RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 GGT3PA6NGU5 568 aa11.46□□□□□ -0.57
CSNK1D-224ENST00000584672 POLR3GO15318 223 aaPredicted RBP11.46□□□□□ -0.57
CSNK1D-224ENST00000584672 PTBP3O95758 552 aaKnown RBP11.46□□□□□ -0.57
CSNK1D-224ENST00000584672 LHBP01229 141 aa11.46□□□□□ -0.57
CSNK1D-224ENST00000584672 GPR4P46093 362 aa11.46□□□□□ -0.57
CSNK1D-224ENST00000584672 SLC18A1P54219 525 aa11.46□□□□□ -0.57
CSNK1D-224ENST00000584672 ACSM1Q08AH1 577 aa11.46□□□□□ -0.57
CSNK1D-224ENST00000584672 KRR1Q13601 381 aaKnown RBP11.46□□□□□ -0.57
CSNK1D-224ENST00000584672 MICBQ29980 383 aa11.46□□□□□ -0.57
CSNK1D-224ENST00000584672 C11orf91Q3C1V1 193 aa11.46□□□□□ -0.57
CSNK1D-224ENST00000584672 CFAP77Q6ZQR2 320 aa11.46□□□□□ -0.57
CSNK1D-224ENST00000584672 SLC36A1Q7Z2H8 476 aa11.46□□□□□ -0.57
CSNK1D-224ENST00000584672 GJC3Q8NFK1 279 aa11.46□□□□□ -0.57
CSNK1D-224ENST00000584672 OR10A6Q8NH74 314 aa11.46□□□□□ -0.57
CSNK1D-224ENST00000584672 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.46□□□□□ -0.57
CSNK1D-224ENST00000584672 TSSK2Q96PF2 358 aa11.46□□□□□ -0.57
CSNK1D-224ENST00000584672 CGREF1Q99674 301 aa11.46□□□□□ -0.57
CSNK1D-224ENST00000584672 PITX2Q99697 317 aa11.46□□□□□ -0.57
CSNK1D-224ENST00000584672 TMEM109Q9BVC6 243 aa11.46□□□□□ -0.57
CSNK1D-224ENST00000584672 RHCGQ9UBD6 479 aa11.46□□□□□ -0.57
CSNK1D-224ENST00000584672 SOCS2O14508 198 aa11.45□□□□□ -0.58
CSNK1D-224ENST00000584672 GMDSO60547 372 aa11.45□□□□□ -0.58
CSNK1D-224ENST00000584672 CD14P08571 375 aa11.45□□□□□ -0.58
CSNK1D-224ENST00000584672 AMY2BP19961 511 aa11.45□□□□□ -0.58
CSNK1D-224ENST00000584672 GGT2P36268 569 aa11.45□□□□□ -0.58
CSNK1D-224ENST00000584672 YAP1P46937 504 aaKnown RBP11.45□□□□□ -0.58
CSNK1D-224ENST00000584672 CSNK2BP67870 215 aa11.45□□□□□ -0.58
CSNK1D-224ENST00000584672 HIST1H3AP68431 136 aa11.45□□□□□ -0.58
CSNK1D-224ENST00000584672 ZNF92Q03936 586 aa11.45□□□□□ -0.58
CSNK1D-224ENST00000584672 HIST2H3PS2Q5TEC6 136 aa11.45□□□□□ -0.58
CSNK1D-224ENST00000584672 NCR3LG1Q68D85 454 aa11.45□□□□□ -0.58
CSNK1D-224ENST00000584672 HCP5Q6MZN7 132 aa11.45□□□□□ -0.58
CSNK1D-224ENST00000584672 EPGNQ6UW88 154 aa11.45□□□□□ -0.58
CSNK1D-224ENST00000584672 Q6ZS46 218 aa11.45□□□□□ -0.58
CSNK1D-224ENST00000584672 HIST2H3AQ71DI3 136 aa11.45□□□□□ -0.58
CSNK1D-224ENST00000584672 RNF144BQ7Z419 303 aa11.45□□□□□ -0.58
CSNK1D-224ENST00000584672 TMEM219Q86XT9 240 aa11.45□□□□□ -0.58
CSNK1D-224ENST00000584672 PAPD5Q8NDF8 572 aaKnown RBP11.45□□□□□ -0.58
CSNK1D-224ENST00000584672 WIPF2Q8TF74 440 aaPredicted RBP11.45□□□□□ -0.58
CSNK1D-224ENST00000584672 RASSF5Q8WWW0 418 aa11.45□□□□□ -0.58
CSNK1D-224ENST00000584672 EBF4Q9BQW3 602 aa11.45□□□□□ -0.58
CSNK1D-224ENST00000584672 CDCA4Q9BXL8 241 aa11.45□□□□□ -0.58
CSNK1D-224ENST00000584672 SLC22A4Q9H015 551 aa11.45□□□□□ -0.58
CSNK1D-224ENST00000584672 NUAK2Q9H093 628 aa11.45□□□□□ -0.58
CSNK1D-224ENST00000584672 KAT8Q9H7Z6 458 aaKnown RBP11.45□□□□□ -0.58
CSNK1D-224ENST00000584672 METTL8Q9H825 291 aaKnown RBP11.45□□□□□ -0.58
CSNK1D-224ENST00000584672 ELL3Q9HB65 397 aaPredicted RBP11.45□□□□□ -0.58
CSNK1D-224ENST00000584672 SNTG1Q9NSN8 517 aa11.45□□□□□ -0.58
CSNK1D-224ENST00000584672 VSX1Q9NZR4 365 aaPredicted RBP11.45□□□□□ -0.58
CSNK1D-224ENST00000584672 NOP16Q9Y3C1 178 aaKnown RBP11.45□□□□□ -0.58
CSNK1D-224ENST00000584672 STAB2Q8WWQ8 2551 aa11.44□□□□□ -0.58
CSNK1D-224ENST00000584672 C3orf84H3BNL1 204 aa11.44□□□□□ -0.58
CSNK1D-224ENST00000584672 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.44□□□□□ -0.58
CSNK1D-224ENST00000584672 POU1F1P28069 291 aa11.44□□□□□ -0.58
CSNK1D-224ENST00000584672 MRPL19P49406 292 aaKnown RBP11.44□□□□□ -0.58
CSNK1D-224ENST00000584672 RAB13P51153 203 aa11.44□□□□□ -0.58
CSNK1D-224ENST00000584672 TRAP1Q12931 704 aaKnown RBP11.44□□□□□ -0.58
CSNK1D-224ENST00000584672 VMACQ2NL98 169 aa11.44□□□□□ -0.58
CSNK1D-224ENST00000584672 SNAI3Q3KNW1 292 aa11.44□□□□□ -0.58
CSNK1D-224ENST00000584672 LRRC10Q5BKY1 277 aa11.44□□□□□ -0.58
CSNK1D-224ENST00000584672 DMRTC1Q5HYR2 192 aa11.44□□□□□ -0.58
CSNK1D-224ENST00000584672 CCDC121Q6ZUS5 278 aa11.44□□□□□ -0.58
CSNK1D-224ENST00000584672 PTCHD4Q6ZW05 846 aa11.44□□□□□ -0.58
CSNK1D-224ENST00000584672 FAM122BQ7Z309 247 aa11.44□□□□□ -0.58
CSNK1D-224ENST00000584672 WDR86Q86TI4 376 aa11.44□□□□□ -0.58
CSNK1D-224ENST00000584672 PLPP7Q8NBV4 271 aa11.44□□□□□ -0.58
CSNK1D-224ENST00000584672 PIFOQ8TCI5 191 aa11.44□□□□□ -0.58
CSNK1D-224ENST00000584672 RCC1LQ96I51 464 aaKnown RBP11.44□□□□□ -0.58
CSNK1D-224ENST00000584672 POLR2J2Q9GZM3 115 aaKnown RBP11.44□□□□□ -0.58
CSNK1D-224ENST00000584672 POLR2J3Q9H1A7 115 aaKnown RBP11.44□□□□□ -0.58
CSNK1D-224ENST00000584672 ZNF391Q9UJN7 358 aa11.44□□□□□ -0.58
CSNK1D-224ENST00000584672 BAG5Q9UL15 447 aa11.44□□□□□ -0.58
CSNK1D-224ENST00000584672 SF3B6Q9Y3B4 125 aaKnown RBP11.44□□□□□ -0.58
CSNK1D-224ENST00000584672 SACSQ9NZJ4 4579 aa11.43□□□□□ -0.58
CSNK1D-224ENST00000584672 TRBV23-1A0A0A0MS06 115 aa11.43□□□□□ -0.58
CSNK1D-224ENST00000584672 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.43□□□□□ -0.58
CSNK1D-224ENST00000584672 TMEM120BA0PK00 339 aa11.43□□□□□ -0.58
CSNK1D-224ENST00000584672 H0YAE9 185 aa11.43□□□□□ -0.58
CSNK1D-224ENST00000584672 DCTN6O00399 190 aa11.43□□□□□ -0.58
CSNK1D-224ENST00000584672 CDC42EP2O14613 210 aa11.43□□□□□ -0.58
CSNK1D-224ENST00000584672 CCDC159P0C7I6 412 aa11.43□□□□□ -0.58
CSNK1D-224ENST00000584672 MUC1P15941 1255 aaPredicted RBP11.43□□□□□ -0.58
CSNK1D-224ENST00000584672 NDUFB7P17568 137 aa11.43□□□□□ -0.58
CSNK1D-224ENST00000584672 PRKCDQ05655 676 aa11.43□□□□□ -0.58
CSNK1D-224ENST00000584672 ST3GAL3Q11203 375 aa11.43□□□□□ -0.58
CSNK1D-224ENST00000584672 KCNMB1Q16558 191 aa11.43□□□□□ -0.58
CSNK1D-224ENST00000584672 KRTAP27-1Q3LI81 207 aa11.43□□□□□ -0.58
CSNK1D-224ENST00000584672 C11orf53Q8IXP5 236 aa11.43□□□□□ -0.58
CSNK1D-224ENST00000584672 OR56B2PQ8NGI1 322 aa11.43□□□□□ -0.58
CSNK1D-224ENST00000584672 OR9Q1Q8NGQ5 310 aa11.43□□□□□ -0.58
CSNK1D-224ENST00000584672 C8orf46Q8TAG6 207 aa11.43□□□□□ -0.58
CSNK1D-224ENST00000584672 DUS3LQ96G46 650 aaKnown RBP11.43□□□□□ -0.58
CSNK1D-224ENST00000584672 MEGF9Q9H1U4 602 aa11.43□□□□□ -0.58
CSNK1D-224ENST00000584672 A4GNTQ9UNA3 340 aa11.43□□□□□ -0.58
CSNK1D-224ENST00000584672 N6AMT1Q9Y5N5 214 aa11.43□□□□□ -0.58
CSNK1D-224ENST00000584672 M0R1W7 72 aa11.42□□□□□ -0.58
CSNK1D-224ENST00000584672 BHLHE40O14503 412 aa11.42□□□□□ -0.58
CSNK1D-224ENST00000584672 AHCYL1O43865 530 aa11.42□□□□□ -0.58
CSNK1D-224ENST00000584672 CHRM2P08172 466 aa11.42□□□□□ -0.58
CSNK1D-224ENST00000584672 FAHP16930 419 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms