RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 EMC3Q9P0I2 261 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 TCFL5Q9UL49 500 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 FOXJ3Q9UPW0 622 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 XRCC3O43542 346 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 PCBD1P61457 104 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 ZNF684Q5T5D7 378 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.98□□□□□ -0.33
RETREG3-208ENST00000589797 GTPBP8Q8N3Z3 284 aaPredicted RBP12.98□□□□□ -0.33
RETREG3-208ENST00000589797 TMEM9BQ9NQ34 198 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 RPS4Y1P22090 263 aaKnown RBP12.98□□□□□ -0.33
RETREG3-208ENST00000589797 PPA1Q15181 289 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 HACD4Q5VWC8 232 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 NHLRC1Q6VVB1 395 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 NKAIN3Q8N8D7 197 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 OR51F2Q8NH61 342 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 NUBPLQ8TB37 319 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 UFSP2Q9NUQ7 469 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 PIEZO2Q9H5I5 2752 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 TMEM272A0A1B0GTI8 110 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 TPOP07202 933 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 NAGAP17050 411 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 EFNA3P52797 238 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 DSCR4P56555 118 aaPredicted RBP12.98□□□□□ -0.33
RETREG3-208ENST00000589797 BTG1P62324 171 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 TGFBR3Q03167 851 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 AKR1C1Q04828 323 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 ECH1Q13011 328 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 SLC10A1Q14973 349 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 CNN3Q15417 329 aaKnown RBP12.98□□□□□ -0.33
RETREG3-208ENST00000589797 ZNF362Q5T0B9 420 aaPredicted RBP12.98□□□□□ -0.33
RETREG3-208ENST00000589797 DOK3Q7L591 496 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 CDC20BQ86Y33 519 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 CCDC54Q8NEL0 328 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 OR10D3Q8NH80 312 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 FNDC9Q8TBE3 224 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 KISS1RQ969F8 398 aaPredicted RBP12.98□□□□□ -0.33
RETREG3-208ENST00000589797 PGLYRP3Q96LB9 341 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 MRPS18BQ9Y676 258 aaKnown RBP12.98□□□□□ -0.33
RETREG3-208ENST00000589797 TRAPPC2LH3BP13 241 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 KLRC4-KLRK1H3BQV0 150 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 PIN1P1O15428 100 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 SULT1B1O43704 296 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 GRB2P62993 217 aaKnown RBP12.98□□□□□ -0.33
RETREG3-208ENST00000589797 C19orf57Q0VDD7 668 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 SHBQ15464 509 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 CD276Q5ZPR3 534 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 RELL2Q8NC24 303 aaPredicted RBP12.98□□□□□ -0.33
RETREG3-208ENST00000589797 ABHD3Q8WU67 409 aa12.98□□□□□ -0.33
RETREG3-208ENST00000589797 WNK2Q9Y3S1 2297 aa12.97□□□□□ -0.33
RETREG3-208ENST00000589797 TMEM221A6NGB7 291 aa12.97□□□□□ -0.33
RETREG3-208ENST00000589797 CTAG2O75638 210 aa12.97□□□□□ -0.33
RETREG3-208ENST00000589797 MT-CO3P00414 261 aa12.97□□□□□ -0.33
RETREG3-208ENST00000589797 CPT2P23786 658 aa12.97□□□□□ -0.33
RETREG3-208ENST00000589797 OR1C1Q15619 314 aa12.97□□□□□ -0.33
RETREG3-208ENST00000589797 PRSS42Q7Z5A4 293 aa12.97□□□□□ -0.33
RETREG3-208ENST00000589797 SLC26A10Q8NG04 563 aa12.97□□□□□ -0.33
RETREG3-208ENST00000589797 CT55Q8WUE5 264 aa12.97□□□□□ -0.33
RETREG3-208ENST00000589797 FTCDNL1E5RQL4 147 aa12.97□□□□□ -0.33
RETREG3-208ENST00000589797 RAMP1O60894 148 aa12.97□□□□□ -0.33
RETREG3-208ENST00000589797 IGKV3-11P04433 115 aa12.97□□□□□ -0.33
RETREG3-208ENST00000589797 CD63P08962 238 aa12.97□□□□□ -0.33
RETREG3-208ENST00000589797 AGTR1P30556 359 aa12.97□□□□□ -0.33
RETREG3-208ENST00000589797 SLC25A26Q70HW3 274 aa12.97□□□□□ -0.33
RETREG3-208ENST00000589797 NAA40Q86UY6 237 aa12.97□□□□□ -0.33
RETREG3-208ENST00000589797 PAQR8Q8TEZ7 354 aa12.97□□□□□ -0.33
RETREG3-208ENST00000589797 HINT2Q9BX68 163 aa12.97□□□□□ -0.33
RETREG3-208ENST00000589797 NPAP1Q9NZP6 1156 aa12.97□□□□□ -0.33
RETREG3-208ENST00000589797 KLF4O43474 513 aa12.97□□□□□ -0.33
RETREG3-208ENST00000589797 GLSO94925 669 aaPredicted RBP12.97□□□□□ -0.33
RETREG3-208ENST00000589797 IGHEP01854 428 aa12.97□□□□□ -0.33
RETREG3-208ENST00000589797 ZNF806P0C7X5 589 aa12.97□□□□□ -0.33
RETREG3-208ENST00000589797 ZNF32P17041 273 aa12.97□□□□□ -0.33
RETREG3-208ENST00000589797 TMEM185AQ8NFB2 350 aa12.97□□□□□ -0.33
RETREG3-208ENST00000589797 ASB5Q8WWX0 329 aa12.97□□□□□ -0.33
RETREG3-208ENST00000589797 NINJ1Q92982 152 aa12.97□□□□□ -0.33
RETREG3-208ENST00000589797 SDHCQ99643 169 aaPredicted RBP12.97□□□□□ -0.33
RETREG3-208ENST00000589797 TMPRSS13Q9BYE2 586 aa12.97□□□□□ -0.33
RETREG3-208ENST00000589797 UCK1Q9HA47 277 aa12.97□□□□□ -0.33
RETREG3-208ENST00000589797 PRR13Q9NZ81 148 aa12.97□□□□□ -0.33
RETREG3-208ENST00000589797 SPG11Q96JI7 2443 aa12.97□□□□□ -0.33
RETREG3-208ENST00000589797 A0A1W2PP11 408 aa12.96□□□□□ -0.33
RETREG3-208ENST00000589797 ZNF814B7Z6K7 855 aa12.96□□□□□ -0.33
RETREG3-208ENST00000589797 ANKRD34CP0C6C1 535 aa12.96□□□□□ -0.33
RETREG3-208ENST00000589797 MGMTP16455 207 aa12.96□□□□□ -0.33
RETREG3-208ENST00000589797 PTBP1P26599 531 aaKnown RBP eCLIP12.96□□□□□ -0.33
RETREG3-208ENST00000589797 OR3A4PP47883 348 aa12.96□□□□□ -0.33
RETREG3-208ENST00000589797 DEFB109BQ30KR1 87 aa12.96□□□□□ -0.33
RETREG3-208ENST00000589797 SFRP5Q5T4F7 317 aa12.96□□□□□ -0.33
RETREG3-208ENST00000589797 HES3Q5TGS1 186 aa12.96□□□□□ -0.33
RETREG3-208ENST00000589797 NICN1Q9BSH3 213 aa12.96□□□□□ -0.33
RETREG3-208ENST00000589797 FAM86C1Q9NVL1 165 aa12.96□□□□□ -0.33
RETREG3-208ENST00000589797 SPAARA0A1B0GVQ0 90 aa12.96□□□□□ -0.33
RETREG3-208ENST00000589797 FBXW12Q6X9E4 464 aa12.96□□□□□ -0.33
RETREG3-208ENST00000589797 WDR89Q96FK6 387 aaPredicted RBP12.96□□□□□ -0.33
RETREG3-208ENST00000589797 REEP6Q96HR9 211 aa12.96□□□□□ -0.33
RETREG3-208ENST00000589797 FOXB1Q99853 325 aa12.96□□□□□ -0.33
RETREG3-208ENST00000589797 ADAM10O14672 748 aa12.96□□□□□ -0.34
RETREG3-208ENST00000589797 SLC6A1P30531 599 aa12.96□□□□□ -0.34
RETREG3-208ENST00000589797 RBP2P50120 134 aa12.96□□□□□ -0.34
RETREG3-208ENST00000589797 FGL1Q08830 312 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms