RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 GPR84Q9NQS5 396 aa11.68□□□□□ -0.54
VMP1-203ENST00000586245 CBLN4Q9NTU7 201 aa11.68□□□□□ -0.54
VMP1-203ENST00000586245 FRRS1LQ9P0K9 344 aa11.68□□□□□ -0.54
VMP1-203ENST00000586245 TAAR3PQ9P1P4 343 aa11.68□□□□□ -0.54
VMP1-203ENST00000586245 PURGQ9UJV8 347 aaKnown RBP11.68□□□□□ -0.54
VMP1-203ENST00000586245 FBXO9Q9UK97 447 aaPredicted RBP11.68□□□□□ -0.54
VMP1-203ENST00000586245 EDARQ9UNE0 448 aa11.68□□□□□ -0.54
VMP1-203ENST00000586245 ABCA4P78363 2273 aa11.68□□□□□ -0.54
VMP1-203ENST00000586245 A0A1B0GVI7 797 aa11.67□□□□□ -0.54
VMP1-203ENST00000586245 TMEM212A6NML5 194 aa11.67□□□□□ -0.54
VMP1-203ENST00000586245 P2RY10O00398 339 aa11.67□□□□□ -0.54
VMP1-203ENST00000586245 MTRF1O75570 445 aaKnown RBP11.67□□□□□ -0.54
VMP1-203ENST00000586245 RPSAP08865 295 aaKnown RBP11.67□□□□□ -0.54
VMP1-203ENST00000586245 DANCRP0C864 163 aa11.67□□□□□ -0.54
VMP1-203ENST00000586245 KITLGP21583 273 aa11.67□□□□□ -0.54
VMP1-203ENST00000586245 DDOSTP39656 456 aa11.67□□□□□ -0.54
VMP1-203ENST00000586245 MAP2K4P45985 399 aa11.67□□□□□ -0.54
VMP1-203ENST00000586245 GSK3AP49840 483 aa11.67□□□□□ -0.54
VMP1-203ENST00000586245 GTF2A1P52655 376 aaPredicted RBP11.67□□□□□ -0.54
VMP1-203ENST00000586245 FAM3AP98173 230 aa11.67□□□□□ -0.54
VMP1-203ENST00000586245 BDH1Q02338 343 aa11.67□□□□□ -0.54
VMP1-203ENST00000586245 CDK5R1Q15078 307 aa11.67□□□□□ -0.54
VMP1-203ENST00000586245 OR2T2Q6IF00 324 aa11.67□□□□□ -0.54
VMP1-203ENST00000586245 DOK3Q7L591 496 aa11.67□□□□□ -0.54
VMP1-203ENST00000586245 DTX2Q86UW9 622 aa11.67□□□□□ -0.54
VMP1-203ENST00000586245 SPARTQ8N0X7 666 aa11.67□□□□□ -0.54
VMP1-203ENST00000586245 OR5AK2Q8NH90 309 aa11.67□□□□□ -0.54
VMP1-203ENST00000586245 RNF166Q96A37 237 aaPredicted RBP11.67□□□□□ -0.54
VMP1-203ENST00000586245 FAM71F1Q96KD3 344 aaPredicted RBP11.67□□□□□ -0.54
VMP1-203ENST00000586245 LYZL4Q96KX0 146 aa11.67□□□□□ -0.54
VMP1-203ENST00000586245 OR5M11Q96RB7 305 aa11.67□□□□□ -0.54
VMP1-203ENST00000586245 ZNF696Q9H7X3 374 aa11.67□□□□□ -0.54
VMP1-203ENST00000586245 DYNLRB1Q9NP97 96 aa11.67□□□□□ -0.54
VMP1-203ENST00000586245 ACOT13Q9NPJ3 140 aa11.67□□□□□ -0.54
VMP1-203ENST00000586245 MYEF2Q9P2K5 600 aaKnown RBP11.67□□□□□ -0.54
VMP1-203ENST00000586245 ST6GALNAC2Q9UJ37 374 aa11.67□□□□□ -0.54
VMP1-203ENST00000586245 LAMP3Q9UQV4 416 aa11.67□□□□□ -0.54
VMP1-203ENST00000586245 LSM2Q9Y333 95 aaKnown RBP11.67□□□□□ -0.54
VMP1-203ENST00000586245 NBPF19A0A087WUL8 3843 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 A0A087WXM4 84 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 hCG_38984A0A1B0GV85 526 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 PLSCR5A0PG75 271 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 TRIM64A6NGJ6 449 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 OR4C45A6NMZ5 311 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 IQCF6A8MYZ5 107 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 OGG1O15527 345 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 SYT7O43581 403 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 LALBAP00709 142 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 IGLV3-1P01715 115 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 SOD3P08294 240 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 HSMCR30P0CW71 290 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 ATP6V1B1P15313 513 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 ZNF12P17014 697 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 LIPAP38571 399 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 MAP2K3P46734 347 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 PRSS12P56730 875 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 EMX1Q04741 257 aaPredicted RBP11.66□□□□□ -0.54
VMP1-203ENST00000586245 SLC3A1Q07837 685 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 ACSM1Q08AH1 577 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 SWI5Q1ZZU3 235 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 MST1LQ2TV78 715 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 ZMAT1Q5H9K5 638 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 XAF1Q6GPH4 301 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 ZNF367Q7RTV3 350 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 OR5AS1Q8N127 324 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 ZFP41Q8N8Y5 198 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 BHLHE23Q8NDY6 225 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 CCDC54Q8NEL0 328 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 TSPAN14Q8NG11 270 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 FCGR1BQ92637 280 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 ITFG2Q969R8 447 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 SMIM19Q96E16 107 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 CCL19Q99731 98 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 TRAF4Q9BUZ4 470 aaPredicted RBP11.66□□□□□ -0.54
VMP1-203ENST00000586245 ISYNA1Q9NPH2 558 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 CYSLTR2Q9NS75 346 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 CGGBP1Q9UFW8 167 aaPredicted RBP11.66□□□□□ -0.54
VMP1-203ENST00000586245 PMF1-BGLAPU3KQ54 211 aa11.66□□□□□ -0.54
VMP1-203ENST00000586245 PNMA8CA0A1B0GUJ8 204 aa11.65□□□□□ -0.54
VMP1-203ENST00000586245 LOC107986453A0A1B0GWG9 222 aa11.65□□□□□ -0.54
VMP1-203ENST00000586245 LOC390937A0A1W2PQ73 354 aa11.65□□□□□ -0.54
VMP1-203ENST00000586245 CD300LBA8K4G0 201 aa11.65□□□□□ -0.54
VMP1-203ENST00000586245 M0R233 179 aa11.65□□□□□ -0.54
VMP1-203ENST00000586245 DHRS3O75911 302 aa11.65□□□□□ -0.54
VMP1-203ENST00000586245 ISG15P05161 165 aa11.65□□□□□ -0.54
VMP1-203ENST00000586245 CELP19835 753 aa11.65□□□□□ -0.54
VMP1-203ENST00000586245 ACHEP22303 614 aa11.65□□□□□ -0.54
VMP1-203ENST00000586245 ALDH3B1P43353 468 aa11.65□□□□□ -0.54
VMP1-203ENST00000586245 KRTAP10-9P60411 292 aa11.65□□□□□ -0.54
VMP1-203ENST00000586245 OR8B8Q15620 311 aa11.65□□□□□ -0.54
VMP1-203ENST00000586245 ALKBH6Q3KRA9 238 aa11.65□□□□□ -0.54
VMP1-203ENST00000586245 DMKNQ6E0U4 476 aaPredicted RBP11.65□□□□□ -0.54
VMP1-203ENST00000586245 C11orf71Q6IPW1 123 aa11.65□□□□□ -0.54
VMP1-203ENST00000586245 PAMR1Q6UXH9 720 aa11.65□□□□□ -0.54
VMP1-203ENST00000586245 RDH10Q8IZV5 341 aa11.65□□□□□ -0.54
VMP1-203ENST00000586245 FTMTQ8N4E7 242 aa11.65□□□□□ -0.54
VMP1-203ENST00000586245 CSNK2A3Q8NEV1 391 aa11.65□□□□□ -0.54
VMP1-203ENST00000586245 SEMA6DQ8NFY4 1073 aa11.65□□□□□ -0.54
VMP1-203ENST00000586245 OR8G5Q8NG78 346 aa11.65□□□□□ -0.54
VMP1-203ENST00000586245 OR56B2PQ8NGI1 322 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms