RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 RIIAD1A6NNX1 92 aa12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 B2RBV5 119 aa12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 GPR37O15354 613 aa12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 FAM20BO75063 409 aa12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 ECDO95905 644 aaPredicted RBP12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 FAM107AO95990 144 aa12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 LHBP01229 141 aa12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 HLA-DPB1P04440 258 aa12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 RAP2AP10114 183 aa12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 ZNF3P17036 446 aa12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 PYCR1P32322 319 aa12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 RPL15P61313 204 aaKnown RBP12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 IL13RA1P78552 427 aa12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 CRMP1Q14194 572 aa12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 SNAI3Q3KNW1 292 aa12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 SHISA2Q6UWI4 295 aa12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 CYP2R1Q6VVX0 501 aa12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 SHFQ7M4L6 423 aa12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 KRT74Q7RTS7 529 aa12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 TMEM86BQ8N661 226 aa12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 SIGLECL1Q8N7X8 197 aa12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 CYB561A3Q8NBI2 242 aa12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 RNF133Q8WVZ7 376 aa12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 NUDT16L1Q9BRJ7 211 aaKnown RBP12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 COPS4Q9BT78 406 aa12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 ADAT1Q9BUB4 502 aaKnown RBP12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 MS4A7Q9GZW8 240 aaPredicted RBP12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 FN3KQ9H479 309 aa12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 WDR76Q9H967 626 aa12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 ABCB9Q9NP78 766 aa12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 NOX4Q9NPH5 578 aa12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 ZNF391Q9UJN7 358 aa12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 SAMHD1Q9Y3Z3 626 aaKnown RBP12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 MMP24Q9Y5R2 645 aa12.08□□□□□ -0.48
SMARCE1-216ENST00000580419 A0A1B0GUS0 222 aa12.07□□□□□ -0.48
SMARCE1-216ENST00000580419 GGT3PA6NGU5 568 aa12.07□□□□□ -0.48
SMARCE1-216ENST00000580419 DNAJC9-AS1A6NH13 148 aa12.07□□□□□ -0.48
SMARCE1-216ENST00000580419 ZNF593O00488 134 aaPredicted RBP12.07□□□□□ -0.48
SMARCE1-216ENST00000580419 CA6P23280 308 aa12.07□□□□□ -0.48
SMARCE1-216ENST00000580419 GRK5P34947 590 aa12.07□□□□□ -0.48
SMARCE1-216ENST00000580419 MPPED2Q15777 294 aa12.07□□□□□ -0.48
SMARCE1-216ENST00000580419 TEX36Q5VZQ5 186 aa12.07□□□□□ -0.48
SMARCE1-216ENST00000580419 PRSS45Q7RTY3 260 aa12.07□□□□□ -0.48
SMARCE1-216ENST00000580419 FTMTQ8N4E7 242 aa12.07□□□□□ -0.48
SMARCE1-216ENST00000580419 ZNF454Q8N9F8 522 aa12.07□□□□□ -0.48
SMARCE1-216ENST00000580419 ZNRF4Q8WWF5 429 aa12.07□□□□□ -0.48
SMARCE1-216ENST00000580419 C12orf43Q96C57 262 aaKnown RBP12.07□□□□□ -0.48
SMARCE1-216ENST00000580419 C1orf147Q96MC9 270 aaPredicted RBP12.07□□□□□ -0.48
SMARCE1-216ENST00000580419 CCT8L2Q96SF2 557 aa12.07□□□□□ -0.48
SMARCE1-216ENST00000580419 SLITRK2Q9H156 845 aa12.07□□□□□ -0.48
SMARCE1-216ENST00000580419 ZNF696Q9H7X3 374 aa12.07□□□□□ -0.48
SMARCE1-216ENST00000580419 ERVK-18Q9QC07 812 aa12.07□□□□□ -0.48
SMARCE1-216ENST00000580419 DHRS12A0PJE2 317 aa12.06□□□□□ -0.48
SMARCE1-216ENST00000580419 AQP12BA6NM10 295 aa12.06□□□□□ -0.48
SMARCE1-216ENST00000580419 P2RY10O00398 339 aa12.06□□□□□ -0.48
SMARCE1-216ENST00000580419 GLCEO94923 617 aa12.06□□□□□ -0.48
SMARCE1-216ENST00000580419 MUC1P15941 1255 aaPredicted RBP12.06□□□□□ -0.48
SMARCE1-216ENST00000580419 EGR1P18146 543 aa12.06□□□□□ -0.48
SMARCE1-216ENST00000580419 BAMBIQ13145 260 aa12.06□□□□□ -0.48
SMARCE1-216ENST00000580419 TAF13Q15543 124 aa12.06□□□□□ -0.48
SMARCE1-216ENST00000580419 PRR31Q5SQ13 230 aa12.06□□□□□ -0.48
SMARCE1-216ENST00000580419 GLYATL3Q5SZD4 288 aa12.06□□□□□ -0.48
SMARCE1-216ENST00000580419 AQP12AQ8IXF9 295 aa12.06□□□□□ -0.48
SMARCE1-216ENST00000580419 PNLDC1Q8NA58 520 aaKnown RBP12.06□□□□□ -0.48
SMARCE1-216ENST00000580419 CSNK2A3Q8NEV1 391 aa12.06□□□□□ -0.48
SMARCE1-216ENST00000580419 OR4Q3Q8NH05 313 aa12.06□□□□□ -0.48
SMARCE1-216ENST00000580419 ZNF48Q96MX3 618 aaPredicted RBP12.06□□□□□ -0.48
SMARCE1-216ENST00000580419 DNTTIP1Q9H147 329 aa12.06□□□□□ -0.48
SMARCE1-216ENST00000580419 TLNRD1Q9H1K6 362 aa12.06□□□□□ -0.48
SMARCE1-216ENST00000580419 NIPAL2Q9H841 368 aa12.06□□□□□ -0.48
SMARCE1-216ENST00000580419 KIF17Q9P2E2 1029 aa12.06□□□□□ -0.48
SMARCE1-216ENST00000580419 OOEPA6NGQ2 149 aa12.05□□□□□ -0.48
SMARCE1-216ENST00000580419 TVP23AA6NH52 213 aa12.05□□□□□ -0.48
SMARCE1-216ENST00000580419 ANKRD30BLA7E2S9 258 aa12.05□□□□□ -0.48
SMARCE1-216ENST00000580419 ZNF879B4DU55 563 aa12.05□□□□□ -0.48
SMARCE1-216ENST00000580419 ACOT8O14734 319 aa12.05□□□□□ -0.48
SMARCE1-216ENST00000580419 PRODHO43272 600 aa12.05□□□□□ -0.48
SMARCE1-216ENST00000580419 SPRY1O43609 319 aaPredicted RBP12.05□□□□□ -0.48
SMARCE1-216ENST00000580419 RGS9O75916 674 aaPredicted RBP12.05□□□□□ -0.48
SMARCE1-216ENST00000580419 SPARCP09486 303 aa12.05□□□□□ -0.48
SMARCE1-216ENST00000580419 IGHV4-38-2P0DP08 117 aa12.05□□□□□ -0.48
SMARCE1-216ENST00000580419 PAICSP22234 425 aaKnown RBP12.05□□□□□ -0.48
SMARCE1-216ENST00000580419 OPRL1P41146 370 aa12.05□□□□□ -0.48
SMARCE1-216ENST00000580419 FAM3AP98173 230 aa12.05□□□□□ -0.48
SMARCE1-216ENST00000580419 MS4A2Q01362 244 aa12.05□□□□□ -0.48
SMARCE1-216ENST00000580419 SLC9A3R2Q15599 337 aa12.05□□□□□ -0.48
SMARCE1-216ENST00000580419 OR8B8Q15620 311 aa12.05□□□□□ -0.48
SMARCE1-216ENST00000580419 OCLNQ16625 522 aa12.05□□□□□ -0.48
SMARCE1-216ENST00000580419 GPR157Q5UAW9 335 aa12.05□□□□□ -0.48
SMARCE1-216ENST00000580419 TIGD4Q8IY51 512 aa12.05□□□□□ -0.48
SMARCE1-216ENST00000580419 ZNF511Q8NB15 262 aa12.05□□□□□ -0.48
SMARCE1-216ENST00000580419 OR10G2Q8NGC3 310 aa12.05□□□□□ -0.48
SMARCE1-216ENST00000580419 OR56B2PQ8NGI1 322 aa12.05□□□□□ -0.48
SMARCE1-216ENST00000580419 OR9Q1Q8NGQ5 310 aa12.05□□□□□ -0.48
SMARCE1-216ENST00000580419 OR2AE1Q8NHA4 323 aa12.05□□□□□ -0.48
SMARCE1-216ENST00000580419 TEX47Q8TBZ9 253 aa12.05□□□□□ -0.48
SMARCE1-216ENST00000580419 GIPC3Q8TF64 312 aa12.05□□□□□ -0.48
SMARCE1-216ENST00000580419 DNAJC9Q8WXX5 260 aa12.05□□□□□ -0.48
SMARCE1-216ENST00000580419 C22orf15Q8WYQ4 148 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms