RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 EPHA2P29317 976 aa9.45□□□□□ -0.9
SMAD4-211ENST00000590499 RBMXP38159 391 aaKnown RBP9.45□□□□□ -0.9
SMAD4-211ENST00000590499 OPRL1P41146 370 aa9.45□□□□□ -0.9
SMAD4-211ENST00000590499 SLC6A9P48067 706 aa9.45□□□□□ -0.9
SMAD4-211ENST00000590499 PRKXP51817 358 aa9.45□□□□□ -0.9
SMAD4-211ENST00000590499 ACTR3P61158 418 aa9.45□□□□□ -0.9
SMAD4-211ENST00000590499 GRB2P62993 217 aaKnown RBP9.45□□□□□ -0.9
SMAD4-211ENST00000590499 MVKQ03426 396 aa9.45□□□□□ -0.9
SMAD4-211ENST00000590499 EIF2B1Q14232 305 aaKnown RBP9.45□□□□□ -0.9
SMAD4-211ENST00000590499 PTGES3Q15185 160 aaKnown RBP9.45□□□□□ -0.9
SMAD4-211ENST00000590499 SLC35D3Q5M8T2 416 aa9.45□□□□□ -0.9
SMAD4-211ENST00000590499 RHOUQ7L0Q8 258 aa9.45□□□□□ -0.9
SMAD4-211ENST00000590499 AMIGO2Q86SJ2 522 aa9.45□□□□□ -0.9
SMAD4-211ENST00000590499 BHLHE23Q8NDY6 225 aa9.45□□□□□ -0.9
SMAD4-211ENST00000590499 OR10AD1Q8NGE0 317 aa9.45□□□□□ -0.9
SMAD4-211ENST00000590499 OR13G1Q8NGZ3 307 aa9.45□□□□□ -0.9
SMAD4-211ENST00000590499 OTOSQ8NHW6 89 aa9.45□□□□□ -0.9
SMAD4-211ENST00000590499 LRTOMTQ8WZ04 291 aa9.45□□□□□ -0.9
SMAD4-211ENST00000590499 SPSB4Q96A44 273 aa9.45□□□□□ -0.9
SMAD4-211ENST00000590499 OTULINQ96BN8 352 aa9.45□□□□□ -0.9
SMAD4-211ENST00000590499 ZNF582Q96NG8 517 aaPredicted RBP9.45□□□□□ -0.9
SMAD4-211ENST00000590499 OR2V2Q96R30 315 aa9.45□□□□□ -0.9
SMAD4-211ENST00000590499 SIGLEC11Q96RL6 698 aa9.45□□□□□ -0.9
SMAD4-211ENST00000590499 CENPMQ9NSP4 180 aa9.45□□□□□ -0.9
SMAD4-211ENST00000590499 TMEM106BQ9NUM4 274 aa9.45□□□□□ -0.9
SMAD4-211ENST00000590499 LPAR3Q9UBY5 353 aa9.45□□□□□ -0.9
SMAD4-211ENST00000590499 TMEFF2Q9UIK5 374 aaPredicted RBP9.45□□□□□ -0.9
SMAD4-211ENST00000590499 CCDC182A6NF36 153 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 ZAR1LA6NP61 321 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 CD300LBA8K4G0 201 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 B4DSR2 109 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 H0YL77 283 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 IGHV2-70P01814 119 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 IGHV2-5P01817 119 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 FAM157CP0CG43 387 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 SLC2A1P11166 492 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 TNFRSF1AP19438 455 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 DVL1P1P54792 670 aaPredicted RBP9.44□□□□□ -0.9
SMAD4-211ENST00000590499 EFNB1P98172 346 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 ZNF92Q03936 586 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 SLC3A1Q07837 685 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 MALLQ13021 153 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 SNAPC1Q16533 368 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 CR1LQ2VPA4 569 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 GLYATL3Q5SZD4 288 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 FAM120AOSQ5T036 256 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 SLX4IPQ5VYV7 408 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 CCDC121Q6ZUS5 278 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 PGAP1Q75T13 922 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 SPATC1Q76KD6 591 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 CXXC5Q7LFL8 322 aaKnown RBP9.44□□□□□ -0.9
SMAD4-211ENST00000590499 SHFQ7M4L6 423 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 OR2AE1Q8NHA4 323 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 RAB1CQ92928 201 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 TIMD4Q96H15 378 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 CENPNQ96H22 339 aaPredicted RBP9.44□□□□□ -0.9
SMAD4-211ENST00000590499 PLEKHA8Q96JA3 519 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 TEX12Q9BXU0 123 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 TOR3AQ9H497 397 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 ZNF665Q9H7R5 613 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 GCM1Q9NP62 436 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 KRT84Q9NSB2 600 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 TVP23BQ9NYZ1 205 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 KLHDC2Q9Y2U9 406 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 NPTNQ9Y639 398 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 DOCK11Q5JSL3 2073 aa9.44□□□□□ -0.9
SMAD4-211ENST00000590499 KRTAP9-7A8MTY7 169 aa9.43□□□□□ -0.9
SMAD4-211ENST00000590499 F5H5P2 479 aa9.43□□□□□ -0.9
SMAD4-211ENST00000590499 H3BNX3 289 aa9.43□□□□□ -0.9
SMAD4-211ENST00000590499 M0R129 80 aa9.43□□□□□ -0.9
SMAD4-211ENST00000590499 PRKYO43930 277 aa9.43□□□□□ -0.9
SMAD4-211ENST00000590499 FBXO24O75426 580 aa9.43□□□□□ -0.9
SMAD4-211ENST00000590499 HLA-DPB1P04440 258 aa9.43□□□□□ -0.9
SMAD4-211ENST00000590499 MSMBP08118 114 aa9.43□□□□□ -0.9
SMAD4-211ENST00000590499 NAA10P41227 235 aaPredicted RBP9.43□□□□□ -0.9
SMAD4-211ENST00000590499 SLC15A1P46059 708 aa9.43□□□□□ -0.9
SMAD4-211ENST00000590499 CX3CR1P49238 355 aa9.43□□□□□ -0.9
SMAD4-211ENST00000590499 RAD23AP54725 363 aa9.43□□□□□ -0.9
SMAD4-211ENST00000590499 KPNB1Q14974 876 aaKnown RBP9.43□□□□□ -0.9
SMAD4-211ENST00000590499 TAF13Q15543 124 aa9.43□□□□□ -0.9
SMAD4-211ENST00000590499 KLHL12Q53G59 568 aa9.43□□□□□ -0.9
SMAD4-211ENST00000590499 C12orf73Q69YU5 71 aa9.43□□□□□ -0.9
SMAD4-211ENST00000590499 MRPL21Q7Z2W9 205 aaKnown RBP9.43□□□□□ -0.9
SMAD4-211ENST00000590499 PYDC1Q8WXC3 89 aa9.43□□□□□ -0.9
SMAD4-211ENST00000590499 CIB1Q99828 191 aa9.43□□□□□ -0.9
SMAD4-211ENST00000590499 BEX2Q9BXY8 128 aa9.43□□□□□ -0.9
SMAD4-211ENST00000590499 SHARPINQ9H0F6 387 aa9.43□□□□□ -0.9
SMAD4-211ENST00000590499 SEMA6AQ9H2E6 1030 aa9.43□□□□□ -0.9
SMAD4-211ENST00000590499 TMEM100Q9NV29 134 aa9.43□□□□□ -0.9
SMAD4-211ENST00000590499 OAZ3Q9UMX2 235 aa9.43□□□□□ -0.9
SMAD4-211ENST00000590499 PPP1R3CQ9UQK1 317 aa9.43□□□□□ -0.9
SMAD4-211ENST00000590499 TMEM178BH3BS89 294 aa9.42□□□□□ -0.9
SMAD4-211ENST00000590499 IFNL4K9M1U5 179 aa9.42□□□□□ -0.9
SMAD4-211ENST00000590499 XRCC2O43543 280 aa9.42□□□□□ -0.9
SMAD4-211ENST00000590499 PTBP3O95758 552 aaKnown RBP9.42□□□□□ -0.9
SMAD4-211ENST00000590499 LYNP07948 512 aa9.42□□□□□ -0.9
SMAD4-211ENST00000590499 ALOX5APP20292 161 aa9.42□□□□□ -0.9
SMAD4-211ENST00000590499 PMELP40967 661 aa9.42□□□□□ -0.9
SMAD4-211ENST00000590499 CD200P41217 278 aa9.42□□□□□ -0.9
SMAD4-211ENST00000590499 SRP9P49458 86 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms