RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 NR4A2P43354 598 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 LGALS7P47929 136 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 GP2P55259 537 aaKnown RBP5.58□□□□□ -1.52
SMAD4-212ENST00000591126 POU4F3Q15319 338 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 DCAF12L2Q5VW00 463 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 ADGRE4PQ86SQ3 457 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 DEFB108BQ8NET1 73 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 OR51D1Q8NGF3 324 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 SGK3Q96BR1 496 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 S100PBPQ96BU1 408 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 SLC35E1Q96K37 410 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 EMC6Q9BV81 110 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 ZNF703Q9H7S9 590 aaPredicted RBP5.58□□□□□ -1.52
SMAD4-212ENST00000591126 LIN7CQ9NUP9 197 aaKnown RBP5.58□□□□□ -1.52
SMAD4-212ENST00000591126 GPATCH2Q9NW75 528 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 ZNF222Q9UK12 451 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 RHBDD3Q9Y3P4 386 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 KANTRA0A1W2PQU2 76 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 ZNF736B4DX44 427 aaPredicted RBP5.58□□□□□ -1.52
SMAD4-212ENST00000591126 LGALS8O00214 317 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 PRAF2O60831 178 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 ALDOCP09972 364 aaKnown RBP5.58□□□□□ -1.52
SMAD4-212ENST00000591126 AKAIN1P0CW23 69 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 PIPP12273 146 aaPredicted RBP5.58□□□□□ -1.52
SMAD4-212ENST00000591126 SOX18P35713 384 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 GLRXP35754 106 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 HOXA4Q00056 320 aaPredicted RBP5.58□□□□□ -1.52
SMAD4-212ENST00000591126 CRMP1Q14194 572 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 C3AR1Q16581 482 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 DUSP7Q16829 419 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 SP5Q6BEB4 398 aaPredicted RBP5.58□□□□□ -1.52
SMAD4-212ENST00000591126 KCNIP4Q6PIL6 250 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 GSG1LQ6UXU4 331 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 HMGN2P46Q86SG4 172 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 CXorf67Q86X51 503 aaPredicted RBP5.58□□□□□ -1.52
SMAD4-212ENST00000591126 OR5A2Q8NGI9 324 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 OR13C9Q8NGT0 318 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 LRRC29Q8WV35 223 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 ATP5SQ99766 215 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 DCSTAMPQ9H295 470 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 GPR27Q9NS67 375 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 C1orf123Q9NWV4 160 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 SMCO3A2RU48 225 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 GSTZ1O43708 216 aaPredicted RBP5.58□□□□□ -1.52
SMAD4-212ENST00000591126 IL1AP01583 271 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 ZNF32P17041 273 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 PEBP1P30086 187 aaKnown RBP5.58□□□□□ -1.52
SMAD4-212ENST00000591126 HOXA1P49639 335 aaPredicted RBP5.58□□□□□ -1.52
SMAD4-212ENST00000591126 COMPP49747 757 aaPredicted RBP5.58□□□□□ -1.52
SMAD4-212ENST00000591126 HOXC5Q00444 222 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 SLC17A1Q14916 467 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 LAPTM4AQ15012 233 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 ACSF3Q4G176 576 aaPredicted RBP5.58□□□□□ -1.52
SMAD4-212ENST00000591126 OR2W3Q7Z3T1 314 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 CDH26Q8IXH8 852 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 LILRB4Q8NHJ6 448 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 PBOV1Q9GZY1 135 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 ENAMQ9NRM1 1142 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 MRPL15Q9P015 296 aaKnown RBP5.58□□□□□ -1.52
SMAD4-212ENST00000591126 ICAM5Q9UMF0 924 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 DOCK3Q8IZD9 2030 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 A0A1W2PNV4 684 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 A6NHS1 94 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 NOTOA8MTQ0 251 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 DHRS3O75911 302 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 CCR9P51686 369 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 PNLIPRP3Q17RR3 467 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 C6orf52Q5T4I8 152 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 FAM166AQ6J272 317 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 MOB3BQ86TA1 216 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 CCDC71Q8IV32 467 aaPredicted RBP5.58□□□□□ -1.52
SMAD4-212ENST00000591126 SAMD12Q8N8I0 201 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 OR9Q2Q8NGE9 314 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 OR1K1Q8NGR3 316 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 OR5R1Q8NH85 324 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 NPRL2Q8WTW4 380 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 ISOC1Q96CN7 298 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 DOK1Q99704 481 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 TIMP4Q99727 224 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 EMC7Q9NPA0 242 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 NOX4Q9NPH5 578 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 SLC17A5Q9NRA2 495 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 SLCO1B1Q9Y6L6 691 aa5.58□□□□□ -1.52
SMAD4-212ENST00000591126 TRBV23-1A0A0A0MS06 115 aa5.57□□□□□ -1.52
SMAD4-212ENST00000591126 IGHV3-15A0A0B4J1V0 119 aa5.57□□□□□ -1.52
SMAD4-212ENST00000591126 TCRBV3S1A0A5B6 114 aa5.57□□□□□ -1.52
SMAD4-212ENST00000591126 F6UZH7 168 aa5.57□□□□□ -1.52
SMAD4-212ENST00000591126 PCSK6P29122 969 aa5.57□□□□□ -1.52
SMAD4-212ENST00000591126 ERP29P30040 261 aaKnown RBP5.57□□□□□ -1.52
SMAD4-212ENST00000591126 DCTDP32321 178 aa5.57□□□□□ -1.52
SMAD4-212ENST00000591126 CMC4P56277 68 aaPredicted RBP5.57□□□□□ -1.52
SMAD4-212ENST00000591126 BPIFB3P59826 476 aa5.57□□□□□ -1.52
SMAD4-212ENST00000591126 DHODHQ02127 395 aa5.57□□□□□ -1.52
SMAD4-212ENST00000591126 DOC2BQ14184 412 aa5.57□□□□□ -1.52
SMAD4-212ENST00000591126 ZNF273Q14593 569 aa5.57□□□□□ -1.52
SMAD4-212ENST00000591126 FAM27BQ5VT28 67 aa5.57□□□□□ -1.52
SMAD4-212ENST00000591126 METAP1DQ6UB28 335 aaPredicted RBP5.57□□□□□ -1.52
SMAD4-212ENST00000591126 CATSPERDQ86XM0 798 aa5.57□□□□□ -1.52
SMAD4-212ENST00000591126 RBMXL3Q8N7X1 1067 aaKnown RBP5.57□□□□□ -1.52
SMAD4-212ENST00000591126 ZNF615Q8N8J6 731 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms