RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 LILRA1O75019 489 aa10.08□□□□□ -0.8
LIG3-213ENST00000590630 OR2T7P0C7T2 308 aa10.08□□□□□ -0.8
LIG3-213ENST00000590630 ATP6V1E1P36543 226 aa10.08□□□□□ -0.8
LIG3-213ENST00000590630 MTNR1AP48039 350 aa10.08□□□□□ -0.8
LIG3-213ENST00000590630 SRP9P49458 86 aaKnown RBP10.08□□□□□ -0.8
LIG3-213ENST00000590630 RIDAP52758 137 aaKnown RBP10.08□□□□□ -0.8
LIG3-213ENST00000590630 PRSS12P56730 875 aa10.08□□□□□ -0.8
LIG3-213ENST00000590630 EGR3Q06889 387 aa10.08□□□□□ -0.8
LIG3-213ENST00000590630 OCLNQ16625 522 aa10.08□□□□□ -0.8
LIG3-213ENST00000590630 ZNF829Q3KNS6 432 aaPredicted RBP10.08□□□□□ -0.8
LIG3-213ENST00000590630 ZNF322Q6U7Q0 402 aaPredicted RBP10.08□□□□□ -0.8
LIG3-213ENST00000590630 OR10AD1Q8NGE0 317 aa10.08□□□□□ -0.8
LIG3-213ENST00000590630 OR2T27Q8NH04 317 aa10.08□□□□□ -0.8
LIG3-213ENST00000590630 CCL17Q92583 94 aa10.08□□□□□ -0.8
LIG3-213ENST00000590630 UBE2FQ969M7 185 aa10.08□□□□□ -0.8
LIG3-213ENST00000590630 SGK3Q96BR1 496 aa10.08□□□□□ -0.8
LIG3-213ENST00000590630 TIMD4Q96H15 378 aa10.08□□□□□ -0.8
LIG3-213ENST00000590630 REEP6Q96HR9 211 aa10.08□□□□□ -0.8
LIG3-213ENST00000590630 PGAM5Q96HS1 289 aa10.08□□□□□ -0.8
LIG3-213ENST00000590630 OR2V2Q96R30 315 aa10.08□□□□□ -0.8
LIG3-213ENST00000590630 BRD7Q9NPI1 651 aa10.08□□□□□ -0.8
LIG3-213ENST00000590630 FAM118AQ9NWS6 357 aa10.08□□□□□ -0.8
LIG3-213ENST00000590630 IKZF2Q9UKS7 526 aa10.08□□□□□ -0.8
LIG3-213ENST00000590630 hCG_38984A0A1B0GV85 526 aa10.07□□□□□ -0.8
LIG3-213ENST00000590630 TMEM269A0A1B0GVZ9 245 aa10.07□□□□□ -0.8
LIG3-213ENST00000590630 ERICH4A6NGS2 130 aa10.07□□□□□ -0.8
LIG3-213ENST00000590630 PRR32B1ATL7 298 aa10.07□□□□□ -0.8
LIG3-213ENST00000590630 IFNL4K9M1U5 179 aa10.07□□□□□ -0.8
LIG3-213ENST00000590630 PSMD9O00233 223 aa10.07□□□□□ -0.8
LIG3-213ENST00000590630 GMDSO60547 372 aa10.07□□□□□ -0.8
LIG3-213ENST00000590630 ENTPD6O75354 484 aa10.07□□□□□ -0.8
LIG3-213ENST00000590630 PEX2P28328 305 aa10.07□□□□□ -0.8
LIG3-213ENST00000590630 GZMKP49863 264 aa10.07□□□□□ -0.8
LIG3-213ENST00000590630 MMP16P51512 607 aa10.07□□□□□ -0.8
LIG3-213ENST00000590630 FAM3AP98173 230 aa10.07□□□□□ -0.8
LIG3-213ENST00000590630 SNCBQ16143 134 aa10.07□□□□□ -0.8
LIG3-213ENST00000590630 LRRC36Q1X8D7 754 aa10.07□□□□□ -0.8
LIG3-213ENST00000590630 PEG10Q86TG7 708 aaKnown RBP10.07□□□□□ -0.8
LIG3-213ENST00000590630 KLBQ86Z14 1044 aa10.07□□□□□ -0.8
LIG3-213ENST00000590630 FTMTQ8N4E7 242 aa10.07□□□□□ -0.8
LIG3-213ENST00000590630 RFLNBQ8N5W9 214 aa10.07□□□□□ -0.8
LIG3-213ENST00000590630 CELF2-AS1Q8N7Q2 184 aa10.07□□□□□ -0.8
LIG3-213ENST00000590630 ZNF555Q8NEP9 628 aa10.07□□□□□ -0.8
LIG3-213ENST00000590630 OR56B2PQ8NGI1 322 aa10.07□□□□□ -0.8
LIG3-213ENST00000590630 ITLN1Q8WWA0 313 aa10.07□□□□□ -0.8
LIG3-213ENST00000590630 RAB1CQ92928 201 aa10.07□□□□□ -0.8
LIG3-213ENST00000590630 ITFG2Q969R8 447 aa10.07□□□□□ -0.8
LIG3-213ENST00000590630 MEGF10Q96KG7 1140 aa10.07□□□□□ -0.8
LIG3-213ENST00000590630 Q96MT0 163 aa10.07□□□□□ -0.8
LIG3-213ENST00000590630 APOL4Q9BPW4 351 aa10.07□□□□□ -0.8
LIG3-213ENST00000590630 DCLRE1BQ9H816 532 aa10.07□□□□□ -0.8
LIG3-213ENST00000590630 FAM206AQ9NX38 181 aa10.07□□□□□ -0.8
LIG3-213ENST00000590630 ZNF319Q9P2F9 582 aa10.07□□□□□ -0.8
LIG3-213ENST00000590630 PPP1R3CQ9UQK1 317 aa10.07□□□□□ -0.8
LIG3-213ENST00000590630 CACNG2Q9Y698 323 aa10.07□□□□□ -0.8
LIG3-213ENST00000590630 NAV3Q8IVL0 2385 aa10.06□□□□□ -0.8
LIG3-213ENST00000590630 A0A0U1RQV5 110 aa10.06□□□□□ -0.8
LIG3-213ENST00000590630 A0A1W2PQL4 384 aaPredicted RBP10.06□□□□□ -0.8
LIG3-213ENST00000590630 LRP5LA4QPB2 252 aa10.06□□□□□ -0.8
LIG3-213ENST00000590630 ANKRD30BLA7E2S9 258 aa10.06□□□□□ -0.8
LIG3-213ENST00000590630 F5H5P2 479 aa10.06□□□□□ -0.8
LIG3-213ENST00000590630 H0YL77 283 aa10.06□□□□□ -0.8
LIG3-213ENST00000590630 DLGAP1O14490 977 aa10.06□□□□□ -0.8
LIG3-213ENST00000590630 CASQ2O14958 399 aaPredicted RBP10.06□□□□□ -0.8
LIG3-213ENST00000590630 HLA-DPB1P04440 258 aa10.06□□□□□ -0.8
LIG3-213ENST00000590630 IGHV4-31P0DP07 118 aa10.06□□□□□ -0.8
LIG3-213ENST00000590630 GABRB1P18505 474 aa10.06□□□□□ -0.8
LIG3-213ENST00000590630 CA6P23280 308 aa10.06□□□□□ -0.8
LIG3-213ENST00000590630 GATA4P43694 442 aa10.06□□□□□ -0.8
LIG3-213ENST00000590630 GSK3AP49840 483 aa10.06□□□□□ -0.8
LIG3-213ENST00000590630 ACTC1P68032 377 aa10.06□□□□□ -0.8
LIG3-213ENST00000590630 ACTA1P68133 377 aa10.06□□□□□ -0.8
LIG3-213ENST00000590630 ELF3P78545 371 aaPredicted RBP10.06□□□□□ -0.8
LIG3-213ENST00000590630 OR8G1Q15617 311 aa10.06□□□□□ -0.8
LIG3-213ENST00000590630 OR8B8Q15620 311 aa10.06□□□□□ -0.8
LIG3-213ENST00000590630 GFOD2Q3B7J2 385 aa10.06□□□□□ -0.8
LIG3-213ENST00000590630 SPRNQ5BIV9 151 aa10.06□□□□□ -0.8
LIG3-213ENST00000590630 LPCAT4Q643R3 524 aa10.06□□□□□ -0.8
LIG3-213ENST00000590630 CYB5R2Q6BCY4 276 aa10.06□□□□□ -0.8
LIG3-213ENST00000590630 Q71RC1 249 aaPredicted RBP10.06□□□□□ -0.8
LIG3-213ENST00000590630 ENTHD1Q8IYW4 607 aa10.06□□□□□ -0.8
LIG3-213ENST00000590630 GALNT4Q8N4A0 578 aa10.06□□□□□ -0.8
LIG3-213ENST00000590630 CSNK2A3Q8NEV1 391 aa10.06□□□□□ -0.8
LIG3-213ENST00000590630 OR10H4Q8NGA5 316 aa10.06□□□□□ -0.8
LIG3-213ENST00000590630 OR8B12Q8NGG6 310 aa10.06□□□□□ -0.8
LIG3-213ENST00000590630 RHOXF1Q8NHV9 184 aa10.06□□□□□ -0.8
LIG3-213ENST00000590630 ADAT1Q9BUB4 502 aaKnown RBP10.06□□□□□ -0.8
LIG3-213ENST00000590630 TTTY10Q9BZA0 68 aa10.06□□□□□ -0.8
LIG3-213ENST00000590630 MOB1AQ9H8S9 216 aa10.06□□□□□ -0.8
LIG3-213ENST00000590630 GCM1Q9NP62 436 aa10.06□□□□□ -0.8
LIG3-213ENST00000590630 TMEM106BQ9NUM4 274 aa10.06□□□□□ -0.8
LIG3-213ENST00000590630 WIPI2Q9Y4P8 454 aa10.06□□□□□ -0.8
LIG3-213ENST00000590630 MXRA5Q9NR99 2828 aa10.05□□□□□ -0.8
LIG3-213ENST00000590630 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.05□□□□□ -0.8
LIG3-213ENST00000590630 SULT1C4O75897 302 aa10.05□□□□□ -0.8
LIG3-213ENST00000590630 APOL3O95236 402 aa10.05□□□□□ -0.8
LIG3-213ENST00000590630 KRT8P05787 483 aa10.05□□□□□ -0.8
LIG3-213ENST00000590630 CD200P41217 278 aa10.05□□□□□ -0.8
LIG3-213ENST00000590630 MZT1Q08AG7 82 aa10.05□□□□□ -0.8
LIG3-213ENST00000590630 ZNF181Q2M3W8 571 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms