RNA–Protein interactions for RNA: ENST00000588980.5

U2AF1L4-211, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 2

Gene U2AF1L4, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-211	ENST00000588980	ARPC3	O15145	178 aa		10.79	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	SURF4	O15260	269 aa		10.79	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	DNPH1	O43598	174 aa		10.79	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	TRAF3IP2	O43734	574 aa	Predicted RBP	10.79	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	SERPINA3	P01011	423 aa		10.79	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	S100A9	P06702	114 aa	Known RBP	10.79	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	SPI1	P17947	270 aa		10.79	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	MPG	P29372	298 aa		10.79	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	GMFB	P60983	142 aa		10.79	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	MPPED2	Q15777	294 aa		10.79	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	ACKR1	Q16570	336 aa		10.79	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	C10orf91	Q5T1B1	145 aa		10.79	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	TMEM225	Q6GV28	225 aa		10.79	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	ARHGAP11A	Q6P4F7	1023 aa		10.79	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	FIP1L1	Q6UN15	594 aa	Known RBP	10.79	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	ZIC4	Q8N9L1	334 aa		10.79	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	OR4F15	Q8NGB8	312 aa		10.79	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	FNDC9	Q8TBE3	224 aa		10.79	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	ZFP3	Q96NJ6	502 aa		10.79	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	OXGR1	Q96P68	337 aa		10.79	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	OR10A4	Q9H209	315 aa		10.79	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	NKIRAS2	Q9NYR9	191 aa		10.79	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	OPN4	Q9UHM6	478 aa		10.79	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	GPR52	Q9Y2T5	361 aa		10.79	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	TRAV1-2	A0A0B4J238	106 aa		10.78	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	LOC102725191	A0A1B0GVB3	256 aa		10.78	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	ZNF716	A6NP11	495 aa		10.78	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	DVL2	O14641	736 aa		10.78	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	ARPC5	O15511	151 aa		10.78	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	SGCE	O43556	437 aa		10.78	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	SIX6	O95475	246 aa		10.78	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	TXNDC12	O95881	172 aa		10.78	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	HEXA	P06865	529 aa		10.78	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	SFTPC	P11686	197 aa		10.78	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	HIST1H1C	P16403	213 aa	Known RBP	10.78	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	BTF3	P20290	206 aa	Known RBP	10.78	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	NTF4	P34130	210 aa		10.78	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	POU3F1	Q03052	451 aa	Predicted RBP	10.78	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	SLC17A1	Q14916	467 aa		10.78	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	PON3	Q15166	354 aa		10.78	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	KRTCAP3	Q53RY4	240 aa		10.78	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	AVPI1	Q5T686	147 aa		10.78	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	SFRP4	Q6FHJ7	346 aa	Predicted RBP	10.78	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	ADGRE4P	Q86SQ3	457 aa		10.78	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	LDLRAD3	Q86YD5	345 aa		10.78	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	SLC43A2	Q8N370	569 aa		10.78	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	OR10K1	Q8NGX5	313 aa		10.78	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	OR4K13	Q8NH42	304 aa		10.78	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	ZPLD1	Q8TCW7	415 aa		10.78	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	CPNE4	Q96A23	557 aa	Predicted RBP	10.78	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	ZNF775	Q96BV0	537 aa	Predicted RBP	10.78	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	SARAF	Q96BY9	339 aa		10.78	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	NAA11	Q9BSU3	229 aa	Predicted RBP	10.78	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	NOX3	Q9HBY0	568 aa		10.78	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	MED29	Q9NX70	200 aa		10.78	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	TAS2R3	Q9NYW6	316 aa		10.78	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	ARPC1B	O15143	372 aa	Known RBP	10.77	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	FOLR2	P14207	255 aa		10.77	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	MGMT	P16455	207 aa		10.77	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	CDKN2A	P42771	156 aa	Known RBP	10.77	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	OR10A3	P58181	314 aa		10.77	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	MELK	Q14680	651 aa		10.77	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	GUCA2B	Q16661	112 aa		10.77	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	MEST	Q5EB52	335 aa		10.77	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	ABLIM2	Q6H8Q1	611 aa		10.77	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	SLC35D2	Q76EJ3	337 aa		10.77	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	FCRLA	Q7L513	359 aa		10.77	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	ZNF519	Q8TB69	540 aa		10.77	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	ABHD3	Q8WU67	409 aa		10.77	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	SGK3	Q96BR1	496 aa		10.77	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	ZNF385A	Q96PM9	386 aa	Known RBP	10.77	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	HCAR1	Q9BXC0	346 aa		10.77	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	TXNIP	Q9H3M7	391 aa		10.77	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	CMC2	Q9NRP2	79 aa		10.77	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	SIRT4	Q9Y6E7	314 aa	Predicted RBP	10.77	□□□□□ -0.68
U2AF1L4-211	ENST00000588980	ZGRF1	Q86YA3	2104 aa		10.77	□□□□□ -0.69
U2AF1L4-211	ENST00000588980	TMEM218	A2RU14	115 aa		10.77	□□□□□ -0.69
U2AF1L4-211	ENST00000588980	OR14I1	A6ND48	311 aa		10.77	□□□□□ -0.69
U2AF1L4-211	ENST00000588980	DISC1	C4P0D8	188 aa		10.77	□□□□□ -0.69
U2AF1L4-211	ENST00000588980	PLPP2	O43688	288 aa		10.77	□□□□□ -0.69
U2AF1L4-211	ENST00000588980	CYTIP	O60759	359 aa		10.77	□□□□□ -0.69
U2AF1L4-211	ENST00000588980	IGHM	P01871	453 aa		10.77	□□□□□ -0.69
U2AF1L4-211	ENST00000588980	APEH	P13798	732 aa	Known RBP	10.77	□□□□□ -0.69
U2AF1L4-211	ENST00000588980	SDHA	P31040	664 aa		10.77	□□□□□ -0.69
U2AF1L4-211	ENST00000588980	CAPZA2	P47755	286 aa		10.77	□□□□□ -0.69
U2AF1L4-211	ENST00000588980	RPL27	P61353	136 aa	Known RBP	10.77	□□□□□ -0.69
U2AF1L4-211	ENST00000588980	SLC25A35	Q3KQZ1	300 aa		10.77	□□□□□ -0.69
U2AF1L4-211	ENST00000588980	SPAG16	Q8N0X2	631 aa		10.77	□□□□□ -0.69
U2AF1L4-211	ENST00000588980	PUSL1	Q8N0Z8	303 aa	Known RBP	10.77	□□□□□ -0.69
U2AF1L4-211	ENST00000588980	CYB561A3	Q8NBI2	242 aa		10.77	□□□□□ -0.69
U2AF1L4-211	ENST00000588980	NPEPL1	Q8NDH3	523 aa		10.77	□□□□□ -0.69
U2AF1L4-211	ENST00000588980	OR9K2	Q8NGE7	335 aa		10.77	□□□□□ -0.69
U2AF1L4-211	ENST00000588980	OR52E2	Q8NGJ4	325 aa		10.77	□□□□□ -0.69
U2AF1L4-211	ENST00000588980	ABHD4	Q8TB40	342 aa		10.77	□□□□□ -0.69
U2AF1L4-211	ENST00000588980	SMAP2	Q8WU79	429 aa	Predicted RBP	10.77	□□□□□ -0.69
U2AF1L4-211	ENST00000588980	MRPL48	Q96GC5	212 aa	Known RBP	10.77	□□□□□ -0.69
U2AF1L4-211	ENST00000588980	NMNAT3	Q96T66	252 aa		10.77	□□□□□ -0.69
U2AF1L4-211	ENST00000588980	TSNAX	Q99598	290 aa	Known RBP	10.77	□□□□□ -0.69
U2AF1L4-211	ENST00000588980	EMC6	Q9BV81	110 aa		10.77	□□□□□ -0.69
U2AF1L4-211	ENST00000588980	TEX12	Q9BXU0	123 aa		10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms