RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 DUX4L9Q6RFH8 374 aaPredicted RBP15.18■□□□□ 0.02
CCDC43-204ENST00000588687 Q6ZSV7 163 aa15.18■□□□□ 0.02
CCDC43-204ENST00000588687 BTN2A1Q7KYR7 527 aa15.18■□□□□ 0.02
CCDC43-204ENST00000588687 WDR86Q86TI4 376 aa15.18■□□□□ 0.02
CCDC43-204ENST00000588687 ZSCAN4Q8NAM6 433 aaPredicted RBP15.18■□□□□ 0.02
CCDC43-204ENST00000588687 SDR9C7Q8NEX9 313 aa15.18■□□□□ 0.02
CCDC43-204ENST00000588687 OR52J3Q8NH60 311 aa15.18■□□□□ 0.02
CCDC43-204ENST00000588687 TBC1D15Q8TC07 691 aa15.18■□□□□ 0.02
CCDC43-204ENST00000588687 MRPL15Q9P015 296 aaKnown RBP15.18■□□□□ 0.02
CCDC43-204ENST00000588687 DUX4Q9UBX2 424 aa15.18■□□□□ 0.02
CCDC43-204ENST00000588687 NOP16Q9Y3C1 178 aaKnown RBP15.18■□□□□ 0.02
CCDC43-204ENST00000588687 TRAV38-1A0A0B4J264 116 aa15.17■□□□□ 0.02
CCDC43-204ENST00000588687 DVL1O14640 695 aa15.17■□□□□ 0.02
CCDC43-204ENST00000588687 NDUFA2O43678 99 aa15.17■□□□□ 0.02
CCDC43-204ENST00000588687 RENP00797 406 aa15.17■□□□□ 0.02
CCDC43-204ENST00000588687 H2AFXP16104 143 aaPredicted RBP15.17■□□□□ 0.02
CCDC43-204ENST00000588687 SLC6A6P31641 620 aa15.17■□□□□ 0.02
CCDC43-204ENST00000588687 RPS27P42677 84 aaKnown RBP15.17■□□□□ 0.02
CCDC43-204ENST00000588687 TPTEP56180 551 aa15.17■□□□□ 0.02
CCDC43-204ENST00000588687 ARF6P62330 175 aa15.17■□□□□ 0.02
CCDC43-204ENST00000588687 ELF3P78545 371 aaPredicted RBP15.17■□□□□ 0.02
CCDC43-204ENST00000588687 C11orf91Q3C1V1 193 aa15.17■□□□□ 0.02
CCDC43-204ENST00000588687 HACD2Q6Y1H2 254 aa15.17■□□□□ 0.02
CCDC43-204ENST00000588687 BOLLQ8N9W6 283 aaKnown RBP15.17■□□□□ 0.02
CCDC43-204ENST00000588687 ZNRF4Q8WWF5 429 aa15.17■□□□□ 0.02
CCDC43-204ENST00000588687 DDOQ99489 341 aa15.17■□□□□ 0.02
CCDC43-204ENST00000588687 KCTD14Q9BQ13 255 aaPredicted RBP15.17■□□□□ 0.02
CCDC43-204ENST00000588687 C16orf95Q9H693 158 aa15.17■□□□□ 0.02
CCDC43-204ENST00000588687 TRIM36Q9NQ86 728 aa15.17■□□□□ 0.02
CCDC43-204ENST00000588687 DCAF13Q9NV06 445 aaKnown RBP15.17■□□□□ 0.02
CCDC43-204ENST00000588687 C1orf123Q9NWV4 160 aa15.17■□□□□ 0.02
CCDC43-204ENST00000588687 KCNG2Q9UJ96 466 aa15.17■□□□□ 0.02
CCDC43-204ENST00000588687 RPUSD1Q9UJJ7 312 aaKnown RBP15.17■□□□□ 0.02
CCDC43-204ENST00000588687 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.16■□□□□ 0.02
CCDC43-204ENST00000588687 LYPD4Q6UWN0 246 aa15.16■□□□□ 0.02
CCDC43-204ENST00000588687 C11orf53Q8IXP5 236 aa15.16■□□□□ 0.02
CCDC43-204ENST00000588687 LY6G5BQ8NDX9 201 aa15.16■□□□□ 0.02
CCDC43-204ENST00000588687 OR56B2PQ8NGI1 322 aa15.16■□□□□ 0.02
CCDC43-204ENST00000588687 OR2AJ1Q8NGZ0 328 aa15.16■□□□□ 0.02
CCDC43-204ENST00000588687 SEMA6AQ9H2E6 1030 aa15.16■□□□□ 0.02
CCDC43-204ENST00000588687 KRCC1Q9NPI7 259 aaPredicted RBP15.16■□□□□ 0.02
CCDC43-204ENST00000588687 ADA2Q9NZK5 511 aa15.16■□□□□ 0.02
CCDC43-204ENST00000588687 ZNRD1Q9P1U0 126 aa15.16■□□□□ 0.02
CCDC43-204ENST00000588687 FAM32AQ9Y421 112 aaKnown RBP15.16■□□□□ 0.02
CCDC43-204ENST00000588687 KPTNQ9Y664 436 aa15.16■□□□□ 0.02
CCDC43-204ENST00000588687 KMT2CQ8NEZ4 4911 aaKnown RBP15.15■□□□□ 0.02
CCDC43-204ENST00000588687 GSSP48637 474 aa15.15■□□□□ 0.02
CCDC43-204ENST00000588687 PCK2Q16822 640 aa15.15■□□□□ 0.02
CCDC43-204ENST00000588687 CDONQ4KMG0 1287 aa15.15■□□□□ 0.02
CCDC43-204ENST00000588687 METAP1DQ6UB28 335 aaPredicted RBP15.15■□□□□ 0.02
CCDC43-204ENST00000588687 VMO1Q7Z5L0 202 aa15.15■□□□□ 0.02
CCDC43-204ENST00000588687 C1QL4Q86Z23 238 aa15.15■□□□□ 0.02
CCDC43-204ENST00000588687 PDZD9Q8IXQ8 264 aa15.15■□□□□ 0.02
CCDC43-204ENST00000588687 UBE2FQ969M7 185 aa15.15■□□□□ 0.02
CCDC43-204ENST00000588687 IFT27Q9BW83 186 aa15.15■□□□□ 0.02
CCDC43-204ENST00000588687 IGHV3OR15-7A0A075B7D8 119 aa15.14■□□□□ 0.01
CCDC43-204ENST00000588687 IDH3BO43837 385 aa15.14■□□□□ 0.01
CCDC43-204ENST00000588687 ECDO95905 644 aaPredicted RBP15.14■□□□□ 0.01
CCDC43-204ENST00000588687 PYCR1P32322 319 aa15.14■□□□□ 0.01
CCDC43-204ENST00000588687 NUDT2P50583 147 aa15.14■□□□□ 0.01
CCDC43-204ENST00000588687 POU4F2Q12837 409 aa15.14■□□□□ 0.01
CCDC43-204ENST00000588687 DRAM2Q6UX65 266 aa15.14■□□□□ 0.01
CCDC43-204ENST00000588687 GDPGP1Q6ZNW5 385 aa15.14■□□□□ 0.01
CCDC43-204ENST00000588687 SPTSSAQ969W0 71 aa15.14■□□□□ 0.01
CCDC43-204ENST00000588687 SPSB4Q96A44 273 aa15.14■□□□□ 0.01
CCDC43-204ENST00000588687 CCDC134Q9H6E4 229 aa15.14■□□□□ 0.01
CCDC43-204ENST00000588687 TCF7L1Q9HCS4 588 aa15.14■□□□□ 0.01
CCDC43-204ENST00000588687 SAMD4AQ9UPU9 718 aaKnown RBP15.14■□□□□ 0.01
CCDC43-204ENST00000588687 COMMD3-BMI1R4GMX3 469 aa15.14■□□□□ 0.01
CCDC43-204ENST00000588687 A0A1B0GVI7 797 aa15.13■□□□□ 0.01
CCDC43-204ENST00000588687 GGT3PA6NGU5 568 aa15.13■□□□□ 0.01
CCDC43-204ENST00000588687 BHLHE40O14503 412 aa15.13■□□□□ 0.01
CCDC43-204ENST00000588687 TSPAN9O75954 239 aa15.13■□□□□ 0.01
CCDC43-204ENST00000588687 HLA-DQA2P01906 255 aa15.13■□□□□ 0.01
CCDC43-204ENST00000588687 GRPP07492 148 aa15.13■□□□□ 0.01
CCDC43-204ENST00000588687 AMY2BP19961 511 aa15.13■□□□□ 0.01
CCDC43-204ENST00000588687 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.13■□□□□ 0.01
CCDC43-204ENST00000588687 WDR38Q5JTN6 314 aa15.13■□□□□ 0.01
CCDC43-204ENST00000588687 GLYATQ6IB77 296 aa15.13■□□□□ 0.01
CCDC43-204ENST00000588687 SPERTQ8NA61 448 aa15.13■□□□□ 0.01
CCDC43-204ENST00000588687 SCCPDHQ8NBX0 429 aa15.13■□□□□ 0.01
CCDC43-204ENST00000588687 ST8SIA4Q92187 359 aa15.13■□□□□ 0.01
CCDC43-204ENST00000588687 CNTD2Q9H8S5 307 aa15.13■□□□□ 0.01
CCDC43-204ENST00000588687 EFCAB1Q9HAE3 211 aa15.13■□□□□ 0.01
CCDC43-204ENST00000588687 VPREB3Q9UKI3 123 aa15.13■□□□□ 0.01
CCDC43-204ENST00000588687 TET2Q6N021 2002 aaPredicted RBP15.12■□□□□ 0.01
CCDC43-204ENST00000588687 TVP23AA6NH52 213 aa15.12■□□□□ 0.01
CCDC43-204ENST00000588687 A6NLC8 198 aa15.12■□□□□ 0.01
CCDC43-204ENST00000588687 RNASEK-C17orf49H0YIS7 233 aa15.12■□□□□ 0.01
CCDC43-204ENST00000588687 NDUFAB1O14561 156 aa15.12■□□□□ 0.01
CCDC43-204ENST00000588687 GADD45GO95257 159 aa15.12■□□□□ 0.01
CCDC43-204ENST00000588687 SLC2A1P11166 492 aa15.12■□□□□ 0.01
CCDC43-204ENST00000588687 NOS3P29474 1203 aa15.12■□□□□ 0.01
CCDC43-204ENST00000588687 DLX1P56177 255 aa15.12■□□□□ 0.01
CCDC43-204ENST00000588687 CSNK2BP67870 215 aa15.12■□□□□ 0.01
CCDC43-204ENST00000588687 SPIBQ01892 262 aa15.12■□□□□ 0.01
CCDC43-204ENST00000588687 PRB3Q04118 309 aaPredicted RBP15.12■□□□□ 0.01
CCDC43-204ENST00000588687 SLC35F1Q5T1Q4 408 aa15.12■□□□□ 0.01
CCDC43-204ENST00000588687 DCXRQ7Z4W1 244 aa15.12■□□□□ 0.01
CCDC43-204ENST00000588687 ZDHHC21Q8IVQ6 265 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms