RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 MAB21L1Q13394 359 aa17.17■□□□□ 0.34
SS18-224ENST00000584083 PTGES3Q15185 160 aaKnown RBP17.17■□□□□ 0.34
SS18-224ENST00000584083 RHOUQ7L0Q8 258 aa17.17■□□□□ 0.34
SS18-224ENST00000584083 ZDHHC13Q8IUH4 622 aa17.17■□□□□ 0.34
SS18-224ENST00000584083 C1orf87Q8N0U7 546 aa17.17■□□□□ 0.34
SS18-224ENST00000584083 MUC20Q8N307 709 aaPredicted RBP17.17■□□□□ 0.34
SS18-224ENST00000584083 CELF2-AS1Q8N7Q2 184 aa17.17■□□□□ 0.34
SS18-224ENST00000584083 OR56B2PQ8NGI1 322 aa17.17■□□□□ 0.34
SS18-224ENST00000584083 OR11L1Q8NGX0 322 aa17.17■□□□□ 0.34
SS18-224ENST00000584083 UFSP2Q9NUQ7 469 aa17.17■□□□□ 0.34
SS18-224ENST00000584083 DOCK11Q5JSL3 2073 aa17.16■□□□□ 0.34
SS18-224ENST00000584083 GMDSO60547 372 aa17.16■□□□□ 0.34
SS18-224ENST00000584083 MITFO75030 526 aaPredicted RBP17.16■□□□□ 0.34
SS18-224ENST00000584083 SLC2A5P22732 501 aa17.16■□□□□ 0.34
SS18-224ENST00000584083 PMELP40967 661 aa17.16■□□□□ 0.34
SS18-224ENST00000584083 CD200P41217 278 aa17.16■□□□□ 0.34
SS18-224ENST00000584083 GATA4P43694 442 aa17.16■□□□□ 0.34
SS18-224ENST00000584083 ZNF181Q2M3W8 571 aa17.16■□□□□ 0.34
SS18-224ENST00000584083 PRAMEF6Q5VXH4 476 aa17.16■□□□□ 0.34
SS18-224ENST00000584083 TEX29Q8N6K0 151 aa17.16■□□□□ 0.34
SS18-224ENST00000584083 OR52H1Q8NGJ2 320 aa17.16■□□□□ 0.34
SS18-224ENST00000584083 LRTOMTQ8WZ04 291 aa17.16■□□□□ 0.34
SS18-224ENST00000584083 DUS3LQ96G46 650 aaKnown RBP17.16■□□□□ 0.34
SS18-224ENST00000584083 PGAM5Q96HS1 289 aa17.16■□□□□ 0.34
SS18-224ENST00000584083 PRRG3Q9BZD7 231 aa17.16■□□□□ 0.34
SS18-224ENST00000584083 OR10A2Q9H208 303 aa17.16■□□□□ 0.34
SS18-224ENST00000584083 MRPL15Q9P015 296 aaKnown RBP17.16■□□□□ 0.34
SS18-224ENST00000584083 CUBNO60494 3623 aa17.15■□□□□ 0.34
SS18-224ENST00000584083 ANKRD30BLA7E2S9 258 aa17.15■□□□□ 0.34
SS18-224ENST00000584083 J3QLI3 93 aa17.15■□□□□ 0.34
SS18-224ENST00000584083 GATA3P23771 443 aa17.15■□□□□ 0.34
SS18-224ENST00000584083 ZFP36P26651 326 aaKnown RBP17.15■□□□□ 0.34
SS18-224ENST00000584083 DDOSTP39656 456 aa17.15■□□□□ 0.34
SS18-224ENST00000584083 SRSF2Q01130 221 aaKnown RBP17.15■□□□□ 0.34
SS18-224ENST00000584083 MPPED2Q15777 294 aa17.15■□□□□ 0.34
SS18-224ENST00000584083 GFOD2Q3B7J2 385 aa17.15■□□□□ 0.34
SS18-224ENST00000584083 SLC16A9Q7RTY1 509 aa17.15■□□□□ 0.34
SS18-224ENST00000584083 DVL3Q92997 716 aaPredicted RBP17.15■□□□□ 0.34
SS18-224ENST00000584083 ERGIC1Q969X5 290 aa17.15■□□□□ 0.34
SS18-224ENST00000584083 SPSB4Q96A44 273 aa17.15■□□□□ 0.34
SS18-224ENST00000584083 SGK3Q96BR1 496 aa17.15■□□□□ 0.34
SS18-224ENST00000584083 REEP6Q96HR9 211 aa17.15■□□□□ 0.34
SS18-224ENST00000584083 TMPRSS13Q9BYE2 586 aa17.15■□□□□ 0.34
SS18-224ENST00000584083 OCEL1Q9H607 264 aa17.15■□□□□ 0.34
SS18-224ENST00000584083 LAMP5Q9UJQ1 280 aa17.15■□□□□ 0.34
SS18-224ENST00000584083 KLHDC2Q9Y2U9 406 aa17.15■□□□□ 0.34
SS18-224ENST00000584083 PPIAL4EA0A075B759 164 aa17.14■□□□□ 0.33
SS18-224ENST00000584083 LOC105371242A0A075B767 164 aa17.14■□□□□ 0.33
SS18-224ENST00000584083 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.14■□□□□ 0.33
SS18-224ENST00000584083 CEACAM18A8MTB9 384 aa17.14■□□□□ 0.33
SS18-224ENST00000584083 PPIAL4DF5H284 164 aa17.14■□□□□ 0.33
SS18-224ENST00000584083 FAM20BO75063 409 aa17.14■□□□□ 0.33
SS18-224ENST00000584083 AVPP01185 164 aa17.14■□□□□ 0.33
SS18-224ENST00000584083 PPIAL4FP0DN26 164 aa17.14■□□□□ 0.33
SS18-224ENST00000584083 CFL1P23528 166 aaKnown RBP17.14■□□□□ 0.33
SS18-224ENST00000584083 HCCSP53701 268 aa17.14■□□□□ 0.33
SS18-224ENST00000584083 SEC61A1P61619 476 aaKnown RBP17.14■□□□□ 0.33
SS18-224ENST00000584083 FAM3AP98173 230 aa17.14■□□□□ 0.33
SS18-224ENST00000584083 SCGB2A2Q13296 93 aa17.14■□□□□ 0.33
SS18-224ENST00000584083 ESCO2Q56NI9 601 aa17.14■□□□□ 0.33
SS18-224ENST00000584083 FAM201AQ5SY85 155 aa17.14■□□□□ 0.33
SS18-224ENST00000584083 LCN1P1Q5VSP4 162 aa17.14■□□□□ 0.33
SS18-224ENST00000584083 LIPNQ5VXI9 398 aa17.14■□□□□ 0.33
SS18-224ENST00000584083 CCDC121Q6ZUS5 278 aa17.14■□□□□ 0.33
SS18-224ENST00000584083 PRSS45Q7RTY3 260 aa17.14■□□□□ 0.33
SS18-224ENST00000584083 KRT77Q7Z794 578 aa17.14■□□□□ 0.33
SS18-224ENST00000584083 RFLNBQ8N5W9 214 aa17.14■□□□□ 0.33
SS18-224ENST00000584083 TEAD3Q99594 435 aa17.14■□□□□ 0.33
SS18-224ENST00000584083 C7orf69Q9H7B7 122 aa17.14■□□□□ 0.33
SS18-224ENST00000584083 FN3KRPQ9HA64 309 aa17.14■□□□□ 0.33
SS18-224ENST00000584083 TMEM165Q9HC07 324 aa17.14■□□□□ 0.33
SS18-224ENST00000584083 PPIAL4AQ9Y536 164 aa17.14■□□□□ 0.33
SS18-224ENST00000584083 F5H0A9 414 aaPredicted RBP17.13■□□□□ 0.33
SS18-224ENST00000584083 TCF21O43680 179 aa17.13■□□□□ 0.33
SS18-224ENST00000584083 PRKYO43930 277 aa17.13■□□□□ 0.33
SS18-224ENST00000584083 GRPP07492 148 aa17.13■□□□□ 0.33
SS18-224ENST00000584083 MRPL3P09001 348 aaKnown RBP17.13■□□□□ 0.33
SS18-224ENST00000584083 RPS2P15880 293 aaKnown RBP17.13■□□□□ 0.33
SS18-224ENST00000584083 MZT1Q08AG7 82 aa17.13■□□□□ 0.33
SS18-224ENST00000584083 KDM4DQ6B0I6 523 aa17.13■□□□□ 0.33
SS18-224ENST00000584083 LRRN1Q6UXK5 716 aa17.13■□□□□ 0.33
SS18-224ENST00000584083 C1orf229Q6ZS94 237 aaPredicted RBP17.13■□□□□ 0.33
SS18-224ENST00000584083 ASRGL1Q7L266 308 aa17.13■□□□□ 0.33
SS18-224ENST00000584083 KLBQ86Z14 1044 aa17.13■□□□□ 0.33
SS18-224ENST00000584083 SPERTQ8NA61 448 aa17.13■□□□□ 0.33
SS18-224ENST00000584083 SPATA3Q8NHX4 192 aa17.13■□□□□ 0.33
SS18-224ENST00000584083 Q8TCH9 128 aa17.13■□□□□ 0.33
SS18-224ENST00000584083 TMEM246Q9BRR3 403 aa17.13■□□□□ 0.33
SS18-224ENST00000584083 YIPF3Q9GZM5 350 aa17.13■□□□□ 0.33
SS18-224ENST00000584083 GABARAPL1Q9H0R8 117 aa17.13■□□□□ 0.33
SS18-224ENST00000584083 SEMA6AQ9H2E6 1030 aa17.13■□□□□ 0.33
SS18-224ENST00000584083 H2AFY2Q9P0M6 372 aaPredicted RBP17.13■□□□□ 0.33
SS18-224ENST00000584083 ZNF319Q9P2F9 582 aa17.13■□□□□ 0.33
SS18-224ENST00000584083 ENOPH1Q9UHY7 261 aa17.13■□□□□ 0.33
SS18-224ENST00000584083 SVEP1Q4LDE5 3571 aa17.12■□□□□ 0.33
SS18-224ENST00000584083 CCDC182A6NF36 153 aa17.12■□□□□ 0.33
SS18-224ENST00000584083 A6NLC8 198 aa17.12■□□□□ 0.33
SS18-224ENST00000584083 M0R129 80 aa17.12■□□□□ 0.33
SS18-224ENST00000584083 WNT2P09544 360 aa17.12■□□□□ 0.33
SS18-224ENST00000584083 ALOX5APP20292 161 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms