RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 CX3CR1P49238 355 aa14.99□□□□□ -0.01
ERBB2-221ENST00000584888 SRP9P49458 86 aaKnown RBP14.99□□□□□ -0.01
ERBB2-221ENST00000584888 MMP16P51512 607 aa14.99□□□□□ -0.01
ERBB2-221ENST00000584888 ACTR3P61158 418 aa14.99□□□□□ -0.01
ERBB2-221ENST00000584888 APOFQ13790 326 aa14.99□□□□□ -0.01
ERBB2-221ENST00000584888 ZNF181Q2M3W8 571 aa14.99□□□□□ -0.01
ERBB2-221ENST00000584888 KLHL12Q53G59 568 aa14.99□□□□□ -0.01
ERBB2-221ENST00000584888 C12orf73Q69YU5 71 aa14.99□□□□□ -0.01
ERBB2-221ENST00000584888 CCDC121Q6ZUS5 278 aa14.99□□□□□ -0.01
ERBB2-221ENST00000584888 ZNF771Q7L3S4 317 aaPredicted RBP14.99□□□□□ -0.01
ERBB2-221ENST00000584888 PEG10Q86TG7 708 aaKnown RBP14.99□□□□□ -0.01
ERBB2-221ENST00000584888 OR4M2Q8NGB6 313 aa14.99□□□□□ -0.01
ERBB2-221ENST00000584888 SGK3Q96BR1 496 aa14.99□□□□□ -0.01
ERBB2-221ENST00000584888 ZNF319Q9P2F9 582 aa14.99□□□□□ -0.01
ERBB2-221ENST00000584888 PCDHB10Q9UN67 800 aa14.99□□□□□ -0.01
ERBB2-221ENST00000584888 KLHDC2Q9Y2U9 406 aa14.99□□□□□ -0.01
ERBB2-221ENST00000584888 NBEAL1Q6ZS30 2694 aa14.99□□□□□ -0.01
ERBB2-221ENST00000584888 ISPDA4D126 451 aa14.98□□□□□ -0.01
ERBB2-221ENST00000584888 J3QLI3 93 aa14.98□□□□□ -0.01
ERBB2-221ENST00000584888 XRCC2O43543 280 aa14.98□□□□□ -0.01
ERBB2-221ENST00000584888 PTBP3O95758 552 aaKnown RBP14.98□□□□□ -0.01
ERBB2-221ENST00000584888 APOC1P02654 83 aa14.98□□□□□ -0.01
ERBB2-221ENST00000584888 LYNP07948 512 aa14.98□□□□□ -0.01
ERBB2-221ENST00000584888 RAD23AP54725 363 aa14.98□□□□□ -0.01
ERBB2-221ENST00000584888 ZMYND11Q15326 602 aa14.98□□□□□ -0.01
ERBB2-221ENST00000584888 TMEM155Q4W5P6 130 aa14.98□□□□□ -0.01
ERBB2-221ENST00000584888 DCAF12L2Q5VW00 463 aa14.98□□□□□ -0.01
ERBB2-221ENST00000584888 C12orf54Q6X4T0 127 aa14.98□□□□□ -0.01
ERBB2-221ENST00000584888 SPRYD4Q8WW59 207 aaPredicted RBP14.98□□□□□ -0.01
ERBB2-221ENST00000584888 YIPF3Q9GZM5 350 aa14.98□□□□□ -0.01
ERBB2-221ENST00000584888 SLC22A4Q9H015 551 aa14.98□□□□□ -0.01
ERBB2-221ENST00000584888 OPA3Q9H6K4 179 aa14.98□□□□□ -0.01
ERBB2-221ENST00000584888 H3BNX3 289 aa14.97□□□□□ -0.01
ERBB2-221ENST00000584888 FSTL3O95633 263 aa14.97□□□□□ -0.01
ERBB2-221ENST00000584888 SBK2P0C263 348 aa14.97□□□□□ -0.01
ERBB2-221ENST00000584888 NAA10P41227 235 aaPredicted RBP14.97□□□□□ -0.01
ERBB2-221ENST00000584888 ZNF121P58317 390 aaPredicted RBP14.97□□□□□ -0.01
ERBB2-221ENST00000584888 FAM3AP98173 230 aa14.97□□□□□ -0.01
ERBB2-221ENST00000584888 AADACL4Q5VUY2 407 aa14.97□□□□□ -0.01
ERBB2-221ENST00000584888 SLC16A9Q7RTY1 509 aa14.97□□□□□ -0.01
ERBB2-221ENST00000584888 C1QL2Q7Z5L3 287 aa14.97□□□□□ -0.01
ERBB2-221ENST00000584888 ZNF420Q8TAQ5 688 aaPredicted RBP14.97□□□□□ -0.01
ERBB2-221ENST00000584888 Q8TCH9 128 aa14.97□□□□□ -0.01
ERBB2-221ENST00000584888 THEM6Q8WUY1 208 aa14.97□□□□□ -0.01
ERBB2-221ENST00000584888 PYDC1Q8WXC3 89 aa14.97□□□□□ -0.01
ERBB2-221ENST00000584888 CIB1Q99828 191 aa14.97□□□□□ -0.01
ERBB2-221ENST00000584888 OSBPL10Q9BXB5 764 aa14.97□□□□□ -0.01
ERBB2-221ENST00000584888 SEMA6AQ9H2E6 1030 aa14.97□□□□□ -0.01
ERBB2-221ENST00000584888 SP140LQ9H930 580 aa14.97□□□□□ -0.01
ERBB2-221ENST00000584888 UBAP1Q9NZ09 502 aa14.97□□□□□ -0.01
ERBB2-221ENST00000584888 MRPL15Q9P015 296 aaKnown RBP14.97□□□□□ -0.01
ERBB2-221ENST00000584888 OAZ3Q9UMX2 235 aa14.97□□□□□ -0.01
ERBB2-221ENST00000584888 GGT3PA6NGU5 568 aa14.96□□□□□ -0.01
ERBB2-221ENST00000584888 F5H0A9 414 aaPredicted RBP14.96□□□□□ -0.01
ERBB2-221ENST00000584888 GMDSO60547 372 aa14.96□□□□□ -0.01
ERBB2-221ENST00000584888 H2BFMP0C1H6 154 aa14.96□□□□□ -0.01
ERBB2-221ENST00000584888 ADRA2CP18825 462 aa14.96□□□□□ -0.01
ERBB2-221ENST00000584888 CA6P23280 308 aa14.96□□□□□ -0.01
ERBB2-221ENST00000584888 GATA3P23771 443 aa14.96□□□□□ -0.01
ERBB2-221ENST00000584888 HSD11B1P28845 292 aa14.96□□□□□ -0.01
ERBB2-221ENST00000584888 DDOSTP39656 456 aa14.96□□□□□ -0.01
ERBB2-221ENST00000584888 HCCSP53701 268 aa14.96□□□□□ -0.01
ERBB2-221ENST00000584888 HILS1P60008 231 aa14.96□□□□□ -0.01
ERBB2-221ENST00000584888 BTG1P62324 171 aa14.96□□□□□ -0.01
ERBB2-221ENST00000584888 LCN2P80188 198 aa14.96□□□□□ -0.01
ERBB2-221ENST00000584888 KPNB1Q14974 876 aaKnown RBP14.96□□□□□ -0.01
ERBB2-221ENST00000584888 USP43Q70EL4 1123 aa14.96□□□□□ -0.01
ERBB2-221ENST00000584888 BCDIN3DQ7Z5W3 292 aaKnown RBP14.96□□□□□ -0.01
ERBB2-221ENST00000584888 MOGAT3Q86VF5 341 aa14.96□□□□□ -0.01
ERBB2-221ENST00000584888 OR56B2PQ8NGI1 322 aa14.96□□□□□ -0.01
ERBB2-221ENST00000584888 OR52H1Q8NGJ2 320 aa14.96□□□□□ -0.01
ERBB2-221ENST00000584888 NANPQ8TBE9 248 aa14.96□□□□□ -0.01
ERBB2-221ENST00000584888 TMEM163Q8TC26 289 aa14.96□□□□□ -0.01
ERBB2-221ENST00000584888 ERGIC1Q969X5 290 aa14.96□□□□□ -0.01
ERBB2-221ENST00000584888 C7orf69Q9H7B7 122 aa14.96□□□□□ -0.01
ERBB2-221ENST00000584888 PATZ1Q9HBE1 687 aaKnown RBP14.96□□□□□ -0.01
ERBB2-221ENST00000584888 TMEM165Q9HC07 324 aa14.96□□□□□ -0.01
ERBB2-221ENST00000584888 POLR3KQ9Y2Y1 108 aaPredicted RBP14.96□□□□□ -0.01
ERBB2-221ENST00000584888 NOP16Q9Y3C1 178 aaKnown RBP14.96□□□□□ -0.01
ERBB2-221ENST00000584888 hCG_38984A0A1B0GV85 526 aa14.95□□□□□ -0.02
ERBB2-221ENST00000584888 M0R129 80 aa14.95□□□□□ -0.02
ERBB2-221ENST00000584888 ANXA2P07355 339 aaKnown RBP14.95□□□□□ -0.02
ERBB2-221ENST00000584888 ZFP36P26651 326 aaKnown RBP14.95□□□□□ -0.02
ERBB2-221ENST00000584888 POLR2IP36954 125 aaKnown RBP14.95□□□□□ -0.02
ERBB2-221ENST00000584888 RPS7P62081 194 aaKnown RBP14.95□□□□□ -0.02
ERBB2-221ENST00000584888 OR8G1Q15617 311 aa14.95□□□□□ -0.02
ERBB2-221ENST00000584888 DEGS2Q6QHC5 323 aa14.95□□□□□ -0.02
ERBB2-221ENST00000584888 FAM57BQ71RH2 274 aa14.95□□□□□ -0.02
ERBB2-221ENST00000584888 MEPCEQ7L2J0 689 aaKnown RBP14.95□□□□□ -0.02
ERBB2-221ENST00000584888 KLBQ86Z14 1044 aa14.95□□□□□ -0.02
ERBB2-221ENST00000584888 TCEANCQ8N8B7 351 aa14.95□□□□□ -0.02
ERBB2-221ENST00000584888 PLPP7Q8NBV4 271 aa14.95□□□□□ -0.02
ERBB2-221ENST00000584888 REEP6Q96HR9 211 aa14.95□□□□□ -0.02
ERBB2-221ENST00000584888 PKP2Q99959 881 aa14.95□□□□□ -0.02
ERBB2-221ENST00000584888 GABARAPL3Q9BY60 117 aa14.95□□□□□ -0.02
ERBB2-221ENST00000584888 PRRG3Q9BZD7 231 aa14.95□□□□□ -0.02
ERBB2-221ENST00000584888 NIPAL2Q9H841 368 aa14.95□□□□□ -0.02
ERBB2-221ENST00000584888 DNAJC27Q9NZQ0 273 aa14.95□□□□□ -0.02
ERBB2-221ENST00000584888 OPN4Q9UHM6 478 aa14.95□□□□□ -0.02
ERBB2-221ENST00000584888 ENOPH1Q9UHY7 261 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms