RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 PPIHO43447 177 aaKnown RBP10.66□□□□□ -0.7
SNORD55-201ENST00000581525 CDC14BO60729 498 aa10.66□□□□□ -0.7
SNORD55-201ENST00000581525 CRLF1O75462 422 aa10.66□□□□□ -0.7
SNORD55-201ENST00000581525 SLC2A1P11166 492 aa10.66□□□□□ -0.7
SNORD55-201ENST00000581525 CPT2P23786 658 aa10.66□□□□□ -0.7
SNORD55-201ENST00000581525 IL2RGP31785 369 aa10.66□□□□□ -0.7
SNORD55-201ENST00000581525 SRP9P49458 86 aaKnown RBP10.66□□□□□ -0.7
SNORD55-201ENST00000581525 PSMA6P60900 246 aaKnown RBP10.66□□□□□ -0.7
SNORD55-201ENST00000581525 OR8B8Q15620 311 aa10.66□□□□□ -0.7
SNORD55-201ENST00000581525 ZSCAN26Q16670 478 aa10.66□□□□□ -0.7
SNORD55-201ENST00000581525 MEDAGQ5VYS4 303 aa10.66□□□□□ -0.7
SNORD55-201ENST00000581525 LRRN1Q6UXK5 716 aa10.66□□□□□ -0.7
SNORD55-201ENST00000581525 Q71RC1 249 aaPredicted RBP10.66□□□□□ -0.7
SNORD55-201ENST00000581525 MRPL21Q7Z2W9 205 aaKnown RBP10.66□□□□□ -0.7
SNORD55-201ENST00000581525 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.66□□□□□ -0.7
SNORD55-201ENST00000581525 EGFL6Q8IUX8 553 aa10.66□□□□□ -0.7
SNORD55-201ENST00000581525 SPERTQ8NA61 448 aa10.66□□□□□ -0.7
SNORD55-201ENST00000581525 OR2AE1Q8NHA4 323 aa10.66□□□□□ -0.7
SNORD55-201ENST00000581525 RHOXF1Q8NHV9 184 aa10.66□□□□□ -0.7
SNORD55-201ENST00000581525 Q8TCH9 128 aa10.66□□□□□ -0.7
SNORD55-201ENST00000581525 CCL17Q92583 94 aa10.66□□□□□ -0.7
SNORD55-201ENST00000581525 RAB1CQ92928 201 aa10.66□□□□□ -0.7
SNORD55-201ENST00000581525 RFKQ969G6 155 aa10.66□□□□□ -0.7
SNORD55-201ENST00000581525 UBE2FQ969M7 185 aa10.66□□□□□ -0.7
SNORD55-201ENST00000581525 OR10A2Q9H208 303 aa10.66□□□□□ -0.7
SNORD55-201ENST00000581525 C8orf4Q9NR00 106 aa10.66□□□□□ -0.7
SNORD55-201ENST00000581525 TMEM106BQ9NUM4 274 aa10.66□□□□□ -0.7
SNORD55-201ENST00000581525 C2CD3Q4AC94 2353 aa10.65□□□□□ -0.7
SNORD55-201ENST00000581525 LRP5LA4QPB2 252 aa10.65□□□□□ -0.7
SNORD55-201ENST00000581525 A8MV72 311 aaPredicted RBP10.65□□□□□ -0.7
SNORD55-201ENST00000581525 TMEM178BH3BS89 294 aa10.65□□□□□ -0.7
SNORD55-201ENST00000581525 IGHV2-70P01814 119 aa10.65□□□□□ -0.7
SNORD55-201ENST00000581525 OR2T7P0C7T2 308 aa10.65□□□□□ -0.7
SNORD55-201ENST00000581525 PMELP40967 661 aa10.65□□□□□ -0.7
SNORD55-201ENST00000581525 CDH15P55291 814 aa10.65□□□□□ -0.7
SNORD55-201ENST00000581525 EGR3Q06889 387 aa10.65□□□□□ -0.7
SNORD55-201ENST00000581525 FAM57BQ71RH2 274 aa10.65□□□□□ -0.7
SNORD55-201ENST00000581525 SPATC1Q76KD6 591 aa10.65□□□□□ -0.7
SNORD55-201ENST00000581525 KRT77Q7Z794 578 aa10.65□□□□□ -0.7
SNORD55-201ENST00000581525 LRRC28Q86X40 367 aaPredicted RBP10.65□□□□□ -0.7
SNORD55-201ENST00000581525 SLC35F2Q8IXU6 374 aa10.65□□□□□ -0.7
SNORD55-201ENST00000581525 OR2T27Q8NH04 317 aa10.65□□□□□ -0.7
SNORD55-201ENST00000581525 SPRYD4Q8WW59 207 aaPredicted RBP10.65□□□□□ -0.7
SNORD55-201ENST00000581525 POM121Q96HA1 1249 aa10.65□□□□□ -0.7
SNORD55-201ENST00000581525 REEP6Q96HR9 211 aa10.65□□□□□ -0.7
SNORD55-201ENST00000581525 LYZL4Q96KX0 146 aa10.65□□□□□ -0.7
SNORD55-201ENST00000581525 MROQ9BYG7 248 aa10.65□□□□□ -0.7
SNORD55-201ENST00000581525 MRPS18AQ9NVS2 196 aaKnown RBP10.65□□□□□ -0.7
SNORD55-201ENST00000581525 FAM118AQ9NWS6 357 aa10.65□□□□□ -0.7
SNORD55-201ENST00000581525 PPP1R3CQ9UQK1 317 aa10.65□□□□□ -0.7
SNORD55-201ENST00000581525 NPTNQ9Y639 398 aa10.65□□□□□ -0.7
SNORD55-201ENST00000581525 MXRA5Q9NR99 2828 aa10.64□□□□□ -0.71
SNORD55-201ENST00000581525 LOC100289279A0A1B0GTE1 492 aa10.64□□□□□ -0.71
SNORD55-201ENST00000581525 LOC100130705A0A1B0GUX0 176 aa10.64□□□□□ -0.71
SNORD55-201ENST00000581525 INAFM1C9JVW0 142 aa10.64□□□□□ -0.71
SNORD55-201ENST00000581525 CASQ2O14958 399 aaPredicted RBP10.64□□□□□ -0.71
SNORD55-201ENST00000581525 TPD52L2O43399 206 aaKnown RBP10.64□□□□□ -0.71
SNORD55-201ENST00000581525 IGHV2-5P01817 119 aa10.64□□□□□ -0.71
SNORD55-201ENST00000581525 ANXA2P07355 339 aaKnown RBP10.64□□□□□ -0.71
SNORD55-201ENST00000581525 MRPL3P09001 348 aaKnown RBP10.64□□□□□ -0.71
SNORD55-201ENST00000581525 ANPEPP15144 967 aa10.64□□□□□ -0.71
SNORD55-201ENST00000581525 ATP6V1B1P15313 513 aa10.64□□□□□ -0.71
SNORD55-201ENST00000581525 GSK3AP49840 483 aa10.64□□□□□ -0.71
SNORD55-201ENST00000581525 CXCR4P61073 352 aa10.64□□□□□ -0.71
SNORD55-201ENST00000581525 ISL1P61371 349 aa10.64□□□□□ -0.71
SNORD55-201ENST00000581525 SNCBQ16143 134 aa10.64□□□□□ -0.71
SNORD55-201ENST00000581525 ZIK1Q3SY52 487 aaPredicted RBP10.64□□□□□ -0.71
SNORD55-201ENST00000581525 TMEM155Q4W5P6 130 aa10.64□□□□□ -0.71
SNORD55-201ENST00000581525 FAM76BQ5HYJ3 339 aa10.64□□□□□ -0.71
SNORD55-201ENST00000581525 FAM166AQ6J272 317 aa10.64□□□□□ -0.71
SNORD55-201ENST00000581525 ZNF322Q6U7Q0 402 aaPredicted RBP10.64□□□□□ -0.71
SNORD55-201ENST00000581525 PACRGLQ8N7B6 248 aa10.64□□□□□ -0.71
SNORD55-201ENST00000581525 LINC01356Q8N9X3 169 aa10.64□□□□□ -0.71
SNORD55-201ENST00000581525 BHLHE23Q8NDY6 225 aa10.64□□□□□ -0.71
SNORD55-201ENST00000581525 OR10AD1Q8NGE0 317 aa10.64□□□□□ -0.71
SNORD55-201ENST00000581525 OR8B12Q8NGG6 310 aa10.64□□□□□ -0.71
SNORD55-201ENST00000581525 OR56B2PQ8NGI1 322 aa10.64□□□□□ -0.71
SNORD55-201ENST00000581525 FAM81AQ8TBF8 368 aa10.64□□□□□ -0.71
SNORD55-201ENST00000581525 STMN2Q93045 179 aa10.64□□□□□ -0.71
SNORD55-201ENST00000581525 TIMD4Q96H15 378 aa10.64□□□□□ -0.71
SNORD55-201ENST00000581525 NUFIP1Q9UHK0 495 aaKnown RBP10.64□□□□□ -0.71
SNORD55-201ENST00000581525 MRM2Q9UI43 246 aaKnown RBP10.64□□□□□ -0.71
SNORD55-201ENST00000581525 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.64□□□□□ -0.71
SNORD55-201ENST00000581525 EXOGQ9Y2C4 368 aaKnown RBP10.64□□□□□ -0.71
SNORD55-201ENST00000581525 POLR3KQ9Y2Y1 108 aaPredicted RBP10.64□□□□□ -0.71
SNORD55-201ENST00000581525 TANC2Q9HCD6 1990 aa10.64□□□□□ -0.71
SNORD55-201ENST00000581525 NAV3Q8IVL0 2385 aa10.63□□□□□ -0.71
SNORD55-201ENST00000581525 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.63□□□□□ -0.71
SNORD55-201ENST00000581525 TMEM269A0A1B0GVZ9 245 aa10.63□□□□□ -0.71
SNORD55-201ENST00000581525 GGT3PA6NGU5 568 aa10.63□□□□□ -0.71
SNORD55-201ENST00000581525 B4DSR2 109 aa10.63□□□□□ -0.71
SNORD55-201ENST00000581525 ZNF670-ZNF695F2Z2N8 137 aa10.63□□□□□ -0.71
SNORD55-201ENST00000581525 F5H5P2 479 aa10.63□□□□□ -0.71
SNORD55-201ENST00000581525 MPZL2O60487 215 aa10.63□□□□□ -0.71
SNORD55-201ENST00000581525 LMX1BO60663 402 aa10.63□□□□□ -0.71
SNORD55-201ENST00000581525 ENTPD6O75354 484 aa10.63□□□□□ -0.71
SNORD55-201ENST00000581525 SULT1C4O75897 302 aa10.63□□□□□ -0.71
SNORD55-201ENST00000581525 CST4P01036 141 aa10.63□□□□□ -0.71
SNORD55-201ENST00000581525 HLA-DPB1P04440 258 aa10.63□□□□□ -0.71
SNORD55-201ENST00000581525 CA6P23280 308 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms