RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 ITIH4Q14624 930 aa2.07□□□□□ -2.08
PPP4R1-227ENST00000583988 TRMT5Q32P41 509 aaKnown RBP2.07□□□□□ -2.08
PPP4R1-227ENST00000583988 GCSAMLQ5JQS6 135 aa2.07□□□□□ -2.08
PPP4R1-227ENST00000583988 C12orf54Q6X4T0 127 aa2.07□□□□□ -2.08
PPP4R1-227ENST00000583988 RTL4Q6ZR62 310 aa2.07□□□□□ -2.08
PPP4R1-227ENST00000583988 ERO1BQ86YB8 467 aa2.07□□□□□ -2.08
PPP4R1-227ENST00000583988 MIR7-3HGQ8N6C7 128 aa2.07□□□□□ -2.08
PPP4R1-227ENST00000583988 OR10W1Q8NGF6 305 aa2.07□□□□□ -2.08
PPP4R1-227ENST00000583988 OR52K2Q8NGK3 314 aa2.07□□□□□ -2.08
PPP4R1-227ENST00000583988 ITFG1Q8TB96 612 aa2.07□□□□□ -2.08
PPP4R1-227ENST00000583988 CD209Q9NNX6 404 aa2.07□□□□□ -2.08
PPP4R1-227ENST00000583988 RRAGDQ9NQL2 400 aaPredicted RBP2.07□□□□□ -2.08
PPP4R1-227ENST00000583988 TREX1Q9NSU2 369 aa2.07□□□□□ -2.08
PPP4R1-227ENST00000583988 PCDH11XQ9BZA7 1347 aa2.07□□□□□ -2.08
PPP4R1-227ENST00000583988 BRCA1P38398 1863 aaKnown RBP2.07□□□□□ -2.08
PPP4R1-227ENST00000583988 DOCK8Q8NF50 2099 aa2.06□□□□□ -2.08
PPP4R1-227ENST00000583988 TSPOAP1O95153 1857 aa2.06□□□□□ -2.08
PPP4R1-227ENST00000583988 TRAV25A0A0B4J276 109 aa2.06□□□□□ -2.08
PPP4R1-227ENST00000583988 IGHV1-3A0A0C4DH29 117 aa2.06□□□□□ -2.08
PPP4R1-227ENST00000583988 BCKDKO14874 412 aa2.06□□□□□ -2.08
PPP4R1-227ENST00000583988 FCN3O75636 299 aa2.06□□□□□ -2.08
PPP4R1-227ENST00000583988 MT-ND4P03905 459 aa2.06□□□□□ -2.08
PPP4R1-227ENST00000583988 ZNF806P0C7X5 589 aa2.06□□□□□ -2.08
PPP4R1-227ENST00000583988 PGA4P0DJD7 388 aa2.06□□□□□ -2.08
PPP4R1-227ENST00000583988 PGA3P0DJD8 388 aa2.06□□□□□ -2.08
PPP4R1-227ENST00000583988 CD37P11049 281 aa2.06□□□□□ -2.08
PPP4R1-227ENST00000583988 LOXP28300 417 aaPredicted RBP2.06□□□□□ -2.08
PPP4R1-227ENST00000583988 POLR2IP36954 125 aaKnown RBP2.06□□□□□ -2.08
PPP4R1-227ENST00000583988 KIR3DL2P43630 455 aa2.06□□□□□ -2.08
PPP4R1-227ENST00000583988 PPICP45877 212 aa2.06□□□□□ -2.08
PPP4R1-227ENST00000583988 PRLHRP49683 370 aa2.06□□□□□ -2.08
PPP4R1-227ENST00000583988 UBE2E1P51965 193 aa2.06□□□□□ -2.08
PPP4R1-227ENST00000583988 IFITM3Q01628 133 aa2.06□□□□□ -2.08
PPP4R1-227ENST00000583988 ZNF266Q14584 549 aa2.06□□□□□ -2.08
PPP4R1-227ENST00000583988 ZNF829Q3KNS6 432 aaPredicted RBP2.06□□□□□ -2.08
PPP4R1-227ENST00000583988 TMPRSS11AQ6ZMR5 421 aa2.06□□□□□ -2.08
PPP4R1-227ENST00000583988 MDP1Q86V88 176 aa2.06□□□□□ -2.08
PPP4R1-227ENST00000583988 VKORC1L1Q8N0U8 176 aa2.06□□□□□ -2.08
PPP4R1-227ENST00000583988 OR1J4Q8NGS1 313 aa2.06□□□□□ -2.08
PPP4R1-227ENST00000583988 EMC6Q9BV81 110 aa2.06□□□□□ -2.08
PPP4R1-227ENST00000583988 SLC7A5P2Q9GIP4 190 aa2.06□□□□□ -2.08
PPP4R1-227ENST00000583988 WFDC1Q9HC57 220 aa2.06□□□□□ -2.08
PPP4R1-227ENST00000583988 ACP6Q9NPH0 428 aa2.06□□□□□ -2.08
PPP4R1-227ENST00000583988 PTTG3PQ9NZH4 202 aa2.06□□□□□ -2.08
PPP4R1-227ENST00000583988 TBC1D24Q9ULP9 559 aa2.06□□□□□ -2.08
PPP4R1-227ENST00000583988 UBN2Q6ZU65 1347 aa2.06□□□□□ -2.08
PPP4R1-227ENST00000583988 YEATS2Q9ULM3 1422 aa2.06□□□□□ -2.08
PPP4R1-227ENST00000583988 IGHV3OR16-8A0A075B7F1 116 aa2.05□□□□□ -2.08
PPP4R1-227ENST00000583988 SMIM26A0A096LP01 95 aa2.05□□□□□ -2.08
PPP4R1-227ENST00000583988 IGHV3-49A0A0A0MS15 119 aa2.05□□□□□ -2.08
PPP4R1-227ENST00000583988 LRRIQ4A6NIV6 560 aa2.05□□□□□ -2.08
PPP4R1-227ENST00000583988 ANKRD65E5RJM6 399 aa2.05□□□□□ -2.08
PPP4R1-227ENST00000583988 GATBO75879 557 aaKnown RBP2.05□□□□□ -2.08
PPP4R1-227ENST00000583988 IFNW1P05000 195 aa2.05□□□□□ -2.08
PPP4R1-227ENST00000583988 MYCNOSP40205 109 aa2.05□□□□□ -2.08
PPP4R1-227ENST00000583988 MAGEA1P43355 309 aa2.05□□□□□ -2.08
PPP4R1-227ENST00000583988 ERFP50548 548 aa2.05□□□□□ -2.08
PPP4R1-227ENST00000583988 AP1S2P56377 157 aa2.05□□□□□ -2.08
PPP4R1-227ENST00000583988 OR2B8PP59922 312 aa2.05□□□□□ -2.08
PPP4R1-227ENST00000583988 FUT5Q11128 374 aa2.05□□□□□ -2.08
PPP4R1-227ENST00000583988 SPINT4Q6UDR6 99 aa2.05□□□□□ -2.08
PPP4R1-227ENST00000583988 UNC93AQ86WB7 457 aa2.05□□□□□ -2.08
PPP4R1-227ENST00000583988 TMEM105Q8N8V8 129 aa2.05□□□□□ -2.08
PPP4R1-227ENST00000583988 OR1L1Q8NH94 360 aa2.05□□□□□ -2.08
PPP4R1-227ENST00000583988 KLF14Q8TD94 323 aaPredicted RBP2.05□□□□□ -2.08
PPP4R1-227ENST00000583988 RCN3Q96D15 328 aa2.05□□□□□ -2.08
PPP4R1-227ENST00000583988 SGTBQ96EQ0 304 aa2.05□□□□□ -2.08
PPP4R1-227ENST00000583988 IP6K3Q96PC2 410 aa2.05□□□□□ -2.08
PPP4R1-227ENST00000583988 TMEM243Q9BU79 118 aa2.05□□□□□ -2.08
PPP4R1-227ENST00000583988 TEKT3Q9BXF9 490 aa2.05□□□□□ -2.08
PPP4R1-227ENST00000583988 ZSCAN16Q9H4T2 348 aaPredicted RBP2.05□□□□□ -2.08
PPP4R1-227ENST00000583988 ZNF442Q9H7R0 627 aa2.05□□□□□ -2.08
PPP4R1-227ENST00000583988 LYRM4Q9HD34 91 aa2.05□□□□□ -2.08
PPP4R1-227ENST00000583988 FBXO6Q9NRD1 293 aaPredicted RBP2.05□□□□□ -2.08
PPP4R1-227ENST00000583988 RGS18Q9NS28 235 aa2.05□□□□□ -2.08
PPP4R1-227ENST00000583988 C21orf62Q9NYP8 219 aa2.05□□□□□ -2.08
PPP4R1-227ENST00000583988 HES2Q9Y543 173 aa2.05□□□□□ -2.08
PPP4R1-227ENST00000583988 SERTM2A0A1B0GWG4 89 aa2.04□□□□□ -2.08
PPP4R1-227ENST00000583988 TMEM120BA0PK00 339 aa2.04□□□□□ -2.08
PPP4R1-227ENST00000583988 NMT2O60551 498 aa2.04□□□□□ -2.08
PPP4R1-227ENST00000583988 SLC16A7O60669 478 aa2.04□□□□□ -2.08
PPP4R1-227ENST00000583988 UBCP0CG48 685 aaKnown RBP2.04□□□□□ -2.08
PPP4R1-227ENST00000583988 OR8G3PP0DMU2 310 aa2.04□□□□□ -2.08
PPP4R1-227ENST00000583988 RNASE2P10153 161 aaKnown RBP2.04□□□□□ -2.08
PPP4R1-227ENST00000583988 MPV17P39210 176 aa2.04□□□□□ -2.08
PPP4R1-227ENST00000583988 TAS2R46P59540 309 aa2.04□□□□□ -2.08
PPP4R1-227ENST00000583988 DNAJC3Q13217 504 aa2.04□□□□□ -2.08
PPP4R1-227ENST00000583988 NAB1Q13506 487 aa2.04□□□□□ -2.08
PPP4R1-227ENST00000583988 RBMY1FQ15415 496 aaKnown RBP2.04□□□□□ -2.08
PPP4R1-227ENST00000583988 HADHQ16836 314 aaKnown RBP2.04□□□□□ -2.08
PPP4R1-227ENST00000583988 SLC25A35Q3KQZ1 300 aa2.04□□□□□ -2.08
PPP4R1-227ENST00000583988 MFSD14CQ5VZR4 134 aa2.04□□□□□ -2.08
PPP4R1-227ENST00000583988 GPR179Q6PRD1 2367 aa2.04□□□□□ -2.08
PPP4R1-227ENST00000583988 ANGPTL8Q6UXH0 198 aa2.04□□□□□ -2.08
PPP4R1-227ENST00000583988 LRRC52Q8N7C0 313 aa2.04□□□□□ -2.08
PPP4R1-227ENST00000583988 OR5T1Q8NG75 326 aa2.04□□□□□ -2.08
PPP4R1-227ENST00000583988 OR52E5Q8NH55 327 aa2.04□□□□□ -2.08
PPP4R1-227ENST00000583988 ENKURQ8TC29 256 aa2.04□□□□□ -2.08
PPP4R1-227ENST00000583988 GLYATL2Q8WU03 294 aa2.04□□□□□ -2.08
PPP4R1-227ENST00000583988 RAB1CQ92928 201 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms