RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 MRAPQ8TCY5 172 aa13.08□□□□□ -0.32
DDX39A-216ENST00000591275 SLC7A6OSQ96CW6 309 aaPredicted RBP13.08□□□□□ -0.32
DDX39A-216ENST00000591275 PPA2Q9H2U2 334 aa13.08□□□□□ -0.32
DDX39A-216ENST00000591275 CNTD2Q9H8S5 307 aa13.08□□□□□ -0.32
DDX39A-216ENST00000591275 NRIP3Q9NQ35 241 aa13.08□□□□□ -0.32
DDX39A-216ENST00000591275 SIRT7Q9NRC8 400 aa13.08□□□□□ -0.32
DDX39A-216ENST00000591275 DUX4Q9UBX2 424 aa13.08□□□□□ -0.32
DDX39A-216ENST00000591275 RPUSD1Q9UJJ7 312 aaKnown RBP13.08□□□□□ -0.32
DDX39A-216ENST00000591275 KMT2CQ8NEZ4 4911 aaKnown RBP13.08□□□□□ -0.32
DDX39A-216ENST00000591275 A0A1B0GVI7 797 aa13.07□□□□□ -0.32
DDX39A-216ENST00000591275 hCG_1807616A0A1W2PRN6 198 aa13.07□□□□□ -0.32
DDX39A-216ENST00000591275 A6NLC8 198 aa13.07□□□□□ -0.32
DDX39A-216ENST00000591275 CD300LBA8K4G0 201 aa13.07□□□□□ -0.32
DDX39A-216ENST00000591275 FAM220BPB1ANY3 271 aa13.07□□□□□ -0.32
DDX39A-216ENST00000591275 ANKRD65E5RJM6 399 aa13.07□□□□□ -0.32
DDX39A-216ENST00000591275 MRASO14807 208 aa13.07□□□□□ -0.32
DDX39A-216ENST00000591275 NDUFA2O43678 99 aa13.07□□□□□ -0.32
DDX39A-216ENST00000591275 ECDO95905 644 aaPredicted RBP13.07□□□□□ -0.32
DDX39A-216ENST00000591275 GRPP07492 148 aa13.07□□□□□ -0.32
DDX39A-216ENST00000591275 GABRA5P31644 462 aa13.07□□□□□ -0.32
DDX39A-216ENST00000591275 SF3A3Q12874 501 aaKnown RBP eCLIP13.07□□□□□ -0.329e-6■■□□□ 12.4
DDX39A-216ENST00000591275 TRAP1Q12931 704 aaKnown RBP13.07□□□□□ -0.32
DDX39A-216ENST00000591275 HERPUD1Q15011 391 aa13.07□□□□□ -0.32
DDX39A-216ENST00000591275 GCSAMQ8N6F7 178 aa13.07□□□□□ -0.32
DDX39A-216ENST00000591275 OR2T12Q8NG77 320 aa13.07□□□□□ -0.32
DDX39A-216ENST00000591275 ATF6BQ99941 703 aa13.07□□□□□ -0.32
DDX39A-216ENST00000591275 BTBD10Q9BSF8 475 aa13.07□□□□□ -0.32
DDX39A-216ENST00000591275 TOR3AQ9H497 397 aa13.07□□□□□ -0.32
DDX39A-216ENST00000591275 SRA1Q9HD15 236 aaKnown RBP13.07□□□□□ -0.32
DDX39A-216ENST00000591275 TRIM36Q9NQ86 728 aa13.07□□□□□ -0.32
DDX39A-216ENST00000591275 GMPR2Q9P2T1 348 aaKnown RBP13.07□□□□□ -0.32
DDX39A-216ENST00000591275 TAGLN3Q9UI15 199 aa13.07□□□□□ -0.32
DDX39A-216ENST00000591275 SIGLEC7Q9Y286 467 aa13.07□□□□□ -0.32
DDX39A-216ENST00000591275 KPTNQ9Y664 436 aa13.07□□□□□ -0.32
DDX39A-216ENST00000591275 IGLV1-36A0A0B4J1U3 117 aa13.06□□□□□ -0.32
DDX39A-216ENST00000591275 PTP4A3O75365 173 aa13.06□□□□□ -0.32
DDX39A-216ENST00000591275 PTBP3O95758 552 aaKnown RBP13.06□□□□□ -0.32
DDX39A-216ENST00000591275 ZNF682O95780 498 aa13.06□□□□□ -0.32
DDX39A-216ENST00000591275 ANOS1P23352 680 aa13.06□□□□□ -0.32
DDX39A-216ENST00000591275 CRABP1P29762 137 aa13.06□□□□□ -0.32
DDX39A-216ENST00000591275 KLRD1Q13241 179 aa13.06□□□□□ -0.32
DDX39A-216ENST00000591275 SLC18B1Q6NT16 456 aa13.06□□□□□ -0.32
DDX39A-216ENST00000591275 PGM2L1Q6PCE3 622 aa13.06□□□□□ -0.32
DDX39A-216ENST00000591275 C1orf122Q6ZSJ8 110 aa13.06□□□□□ -0.32
DDX39A-216ENST00000591275 REC114Q7Z4M0 266 aa13.06□□□□□ -0.32
DDX39A-216ENST00000591275 C10orf67Q8IYJ2 551 aa13.06□□□□□ -0.32
DDX39A-216ENST00000591275 PNKDQ8N490 385 aa13.06□□□□□ -0.32
DDX39A-216ENST00000591275 GALNT4Q8N4A0 578 aa13.06□□□□□ -0.32
DDX39A-216ENST00000591275 OR2AE1Q8NHA4 323 aa13.06□□□□□ -0.32
DDX39A-216ENST00000591275 CMTM5Q96DZ9 223 aa13.06□□□□□ -0.32
DDX39A-216ENST00000591275 GPX7Q96SL4 187 aaPredicted RBP13.06□□□□□ -0.32
DDX39A-216ENST00000591275 SLC22A4Q9H015 551 aa13.06□□□□□ -0.32
DDX39A-216ENST00000591275 FOXJ3Q9UPW0 622 aa13.06□□□□□ -0.32
DDX39A-216ENST00000591275 TMEM5Q9Y2B1 443 aa13.06□□□□□ -0.32
DDX39A-216ENST00000591275 CAB39Q9Y376 341 aaPredicted RBP13.06□□□□□ -0.32
DDX39A-216ENST00000591275 NOP16Q9Y3C1 178 aaKnown RBP13.06□□□□□ -0.32
DDX39A-216ENST00000591275 TENM3Q9P273 2699 aa13.06□□□□□ -0.32
DDX39A-216ENST00000591275 COL7A1Q02388 2944 aa13.05□□□□□ -0.32
DDX39A-216ENST00000591275 RNASEK-C17orf49H0YIS7 233 aa13.05□□□□□ -0.32
DDX39A-216ENST00000591275 NPFFO15130 113 aa13.05□□□□□ -0.32
DDX39A-216ENST00000591275 GPR37O15354 613 aa13.05□□□□□ -0.32
DDX39A-216ENST00000591275 GMDSO60547 372 aa13.05□□□□□ -0.32
DDX39A-216ENST00000591275 PPP1R3DO95685 299 aa13.05□□□□□ -0.32
DDX39A-216ENST00000591275 EEF1B2P24534 225 aaKnown RBP13.05□□□□□ -0.32
DDX39A-216ENST00000591275 GGT2P36268 569 aa13.05□□□□□ -0.32
DDX39A-216ENST00000591275 FXYD6P3P58550 94 aa13.05□□□□□ -0.32
DDX39A-216ENST00000591275 ZNF92Q03936 586 aa13.05□□□□□ -0.32
DDX39A-216ENST00000591275 SNAI3Q3KNW1 292 aa13.05□□□□□ -0.32
DDX39A-216ENST00000591275 DNM1P34Q6PK57 102 aa13.05□□□□□ -0.32
DDX39A-216ENST00000591275 OR6V1Q8N148 313 aa13.05□□□□□ -0.32
DDX39A-216ENST00000591275 ARHGAP24Q8N264 748 aa13.05□□□□□ -0.32
DDX39A-216ENST00000591275 LNX2Q8N448 690 aa13.05□□□□□ -0.32
DDX39A-216ENST00000591275 PLPP7Q8NBV4 271 aa13.05□□□□□ -0.32
DDX39A-216ENST00000591275 SLC26A10Q8NG04 563 aa13.05□□□□□ -0.32
DDX39A-216ENST00000591275 ITPKCQ96DU7 683 aa13.05□□□□□ -0.32
DDX39A-216ENST00000591275 CCL13Q99616 98 aa13.05□□□□□ -0.32
DDX39A-216ENST00000591275 ARL8BQ9NVJ2 186 aa13.05□□□□□ -0.32
DDX39A-216ENST00000591275 ADA2Q9NZK5 511 aa13.05□□□□□ -0.32
DDX39A-216ENST00000591275 FBLN5Q9UBX5 448 aa13.05□□□□□ -0.32
DDX39A-216ENST00000591275 B9D1Q9UPM9 204 aa13.05□□□□□ -0.32
DDX39A-216ENST00000591275 AURKCQ9UQB9 309 aa13.05□□□□□ -0.32
DDX39A-216ENST00000591275 GGT3PA6NGU5 568 aa13.04□□□□□ -0.32
DDX39A-216ENST00000591275 PAHP00439 452 aa13.04□□□□□ -0.32
DDX39A-216ENST00000591275 RPS6KA3P51812 740 aa13.04□□□□□ -0.32
DDX39A-216ENST00000591275 TPTEP56180 551 aa13.04□□□□□ -0.32
DDX39A-216ENST00000591275 LOXL3P58215 753 aa13.04□□□□□ -0.32
DDX39A-216ENST00000591275 ECH1Q13011 328 aa13.04□□□□□ -0.32
DDX39A-216ENST00000591275 IFI44LQ53G44 452 aa13.04□□□□□ -0.32
DDX39A-216ENST00000591275 OXLD1Q5BKU9 147 aa13.04□□□□□ -0.32
DDX39A-216ENST00000591275 DPY19L2P2Q6ZN68 376 aa13.04□□□□□ -0.32
DDX39A-216ENST00000591275 TSEN54Q7Z6J9 526 aaKnown RBP13.04□□□□□ -0.32
DDX39A-216ENST00000591275 LYG1Q8N1E2 194 aa13.04□□□□□ -0.32
DDX39A-216ENST00000591275 FAM216BQ8N7L0 139 aa13.04□□□□□ -0.32
DDX39A-216ENST00000591275 LY6G5BQ8NDX9 201 aa13.04□□□□□ -0.32
DDX39A-216ENST00000591275 OR2AJ1Q8NGZ0 328 aa13.04□□□□□ -0.32
DDX39A-216ENST00000591275 PPP1R35Q8TAP8 253 aa13.04□□□□□ -0.32
DDX39A-216ENST00000591275 SLC7A13Q8TCU3 470 aa13.04□□□□□ -0.32
DDX39A-216ENST00000591275 NPRL2Q8WTW4 380 aa13.04□□□□□ -0.32
DDX39A-216ENST00000591275 RSRC1Q96IZ7 334 aaKnown RBP13.04□□□□□ -0.32
DDX39A-216ENST00000591275 PNRC2Q9NPJ4 139 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms