RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.9□□□□□ -0.18
IFT20-210ENST00000580357 CR1P17927 2039 aa13.9□□□□□ -0.18
IFT20-210ENST00000580357 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.89□□□□□ -0.19
IFT20-210ENST00000580357 LOC100289279A0A1B0GTE1 492 aa13.89□□□□□ -0.19
IFT20-210ENST00000580357 LRP5LA4QPB2 252 aa13.89□□□□□ -0.19
IFT20-210ENST00000580357 ANKRD30BLA7E2S9 258 aa13.89□□□□□ -0.19
IFT20-210ENST00000580357 E9PQ18 207 aa13.89□□□□□ -0.19
IFT20-210ENST00000580357 MRPL3P09001 348 aaKnown RBP13.89□□□□□ -0.19
IFT20-210ENST00000580357 EGR3Q06889 387 aa13.89□□□□□ -0.19
IFT20-210ENST00000580357 TRIP10Q15642 601 aa13.89□□□□□ -0.19
IFT20-210ENST00000580357 OCLNQ16625 522 aa13.89□□□□□ -0.19
IFT20-210ENST00000580357 ZNF181Q2M3W8 571 aa13.89□□□□□ -0.19
IFT20-210ENST00000580357 C6orf52Q5T4I8 152 aa13.89□□□□□ -0.19
IFT20-210ENST00000580357 C1orf87Q8N0U7 546 aa13.89□□□□□ -0.19
IFT20-210ENST00000580357 LINC01356Q8N9X3 169 aa13.89□□□□□ -0.19
IFT20-210ENST00000580357 CSNK2A3Q8NEV1 391 aa13.89□□□□□ -0.19
IFT20-210ENST00000580357 OR2AE1Q8NHA4 323 aa13.89□□□□□ -0.19
IFT20-210ENST00000580357 CLDND2Q8NHS1 167 aa13.89□□□□□ -0.19
IFT20-210ENST00000580357 RAB39BQ96DA2 213 aa13.89□□□□□ -0.19
IFT20-210ENST00000580357 REEP6Q96HR9 211 aa13.89□□□□□ -0.19
IFT20-210ENST00000580357 MEGF10Q96KG7 1140 aa13.89□□□□□ -0.19
IFT20-210ENST00000580357 OR8B4Q96RC9 309 aa13.89□□□□□ -0.19
IFT20-210ENST00000580357 MYCBPQ99417 103 aaPredicted RBP13.89□□□□□ -0.19
IFT20-210ENST00000580357 SLC29A1Q99808 456 aa13.89□□□□□ -0.19
IFT20-210ENST00000580357 ADGRL4Q9HBW9 690 aa13.89□□□□□ -0.19
IFT20-210ENST00000580357 BRD7Q9NPI1 651 aa13.89□□□□□ -0.19
IFT20-210ENST00000580357 WIPI2Q9Y4P8 454 aa13.89□□□□□ -0.19
IFT20-210ENST00000580357 LRP12Q9Y561 859 aa13.89□□□□□ -0.19
IFT20-210ENST00000580357 PCDHGB1Q9Y5G3 927 aa13.89□□□□□ -0.19
IFT20-210ENST00000580357 GMPPBQ9Y5P6 360 aa13.89□□□□□ -0.19
IFT20-210ENST00000580357 TMEM269A0A1B0GVZ9 245 aa13.88□□□□□ -0.19
IFT20-210ENST00000580357 LRRC30A6NM36 301 aa13.88□□□□□ -0.19
IFT20-210ENST00000580357 B4DSR2 109 aa13.88□□□□□ -0.19
IFT20-210ENST00000580357 M0R129 80 aa13.88□□□□□ -0.19
IFT20-210ENST00000580357 TGFAP01135 160 aa13.88□□□□□ -0.19
IFT20-210ENST00000580357 CPT2P23786 658 aa13.88□□□□□ -0.19
IFT20-210ENST00000580357 CD200P41217 278 aa13.88□□□□□ -0.19
IFT20-210ENST00000580357 GATA4P43694 442 aa13.88□□□□□ -0.19
IFT20-210ENST00000580357 MMP16P51512 607 aa13.88□□□□□ -0.19
IFT20-210ENST00000580357 PSMA6P60900 246 aaKnown RBP13.88□□□□□ -0.19
IFT20-210ENST00000580357 CXCR4P61073 352 aa13.88□□□□□ -0.19
IFT20-210ENST00000580357 FAM3AP98173 230 aa13.88□□□□□ -0.19
IFT20-210ENST00000580357 MVKQ03426 396 aa13.88□□□□□ -0.19
IFT20-210ENST00000580357 ZNF829Q3KNS6 432 aaPredicted RBP13.88□□□□□ -0.19
IFT20-210ENST00000580357 ZNF322Q6U7Q0 402 aaPredicted RBP13.88□□□□□ -0.19
IFT20-210ENST00000580357 OR51G2Q8NGK0 314 aa13.88□□□□□ -0.19
IFT20-210ENST00000580357 MSI2Q96DH6 328 aaKnown RBP13.88□□□□□ -0.19
IFT20-210ENST00000580357 Q96MT0 163 aa13.88□□□□□ -0.19
IFT20-210ENST00000580357 GCM1Q9NP62 436 aa13.88□□□□□ -0.19
IFT20-210ENST00000580357 ABCB9Q9NP78 766 aa13.88□□□□□ -0.19
IFT20-210ENST00000580357 C14orf119Q9NWQ9 140 aa13.88□□□□□ -0.19
IFT20-210ENST00000580357 IKZF2Q9UKS7 526 aa13.88□□□□□ -0.19
IFT20-210ENST00000580357 KCNS2Q9ULS6 477 aa13.88□□□□□ -0.19
IFT20-210ENST00000580357 KLHDC2Q9Y2U9 406 aa13.88□□□□□ -0.19
IFT20-210ENST00000580357 NPTNQ9Y639 398 aa13.88□□□□□ -0.19
IFT20-210ENST00000580357 CSPG4Q6UVK1 2322 aa13.87□□□□□ -0.19
IFT20-210ENST00000580357 YLPM1P49750 1951 aaKnown RBP13.87□□□□□ -0.19
IFT20-210ENST00000580357 ABCA1O95477 2261 aa13.87□□□□□ -0.19
IFT20-210ENST00000580357 A0A0U1RQV5 110 aa13.87□□□□□ -0.19
IFT20-210ENST00000580357 LOC100130705A0A1B0GUX0 176 aa13.87□□□□□ -0.19
IFT20-210ENST00000580357 F5H5P2 479 aa13.87□□□□□ -0.19
IFT20-210ENST00000580357 H0YL77 283 aa13.87□□□□□ -0.19
IFT20-210ENST00000580357 MLNRO43193 412 aa13.87□□□□□ -0.19
IFT20-210ENST00000580357 LMX1BO60663 402 aa13.87□□□□□ -0.19
IFT20-210ENST00000580357 FSTL3O95633 263 aa13.87□□□□□ -0.19
IFT20-210ENST00000580357 ATP6V1B1P15313 513 aa13.87□□□□□ -0.19
IFT20-210ENST00000580357 PCMT1P22061 227 aa13.87□□□□□ -0.19
IFT20-210ENST00000580357 CA6P23280 308 aa13.87□□□□□ -0.19
IFT20-210ENST00000580357 GSK3AP49840 483 aa13.87□□□□□ -0.19
IFT20-210ENST00000580357 LMO4P61968 165 aa13.87□□□□□ -0.19
IFT20-210ENST00000580357 PACRGLQ8N7B6 248 aa13.87□□□□□ -0.19
IFT20-210ENST00000580357 ZNF555Q8NEP9 628 aa13.87□□□□□ -0.19
IFT20-210ENST00000580357 OR10AD1Q8NGE0 317 aa13.87□□□□□ -0.19
IFT20-210ENST00000580357 FAM118AQ9NWS6 357 aa13.87□□□□□ -0.19
IFT20-210ENST00000580357 TREM2Q9NZC2 230 aa13.87□□□□□ -0.19
IFT20-210ENST00000580357 COPS3Q9UNS2 423 aa13.87□□□□□ -0.19
IFT20-210ENST00000580357 CACNG2Q9Y698 323 aa13.87□□□□□ -0.19
IFT20-210ENST00000580357 HIVEP2P31629 2446 aa13.87□□□□□ -0.19
IFT20-210ENST00000580357 hCG_38984A0A1B0GV85 526 aa13.86□□□□□ -0.19
IFT20-210ENST00000580357 C5orf63A6NC05 138 aa13.86□□□□□ -0.19
IFT20-210ENST00000580357 INAFM1C9JVW0 142 aa13.86□□□□□ -0.19
IFT20-210ENST00000580357 TMEM178BH3BS89 294 aa13.86□□□□□ -0.19
IFT20-210ENST00000580357 SLC16A6O15403 523 aa13.86□□□□□ -0.19
IFT20-210ENST00000580357 CRLF1O75462 422 aa13.86□□□□□ -0.19
IFT20-210ENST00000580357 HLA-DPB1P04440 258 aa13.86□□□□□ -0.19
IFT20-210ENST00000580357 IRF2P14316 349 aa13.86□□□□□ -0.19
IFT20-210ENST00000580357 GNALP38405 381 aa13.86□□□□□ -0.19
IFT20-210ENST00000580357 MTNR1AP48039 350 aa13.86□□□□□ -0.19
IFT20-210ENST00000580357 CDH15P55291 814 aa13.86□□□□□ -0.19
IFT20-210ENST00000580357 TMEM155Q4W5P6 130 aa13.86□□□□□ -0.19
IFT20-210ENST00000580357 SPRNQ5BIV9 151 aa13.86□□□□□ -0.19
IFT20-210ENST00000580357 KCTD20Q7Z5Y7 419 aa13.86□□□□□ -0.19
IFT20-210ENST00000580357 LRRC28Q86X40 367 aaPredicted RBP13.86□□□□□ -0.19
IFT20-210ENST00000580357 OR56B2PQ8NGI1 322 aa13.86□□□□□ -0.19
IFT20-210ENST00000580357 OR11L1Q8NGX0 322 aa13.86□□□□□ -0.19
IFT20-210ENST00000580357 MBOAT4Q96T53 435 aa13.86□□□□□ -0.19
IFT20-210ENST00000580357 ZNF665Q9H7R5 613 aa13.86□□□□□ -0.19
IFT20-210ENST00000580357 MOB1AQ9H8S9 216 aa13.86□□□□□ -0.19
IFT20-210ENST00000580357 ZNF319Q9P2F9 582 aa13.86□□□□□ -0.19
IFT20-210ENST00000580357 LPAR3Q9UBY5 353 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms