Q5SZD4 288 aa15.67■□□□□ 0.1
CCDC43-205ENST00000592333 CYB561A3Q8NBI2 242 aa15.67■□□□□ 0.1
CCDC43-205ENST00000592333 OR2T33Q8NG76 320 aa15.67■□□□□ 0.1
CCDC43-205ENST00000592333 ZDHHC16Q969W1 377 aa15.67■□□□□ 0.1
CCDC43-205ENST00000592333 TMIGD2Q96BF3 282 aa15.67■□□□□ 0.1
CCDC43-205ENST00000592333 SLAMF6Q96DU3 332 aa15.67■□□□□ 0.1
CCDC43-205ENST00000592333 DGCR6LQ9BY27 220 aa15.67■□□□□ 0.1
CCDC43-205ENST00000592333 RNPEPL1Q9HAU8 725 aa15.67■□□□□ 0.1
CCDC43-205ENST00000592333 ARL2BPQ9Y2Y0 163 aa15.67■□□□□ 0.1
CCDC43-205ENST00000592333 C22orf46C9J442 243 aa15.66■□□□□ 0.1
CCDC43-205ENST00000592333 ZNF593O00488 134 aaPredicted RBP15.66■□□□□ 0.1
CCDC43-205ENST00000592333 WIPF1O43516 503 aa15.66■□□□□ 0.1
CCDC43-205ENST00000592333 TIPRLO75663 272 aa15.66■□□□□ 0.1
CCDC43-205ENST00000592333 LHBP01229 141 aa15.66■□□□□ 0.1
CCDC43-205ENST00000592333 IFNGP01579 166 aa15.66■□□□□ 0.1
CCDC43-205ENST00000592333 CFHR2P36980 270 aa15.66■□□□□ 0.1
CCDC43-205ENST00000592333 PRSS12P56730 875 aa15.66■□□□□ 0.1
CCDC43-205ENST00000592333 DEFB112Q30KQ8 113 aa15.66■□□□□ 0.1
CCDC43-205ENST00000592333 TEX36Q5VZQ5 186 aa15.66■□□□□ 0.1
CCDC43-205ENST00000592333 DEFB107AQ8IZN7 70 aa15.66■□□□□ 0.1
CCDC43-205ENST00000592333 OR9Q2Q8NGE9 314 aa15.66■□□□□ 0.1
CCDC43-205ENST00000592333 OR2AE1Q8NHA4 323 aa15.66■□□□□ 0.1
CCDC43-205ENST00000592333 TSSK6Q9BXA6 273 aa15.66■□□□□ 0.1
CCDC43-205ENST00000592333 FAM107BQ9H098 131 aa15.66■□□□□ 0.1
CCDC43-205ENST00000592333 MMADHCQ9H3L0 296 aaPredicted RBP15.66■□□□□ 0.1
CCDC43-205ENST00000592333 IGHV3OR16-10A0A075B7F0 116 aa15.65■□□□□ 0.1
CCDC43-205ENST00000592333 TVP23AA6NH52 213 aa15.65■□□□□ 0.1
CCDC43-205ENST00000592333 ANKRD30BLA7E2S9 258 aa15.65■□□□□ 0.1
CCDC43-205ENST00000592333 GPR37O15354 613 aa15.65■□□□□ 0.1
CCDC43-205ENST00000592333 HOXA3O43365 443 aaPredicted RBP15.65■□□□□ 0.1
CCDC43-205ENST00000592333 ADAM20O43506 726 aa15.65■□□□□ 0.1
CCDC43-205ENST00000592333 TOX4O94842 621 aa15.65■□□□□ 0.1
CCDC43-205ENST00000592333 MMP9P14780 707 aa15.65■□□□□ 0.1
CCDC43-205ENST00000592333 MUC1P15941 1255 aaPredicted RBP15.65■□□□□ 0.1
CCDC43-205ENST00000592333 SPI1P17947 270 aa15.65■□□□□ 0.1
CCDC43-205ENST00000592333 OR8B8Q15620 311 aa15.65■□□□□ 0.1
CCDC43-205ENST00000592333 METTL11BQ5VVY1 283 aa15.65■□□□□ 0.1
CCDC43-205ENST00000592333 CD300LDQ6UXZ3 194 aa15.65■□□□□ 0.1
CCDC43-205ENST00000592333 PIGWQ7Z7B1 504 aa15.65■□□□□ 0.1
CCDC43-205ENST00000592333 OR52H1Q8NGJ2 320 aa15.65■□□□□ 0.1
CCDC43-205ENST00000592333 OR8D4Q8NGM9 314 aa15.65■□□□□ 0.1
CCDC43-205ENST00000592333 OR4F5Q8NH21 305 aa15.65■□□□□ 0.1
CCDC43-205ENST00000592333 ZNRF4Q8WWF5 429 aa15.65■□□□□ 0.1
CCDC43-205ENST00000592333 GATAD2BQ8WXI9 593 aa15.65■□□□□ 0.1
CCDC43-205ENST00000592333 WDFY2Q96P53 400 aa15.65■□□□□ 0.1
CCDC43-205ENST00000592333 TECTBQ96PL2 329 aa15.65■□□□□ 0.1
CCDC43-205ENST00000592333 BEX1Q9HBH7 125 aa15.65■□□□□ 0.1
CCDC43-205ENST00000592333 TBC1D23Q9NUY8 699 aa15.65■□□□□ 0.1
CCDC43-205ENST00000592333 ARL8BQ9NVJ2 186 aa15.65■□□□□ 0.1
CCDC43-205ENST00000592333 C1orf123Q9NWV4 160 aa15.65■□□□□ 0.1
CCDC43-205ENST00000592333 CTSZQ9UBR2 303 aa15.65■□□□□ 0.1
CCDC43-205ENST00000592333 NDUFA7O95182 113 aa15.64■□□□□ 0.09
CCDC43-205ENST00000592333 CRYBA1P05813 215 aa15.64■□□□□ 0.09
CCDC43-205ENST00000592333 SPARCP09486 303 aa15.64■□□□□ 0.09
CCDC43-205ENST00000592333 RPS27P42677 84 aaKnown RBP15.64■□□□□ 0.09
CCDC43-205ENST00000592333 MXRA7P84157 204 aa15.64■□□□□ 0.09
CCDC43-205ENST00000592333 DBPQ10586 325 aaPredicted RBP15.64■□□□□ 0.09
CCDC43-205ENST00000592333 CRMP1Q14194 572 aa15.64■□□□□ 0.09
CCDC43-205ENST00000592333 MICAQ29983 383 aa15.64■□□□□ 0.09
CCDC43-205ENST00000592333 SFRP4Q6FHJ7 346 aaPredicted RBP15.64■□□□□ 0.09
CCDC43-205ENST00000592333 BRD3OSQ6XYD6 125 aa15.64■□□□□ 0.09
CCDC43-205ENST00000592333 SPATC1Q76KD6 591 aa15.64■□□□□ 0.09
CCDC43-205ENST00000592333 FTMTQ8N4E7 242 aa15.64■□□□□ 0.09
CCDC43-205ENST00000592333 GCSAMQ8N6F7 178 aa15.64■□□□□ 0.09
CCDC43-205ENST00000592333 OR56B2PQ8NGI1 322 aa15.64■□□□□ 0.09
CCDC43-205ENST00000592333 C12orf43Q96C57 262 aaKnown RBP15.64■□□□□ 0.09
CCDC43-205ENST00000592333 PCGF1Q9BSM1 259 aa15.64■□□□□ 0.09
CCDC43-205ENST00000592333 RGCCQ9H4X1 137 aa15.64■□□□□ 0.09
CCDC43-205ENST00000592333 CENPMQ9NSP4 180 aa15.64■□□□□ 0.09
CCDC43-205ENST00000592333 CENPVL3A0A0U1RRI6 287 aa15.63■□□□□ 0.09
CCDC43-205ENST00000592333 RIIAD1A6NNX1 92 aa15.63■□□□□ 0.09
CCDC43-205ENST00000592333 C3orf80F5H4A9 247 aa15.63■□□□□ 0.09
CCDC43-205ENST00000592333 ZNF3P17036 446 aa15.63■□□□□ 0.09
CCDC43-205ENST00000592333 PRKXP51817 358 aa15.63■□□□□ 0.09
CCDC43-205ENST00000592333 MICBQ29980 383 aa15.63■□□□□ 0.09
CCDC43-205ENST00000592333 LCN8Q6JVE9 175 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms