RNA–Protein interactions for RNA: ENST00000582303.1

CDC42EP4-208, Transcript of CDC42 effector protein 4, humanhuman

TSL 5

Gene CDC42EP4, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-208ENST00000582303 MMP9P14780 707 aa12.07□□□□□ -0.48
CDC42EP4-208ENST00000582303 H2AFXP16104 143 aaPredicted RBP12.07□□□□□ -0.48
CDC42EP4-208ENST00000582303 PSME3P61289 254 aa12.07□□□□□ -0.48
CDC42EP4-208ENST00000582303 SPIBQ01892 262 aa12.07□□□□□ -0.48
CDC42EP4-208ENST00000582303 TAF13Q15543 124 aa12.07□□□□□ -0.48
CDC42EP4-208ENST00000582303 MICBQ29980 383 aa12.07□□□□□ -0.48
CDC42EP4-208ENST00000582303 RUSC1-AS1Q66K80 236 aa12.07□□□□□ -0.48
CDC42EP4-208ENST00000582303 LDLRAD3Q86YD5 345 aa12.07□□□□□ -0.48
CDC42EP4-208ENST00000582303 CMTM4Q8IZR5 234 aa12.07□□□□□ -0.48
CDC42EP4-208ENST00000582303 C19orf18Q8NEA5 215 aa12.07□□□□□ -0.48
CDC42EP4-208ENST00000582303 PROKR2Q8NFJ6 384 aa12.07□□□□□ -0.48
CDC42EP4-208ENST00000582303 OR8S1Q8NH09 359 aa12.07□□□□□ -0.48
CDC42EP4-208ENST00000582303 PYURFQ96I23 114 aa12.07□□□□□ -0.48
CDC42EP4-208ENST00000582303 TBX15Q96SF7 602 aa12.07□□□□□ -0.48
CDC42EP4-208ENST00000582303 COPS4Q9BT78 406 aa12.07□□□□□ -0.48
CDC42EP4-208ENST00000582303 GORASP2Q9H8Y8 452 aa12.07□□□□□ -0.48
CDC42EP4-208ENST00000582303 PNRC2Q9NPJ4 139 aaKnown RBP12.07□□□□□ -0.48
CDC42EP4-208ENST00000582303 C1orf123Q9NWV4 160 aa12.07□□□□□ -0.48
CDC42EP4-208ENST00000582303 PDP1Q9P0J1 537 aaPredicted RBP12.07□□□□□ -0.48
CDC42EP4-208ENST00000582303 KAAG1Q9UBP8 84 aa12.07□□□□□ -0.48
CDC42EP4-208ENST00000582303 KPTNQ9Y664 436 aa12.07□□□□□ -0.48
CDC42EP4-208ENST00000582303 NOTCH1P46531 2555 aa12.07□□□□□ -0.48
CDC42EP4-208ENST00000582303 OR6C68A6NDL8 312 aa12.06□□□□□ -0.48
CDC42EP4-208ENST00000582303 TIPRLO75663 272 aa12.06□□□□□ -0.48
CDC42EP4-208ENST00000582303 APOC1P02654 83 aa12.06□□□□□ -0.48
CDC42EP4-208ENST00000582303 GRPP07492 148 aa12.06□□□□□ -0.48
CDC42EP4-208ENST00000582303 MUC1P15941 1255 aaPredicted RBP12.06□□□□□ -0.48
CDC42EP4-208ENST00000582303 OTX1P32242 354 aaPredicted RBP12.06□□□□□ -0.48
CDC42EP4-208ENST00000582303 SLC15A1P46059 708 aa12.06□□□□□ -0.48
CDC42EP4-208ENST00000582303 PRSS12P56730 875 aa12.06□□□□□ -0.48
CDC42EP4-208ENST00000582303 ZNF92Q03936 586 aa12.06□□□□□ -0.48
CDC42EP4-208ENST00000582303 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.06□□□□□ -0.48
CDC42EP4-208ENST00000582303 TSPAN31Q12999 210 aa12.06□□□□□ -0.48
CDC42EP4-208ENST00000582303 SNCBQ16143 134 aa12.06□□□□□ -0.48
CDC42EP4-208ENST00000582303 TAF9Q16594 264 aa12.06□□□□□ -0.48
CDC42EP4-208ENST00000582303 CDONQ4KMG0 1287 aa12.06□□□□□ -0.48
CDC42EP4-208ENST00000582303 HSP90B2PQ58FF3 399 aa12.06□□□□□ -0.48
CDC42EP4-208ENST00000582303 BTN2A1Q7KYR7 527 aa12.06□□□□□ -0.48
CDC42EP4-208ENST00000582303 SLC36A1Q7Z2H8 476 aa12.06□□□□□ -0.48
CDC42EP4-208ENST00000582303 NAA40Q86UY6 237 aa12.06□□□□□ -0.48
CDC42EP4-208ENST00000582303 FTMTQ8N4E7 242 aa12.06□□□□□ -0.48
CDC42EP4-208ENST00000582303 LINC00471Q8N535 108 aa12.06□□□□□ -0.48
CDC42EP4-208ENST00000582303 SDR9C7Q8NEX9 313 aa12.06□□□□□ -0.48
CDC42EP4-208ENST00000582303 GNPDA2Q8TDQ7 276 aa12.06□□□□□ -0.48
CDC42EP4-208ENST00000582303 TAF15Q92804 592 aaKnown RBP eCLIP12.06□□□□□ -0.48
CDC42EP4-208ENST00000582303 LHX4Q969G2 390 aa12.06□□□□□ -0.48
CDC42EP4-208ENST00000582303 MAP6Q96JE9 813 aa12.06□□□□□ -0.48
CDC42EP4-208ENST00000582303 FUZQ9BT04 418 aa12.06□□□□□ -0.48
CDC42EP4-208ENST00000582303 CNTD2Q9H8S5 307 aa12.06□□□□□ -0.48
CDC42EP4-208ENST00000582303 RNPEPL1Q9HAU8 725 aa12.06□□□□□ -0.48
CDC42EP4-208ENST00000582303 ADA2Q9NZK5 511 aa12.06□□□□□ -0.48
CDC42EP4-208ENST00000582303 CTSZQ9UBR2 303 aa12.06□□□□□ -0.48
CDC42EP4-208ENST00000582303 CD300AQ9UGN4 299 aa12.06□□□□□ -0.48
CDC42EP4-208ENST00000582303 MAGEL2Q9UJ55 1249 aa12.06□□□□□ -0.48
CDC42EP4-208ENST00000582303 DVL1O14640 695 aa12.05□□□□□ -0.48
CDC42EP4-208ENST00000582303 GPR137BO60478 399 aa12.05□□□□□ -0.48
CDC42EP4-208ENST00000582303 KRT36O76013 467 aa12.05□□□□□ -0.48
CDC42EP4-208ENST00000582303 CLPXO76031 633 aa12.05□□□□□ -0.48
CDC42EP4-208ENST00000582303 DIRAS1O95057 198 aa12.05□□□□□ -0.48
CDC42EP4-208ENST00000582303 GYPAP02724 150 aa12.05□□□□□ -0.48
CDC42EP4-208ENST00000582303 FABP3P05413 133 aa12.05□□□□□ -0.48
CDC42EP4-208ENST00000582303 FBP1P09467 338 aa12.05□□□□□ -0.48
CDC42EP4-208ENST00000582303 CFL1P23528 166 aaKnown RBP12.05□□□□□ -0.48
CDC42EP4-208ENST00000582303 EEF1B2P24534 225 aaKnown RBP12.05□□□□□ -0.48
CDC42EP4-208ENST00000582303 NAA10P41227 235 aaPredicted RBP12.05□□□□□ -0.48
CDC42EP4-208ENST00000582303 IER3P46695 156 aa12.05□□□□□ -0.48
CDC42EP4-208ENST00000582303 BLVRAP53004 296 aa12.05□□□□□ -0.48
CDC42EP4-208ENST00000582303 ARF6P62330 175 aa12.05□□□□□ -0.48
CDC42EP4-208ENST00000582303 RELBQ01201 579 aa12.05□□□□□ -0.48
CDC42EP4-208ENST00000582303 GUCA2AQ02747 115 aa12.05□□□□□ -0.48
CDC42EP4-208ENST00000582303 SNAI3Q3KNW1 292 aa12.05□□□□□ -0.48
CDC42EP4-208ENST00000582303 TEX36Q5VZQ5 186 aa12.05□□□□□ -0.48
CDC42EP4-208ENST00000582303 FAM86B1Q8N7N1 296 aa12.05□□□□□ -0.48
CDC42EP4-208ENST00000582303 C12orf43Q96C57 262 aaKnown RBP12.05□□□□□ -0.48
CDC42EP4-208ENST00000582303 KCNJ15Q99712 375 aa12.05□□□□□ -0.48
CDC42EP4-208ENST00000582303 SIRPDQ9H106 197 aa12.05□□□□□ -0.48
CDC42EP4-208ENST00000582303 TCF7L1Q9HCS4 588 aa12.05□□□□□ -0.48
CDC42EP4-208ENST00000582303 MRPL22Q9NWU5 206 aaKnown RBP12.05□□□□□ -0.48
CDC42EP4-208ENST00000582303 RPUSD1Q9UJJ7 312 aaKnown RBP12.05□□□□□ -0.48
CDC42EP4-208ENST00000582303 SASH3O75995 380 aa12.04□□□□□ -0.48
CDC42EP4-208ENST00000582303 PRDX6P30041 224 aa12.04□□□□□ -0.48
CDC42EP4-208ENST00000582303 FMO3P31513 532 aa12.04□□□□□ -0.48
CDC42EP4-208ENST00000582303 GSSP48637 474 aa12.04□□□□□ -0.48
CDC42EP4-208ENST00000582303 GRB2P62993 217 aaKnown RBP12.04□□□□□ -0.48
CDC42EP4-208ENST00000582303 GLYATL3Q5SZD4 288 aa12.04□□□□□ -0.48
CDC42EP4-208ENST00000582303 SLC35F1Q5T1Q4 408 aa12.04□□□□□ -0.48
CDC42EP4-208ENST00000582303 METAP1DQ6UB28 335 aaPredicted RBP12.04□□□□□ -0.48
CDC42EP4-208ENST00000582303 DCXRQ7Z4W1 244 aa12.04□□□□□ -0.48
CDC42EP4-208ENST00000582303 GCSAMQ8N6F7 178 aa12.04□□□□□ -0.48
CDC42EP4-208ENST00000582303 OR56B2PQ8NGI1 322 aa12.04□□□□□ -0.48
CDC42EP4-208ENST00000582303 OR2AE1Q8NHA4 323 aa12.04□□□□□ -0.48
CDC42EP4-208ENST00000582303 LINC01006Q8NI28 216 aa12.04□□□□□ -0.48
CDC42EP4-208ENST00000582303 ST8SIA4Q92187 359 aa12.04□□□□□ -0.48
CDC42EP4-208ENST00000582303 RBM4BQ9BQ04 359 aaKnown RBP12.04□□□□□ -0.48
CDC42EP4-208ENST00000582303 SMURF1Q9HCE7 757 aa12.04□□□□□ -0.48
CDC42EP4-208ENST00000582303 CDH10Q9Y6N8 788 aa12.04□□□□□ -0.48
CDC42EP4-208ENST00000582303 DOCK11Q5JSL3 2073 aa12.03□□□□□ -0.48
CDC42EP4-208ENST00000582303 ZNF878C9JN71 531 aa12.03□□□□□ -0.48
CDC42EP4-208ENST00000582303 LHBP01229 141 aa12.03□□□□□ -0.48
CDC42EP4-208ENST00000582303 IGHV4-59P01825 116 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms