RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 POU4F2Q12837 409 aa9□□□□□ -0.97
CASC3-208ENST00000583649 CCDC92Q53HC0 331 aaPredicted RBP9□□□□□ -0.97
CASC3-208ENST00000583649 LRIF1Q5T3J3 769 aa9□□□□□ -0.97
CASC3-208ENST00000583649 DNM1P34Q6PK57 102 aa9□□□□□ -0.97
CASC3-208ENST00000583649 OAFQ86UD1 273 aa9□□□□□ -0.97
CASC3-208ENST00000583649 WIPF2Q8TF74 440 aaPredicted RBP9□□□□□ -0.97
CASC3-208ENST00000583649 TMEM255BQ8WV15 326 aa9□□□□□ -0.97
CASC3-208ENST00000583649 LRRC29Q8WV35 223 aa9□□□□□ -0.97
CASC3-208ENST00000583649 LZICQ8WZA0 190 aa9□□□□□ -0.97
CASC3-208ENST00000583649 FOXRED1Q96CU9 486 aaPredicted RBP9□□□□□ -0.97
CASC3-208ENST00000583649 BPIFA2Q96DR5 249 aa9□□□□□ -0.97
CASC3-208ENST00000583649 DUS3LQ96G46 650 aaKnown RBP9□□□□□ -0.97
CASC3-208ENST00000583649 AKR1E2Q96JD6 320 aa9□□□□□ -0.97
CASC3-208ENST00000583649 PRSS27Q9BQR3 290 aa9□□□□□ -0.97
CASC3-208ENST00000583649 ROPN1BQ9BZX4 212 aaPredicted RBP9□□□□□ -0.97
CASC3-208ENST00000583649 MUC13Q9H3R2 512 aa9□□□□□ -0.97
CASC3-208ENST00000583649 OPA3Q9H6K4 179 aa9□□□□□ -0.97
CASC3-208ENST00000583649 ROPN1Q9HAT0 212 aaPredicted RBP9□□□□□ -0.97
CASC3-208ENST00000583649 SLC25A10Q9UBX3 287 aaPredicted RBP9□□□□□ -0.97
CASC3-208ENST00000583649 GMEB1Q9Y692 573 aa9□□□□□ -0.97
CASC3-208ENST00000583649 PRSS37A4D1T9 235 aa8.99□□□□□ -0.97
CASC3-208ENST00000583649 ANKRD30BLA7E2S9 258 aa8.99□□□□□ -0.97
CASC3-208ENST00000583649 VGLL3A8MV65 326 aa8.99□□□□□ -0.97
CASC3-208ENST00000583649 SCG5P05408 212 aa8.99□□□□□ -0.97
CASC3-208ENST00000583649 CENPAP49450 140 aa8.99□□□□□ -0.97
CASC3-208ENST00000583649 TPTEP56180 551 aa8.99□□□□□ -0.97
CASC3-208ENST00000583649 PRSS12P56730 875 aa8.99□□□□□ -0.97
CASC3-208ENST00000583649 PCK2Q16822 640 aa8.99□□□□□ -0.97
CASC3-208ENST00000583649 RBM45Q8IUH3 476 aaKnown RBP8.99□□□□□ -0.97
CASC3-208ENST00000583649 FAM216BQ8N7L0 139 aa8.99□□□□□ -0.97
CASC3-208ENST00000583649 OR2AJ1Q8NGZ0 328 aa8.99□□□□□ -0.97
CASC3-208ENST00000583649 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.99□□□□□ -0.97
CASC3-208ENST00000583649 PITX2Q99697 317 aa8.99□□□□□ -0.97
CASC3-208ENST00000583649 C20orf27Q9GZN8 174 aa8.99□□□□□ -0.97
CASC3-208ENST00000583649 LGALS13Q9UHV8 139 aa8.99□□□□□ -0.97
CASC3-208ENST00000583649 RIMS3Q9UJD0 308 aa8.99□□□□□ -0.97
CASC3-208ENST00000583649 RPS6KA6Q9UK32 745 aa8.99□□□□□ -0.97
CASC3-208ENST00000583649 NDUFAF1Q9Y375 327 aa8.99□□□□□ -0.97
CASC3-208ENST00000583649 H7C1C5 153 aa8.98□□□□□ -0.97
CASC3-208ENST00000583649 TYROBPO43914 113 aa8.98□□□□□ -0.97
CASC3-208ENST00000583649 SLC16A7O60669 478 aa8.98□□□□□ -0.97
CASC3-208ENST00000583649 IFI30P13284 250 aa8.98□□□□□ -0.97
CASC3-208ENST00000583649 AZGP1P25311 298 aaKnown RBP8.98□□□□□ -0.97
CASC3-208ENST00000583649 CHATP28329 748 aa8.98□□□□□ -0.97
CASC3-208ENST00000583649 SLC6A1P30531 599 aa8.98□□□□□ -0.97
CASC3-208ENST00000583649 SLC9A3P48764 834 aa8.98□□□□□ -0.97
CASC3-208ENST00000583649 DLX1P56177 255 aa8.98□□□□□ -0.97
CASC3-208ENST00000583649 CAV3P56539 151 aa8.98□□□□□ -0.97
CASC3-208ENST00000583649 LCN6P62502 163 aa8.98□□□□□ -0.97
CASC3-208ENST00000583649 ST3GAL3Q11203 375 aa8.98□□□□□ -0.97
CASC3-208ENST00000583649 ATPAF1Q5TC12 328 aaPredicted RBP8.98□□□□□ -0.97
CASC3-208ENST00000583649 ZNF826PQ6ZT77 177 aa8.98□□□□□ -0.97
CASC3-208ENST00000583649 DPY19L4Q7Z388 723 aa8.98□□□□□ -0.97
CASC3-208ENST00000583649 NKAIN4Q8IVV8 208 aa8.98□□□□□ -0.97
CASC3-208ENST00000583649 LINC00482Q8N8I6 264 aa8.98□□□□□ -0.97
CASC3-208ENST00000583649 GPR32P1Q8NGA4 272 aa8.98□□□□□ -0.97
CASC3-208ENST00000583649 OR51A7Q8NH64 312 aa8.98□□□□□ -0.97
CASC3-208ENST00000583649 TFAP2CQ92754 450 aa8.98□□□□□ -0.97
CASC3-208ENST00000583649 MYDGFQ969H8 173 aa8.98□□□□□ -0.97
CASC3-208ENST00000583649 SPTSSAQ969W0 71 aa8.98□□□□□ -0.97
CASC3-208ENST00000583649 ZNF570Q96NI8 536 aa8.98□□□□□ -0.97
CASC3-208ENST00000583649 SLC25A37Q9NYZ2 338 aa8.98□□□□□ -0.97
CASC3-208ENST00000583649 BAG5Q9UL15 447 aa8.98□□□□□ -0.97
CASC3-208ENST00000583649 SH3GLB1Q9Y371 365 aa8.98□□□□□ -0.97
CASC3-208ENST00000583649 RYR2Q92736 4967 aa8.97□□□□□ -0.97
CASC3-208ENST00000583649 H0YHG0 523 aa8.97□□□□□ -0.97
CASC3-208ENST00000583649 ACOT8O14734 319 aa8.97□□□□□ -0.97
CASC3-208ENST00000583649 JTBO76095 146 aa8.97□□□□□ -0.97
CASC3-208ENST00000583649 IFNA14P01570 189 aa8.97□□□□□ -0.97
CASC3-208ENST00000583649 CCDC159P0C7I6 412 aa8.97□□□□□ -0.97
CASC3-208ENST00000583649 ACSM4P0C7M7 580 aa8.97□□□□□ -0.97
CASC3-208ENST00000583649 KITP10721 976 aa8.97□□□□□ -0.97
CASC3-208ENST00000583649 CTLA4P16410 223 aa8.97□□□□□ -0.97
CASC3-208ENST00000583649 CRABP1P29762 137 aa8.97□□□□□ -0.97
CASC3-208ENST00000583649 SDHAP31040 664 aa8.97□□□□□ -0.97
CASC3-208ENST00000583649 DDOSTP39656 456 aa8.97□□□□□ -0.97
CASC3-208ENST00000583649 TGM4P49221 684 aa8.97□□□□□ -0.97
CASC3-208ENST00000583649 HOXA4Q00056 320 aaPredicted RBP8.97□□□□□ -0.97
CASC3-208ENST00000583649 OR9I1Q8NGQ6 314 aa8.97□□□□□ -0.97
CASC3-208ENST00000583649 C17orf50Q8WW18 174 aa8.97□□□□□ -0.97
CASC3-208ENST00000583649 MALSU1Q96EH3 234 aa8.97□□□□□ -0.97
CASC3-208ENST00000583649 C16orf45Q96MC5 204 aaPredicted RBP8.97□□□□□ -0.97
CASC3-208ENST00000583649 ASCL2Q99929 193 aa8.97□□□□□ -0.97
CASC3-208ENST00000583649 ATF6BQ99941 703 aa8.97□□□□□ -0.97
CASC3-208ENST00000583649 ZNF649Q9BS31 505 aa8.97□□□□□ -0.97
CASC3-208ENST00000583649 ZMAT4Q9H898 229 aa8.97□□□□□ -0.97
CASC3-208ENST00000583649 THAP1Q9NVV9 213 aa8.97□□□□□ -0.97
CASC3-208ENST00000583649 HAO2Q9NYQ3 351 aa8.97□□□□□ -0.97
CASC3-208ENST00000583649 VAPAQ9P0L0 249 aa8.97□□□□□ -0.97
CASC3-208ENST00000583649 COA3Q9Y2R0 106 aaPredicted RBP8.97□□□□□ -0.97
CASC3-208ENST00000583649 LRP12Q9Y561 859 aa8.97□□□□□ -0.97
CASC3-208ENST00000583649 TENM2Q9NT68 2774 aa8.97□□□□□ -0.97
CASC3-208ENST00000583649 A6NDX4 124 aa8.96□□□□□ -0.98
CASC3-208ENST00000583649 EFCAB9A8MZ26 197 aa8.96□□□□□ -0.98
CASC3-208ENST00000583649 FCN3O75636 299 aa8.96□□□□□ -0.98
CASC3-208ENST00000583649 CD14P08571 375 aa8.96□□□□□ -0.98
CASC3-208ENST00000583649 HOXB9P17482 250 aaPredicted RBP8.96□□□□□ -0.98
CASC3-208ENST00000583649 GNALP38405 381 aa8.96□□□□□ -0.98
CASC3-208ENST00000583649 SLC7A2P52569 658 aa8.96□□□□□ -0.98
CASC3-208ENST00000583649 OR12D2P58182 307 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms