RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 CYB561A3Q8NBI2 242 aa13.92□□□□□ -0.18
LINC01842-201ENST00000588275 TBC1D15Q8TC07 691 aa13.92□□□□□ -0.18
LINC01842-201ENST00000588275 ST8SIA4Q92187 359 aa13.92□□□□□ -0.18
LINC01842-201ENST00000588275 MCUR1Q96AQ8 359 aa13.92□□□□□ -0.18
LINC01842-201ENST00000588275 COPS4Q9BT78 406 aa13.92□□□□□ -0.18
LINC01842-201ENST00000588275 TRIM15Q9C019 465 aa13.92□□□□□ -0.18
LINC01842-201ENST00000588275 TRIM36Q9NQ86 728 aa13.92□□□□□ -0.18
LINC01842-201ENST00000588275 POMT1Q9Y6A1 747 aa13.92□□□□□ -0.18
LINC01842-201ENST00000588275 IGHV1-69DA0A0B4J2H0 117 aa13.91□□□□□ -0.18
LINC01842-201ENST00000588275 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.91□□□□□ -0.18
LINC01842-201ENST00000588275 C5orf63A6NC05 138 aa13.91□□□□□ -0.18
LINC01842-201ENST00000588275 IGHV1-69P01742 117 aa13.91□□□□□ -0.18
LINC01842-201ENST00000588275 IGHV4-59P01825 116 aa13.91□□□□□ -0.18
LINC01842-201ENST00000588275 SLC2A1P11166 492 aa13.91□□□□□ -0.18
LINC01842-201ENST00000588275 RRM2P31350 389 aa13.91□□□□□ -0.18
LINC01842-201ENST00000588275 IFNGR2P38484 337 aa13.91□□□□□ -0.18
LINC01842-201ENST00000588275 PRKXP51817 358 aa13.91□□□□□ -0.18
LINC01842-201ENST00000588275 PDCD1Q15116 288 aa13.91□□□□□ -0.18
LINC01842-201ENST00000588275 TAF13Q15543 124 aa13.91□□□□□ -0.18
LINC01842-201ENST00000588275 LYPD4Q6UWN0 246 aa13.91□□□□□ -0.18
LINC01842-201ENST00000588275 BTN2A1Q7KYR7 527 aa13.91□□□□□ -0.18
LINC01842-201ENST00000588275 OR52L1Q8NGH7 329 aa13.91□□□□□ -0.18
LINC01842-201ENST00000588275 OR56B2PQ8NGI1 322 aa13.91□□□□□ -0.18
LINC01842-201ENST00000588275 OR51L1Q8NGJ5 315 aa13.91□□□□□ -0.18
LINC01842-201ENST00000588275 UBE2FQ969M7 185 aa13.91□□□□□ -0.18
LINC01842-201ENST00000588275 PYURFQ96I23 114 aa13.91□□□□□ -0.18
LINC01842-201ENST00000588275 CITED1Q99966 193 aa13.91□□□□□ -0.18
LINC01842-201ENST00000588275 EGLN3Q9H6Z9 239 aa13.91□□□□□ -0.18
LINC01842-201ENST00000588275 MRPL15Q9P015 296 aaKnown RBP13.91□□□□□ -0.18
LINC01842-201ENST00000588275 KCNG2Q9UJ96 466 aa13.91□□□□□ -0.18
LINC01842-201ENST00000588275 RNF114Q9Y508 228 aa13.91□□□□□ -0.18
LINC01842-201ENST00000588275 WNK1Q9H4A3 2382 aa13.91□□□□□ -0.18
LINC01842-201ENST00000588275 A0A0U1RQK1 487 aa13.9□□□□□ -0.18
LINC01842-201ENST00000588275 BHLHE40O14503 412 aa13.9□□□□□ -0.18
LINC01842-201ENST00000588275 DVL1O14640 695 aa13.9□□□□□ -0.18
LINC01842-201ENST00000588275 TIMM23O14925 209 aa13.9□□□□□ -0.18
LINC01842-201ENST00000588275 NDUFA2O43678 99 aa13.9□□□□□ -0.18
LINC01842-201ENST00000588275 IDH3BO43837 385 aa13.9□□□□□ -0.18
LINC01842-201ENST00000588275 GPR137BO60478 399 aa13.9□□□□□ -0.18
LINC01842-201ENST00000588275 SPARCP09486 303 aa13.9□□□□□ -0.18
LINC01842-201ENST00000588275 DCXRQ7Z4W1 244 aa13.9□□□□□ -0.18
LINC01842-201ENST00000588275 FAM90A1Q86YD7 464 aa13.9□□□□□ -0.18
LINC01842-201ENST00000588275 GCSAMQ8N6F7 178 aa13.9□□□□□ -0.18
LINC01842-201ENST00000588275 OR4C15Q8NGM1 316 aa13.9□□□□□ -0.18
LINC01842-201ENST00000588275 GNPDA2Q8TDQ7 276 aa13.9□□□□□ -0.18
LINC01842-201ENST00000588275 DYRK2Q92630 601 aa13.9□□□□□ -0.18
LINC01842-201ENST00000588275 CMTM5Q96DZ9 223 aa13.9□□□□□ -0.18
LINC01842-201ENST00000588275 SIRPDQ9H106 197 aa13.9□□□□□ -0.18
LINC01842-201ENST00000588275 MMP27Q9H306 513 aa13.9□□□□□ -0.18
LINC01842-201ENST00000588275 CCDC134Q9H6E4 229 aa13.9□□□□□ -0.18
LINC01842-201ENST00000588275 CENPMQ9NSP4 180 aa13.9□□□□□ -0.18
LINC01842-201ENST00000588275 PRKDCP78527 4128 aaKnown RBP13.9□□□□□ -0.18
LINC01842-201ENST00000588275 NOTCH1P46531 2555 aa13.89□□□□□ -0.19
LINC01842-201ENST00000588275 TBX1O43435 398 aa13.89□□□□□ -0.19
LINC01842-201ENST00000588275 PTBP3O95758 552 aaKnown RBP13.89□□□□□ -0.19
LINC01842-201ENST00000588275 SEMG1P04279 462 aa13.89□□□□□ -0.19
LINC01842-201ENST00000588275 FABP3P05413 133 aa13.89□□□□□ -0.19
LINC01842-201ENST00000588275 PSKH1P11801 424 aa13.89□□□□□ -0.19
LINC01842-201ENST00000588275 GSSP48637 474 aa13.89□□□□□ -0.19
LINC01842-201ENST00000588275 KRTAP10-3P60369 221 aa13.89□□□□□ -0.19
LINC01842-201ENST00000588275 MZT1Q08AG7 82 aa13.89□□□□□ -0.19
LINC01842-201ENST00000588275 DRAM2Q6UX65 266 aa13.89□□□□□ -0.19
LINC01842-201ENST00000588275 FGFRL1Q8N441 504 aa13.89□□□□□ -0.19
LINC01842-201ENST00000588275 SPERTQ8NA61 448 aa13.89□□□□□ -0.19
LINC01842-201ENST00000588275 PLPP7Q8NBV4 271 aa13.89□□□□□ -0.19
LINC01842-201ENST00000588275 OR9Q1Q8NGQ5 310 aa13.89□□□□□ -0.19
LINC01842-201ENST00000588275 OR2T4Q8NH00 348 aa13.89□□□□□ -0.19
LINC01842-201ENST00000588275 OR8S1Q8NH09 359 aa13.89□□□□□ -0.19
LINC01842-201ENST00000588275 ZNRF4Q8WWF5 429 aa13.89□□□□□ -0.19
LINC01842-201ENST00000588275 C14orf119Q9NWQ9 140 aa13.89□□□□□ -0.19
LINC01842-201ENST00000588275 ONECUT1Q9UBC0 465 aa13.89□□□□□ -0.19
LINC01842-201ENST00000588275 ANKRD30BLA7E2S9 258 aa13.88□□□□□ -0.19
LINC01842-201ENST00000588275 MSX2P35548 267 aaPredicted RBP13.88□□□□□ -0.19
LINC01842-201ENST00000588275 TSPAN31Q12999 210 aa13.88□□□□□ -0.19
LINC01842-201ENST00000588275 PGBD2Q6P3X8 592 aa13.88□□□□□ -0.19
LINC01842-201ENST00000588275 RHOUQ7L0Q8 258 aa13.88□□□□□ -0.19
LINC01842-201ENST00000588275 VMO1Q7Z5L0 202 aa13.88□□□□□ -0.19
LINC01842-201ENST00000588275 ZDHHC21Q8IVQ6 265 aa13.88□□□□□ -0.19
LINC01842-201ENST00000588275 LINC01006Q8NI28 216 aa13.88□□□□□ -0.19
LINC01842-201ENST00000588275 LRRC29Q8WV35 223 aa13.88□□□□□ -0.19
LINC01842-201ENST00000588275 SLAMF6Q96DU3 332 aa13.88□□□□□ -0.19
LINC01842-201ENST00000588275 NSMCE2Q96MF7 247 aa13.88□□□□□ -0.19
LINC01842-201ENST00000588275 RBM4BQ9BQ04 359 aaKnown RBP13.88□□□□□ -0.19
LINC01842-201ENST00000588275 GORASP2Q9H8Y8 452 aa13.88□□□□□ -0.19
LINC01842-201ENST00000588275 DNAJB11Q9UBS4 358 aa13.88□□□□□ -0.19
LINC01842-201ENST00000588275 MAGEL2Q9UJ55 1249 aa13.88□□□□□ -0.19
LINC01842-201ENST00000588275 FAM96BQ9Y3D0 163 aa13.88□□□□□ -0.19
LINC01842-201ENST00000588275 CDH10Q9Y6N8 788 aa13.88□□□□□ -0.19
LINC01842-201ENST00000588275 COMMD3-BMI1R4GMX3 469 aa13.88□□□□□ -0.19
LINC01842-201ENST00000588275 A0A1B0GW55 424 aa13.87□□□□□ -0.19
LINC01842-201ENST00000588275 FCN3O75636 299 aa13.87□□□□□ -0.19
LINC01842-201ENST00000588275 ECDO95905 644 aaPredicted RBP13.87□□□□□ -0.19
LINC01842-201ENST00000588275 DUX4L2P0CJ85 424 aa13.87□□□□□ -0.19
LINC01842-201ENST00000588275 DUX4L3P0CJ86 424 aa13.87□□□□□ -0.19
LINC01842-201ENST00000588275 DUX4L4P0CJ87 422 aa13.87□□□□□ -0.19
LINC01842-201ENST00000588275 DUX4L5P0CJ88 424 aa13.87□□□□□ -0.19
LINC01842-201ENST00000588275 DUX4L6P0CJ89 424 aa13.87□□□□□ -0.19
LINC01842-201ENST00000588275 DUX4L7P0CJ90 424 aa13.87□□□□□ -0.19
LINC01842-201ENST00000588275 OTX1P32242 354 aaPredicted RBP13.87□□□□□ -0.19
LINC01842-201ENST00000588275 RPL15P61313 204 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms