RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 OR6N1Q8NGY5 312 aa11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 WDR89Q96FK6 387 aaPredicted RBP11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 S100A16Q96FQ6 103 aaKnown RBP11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 SORCS2Q96PQ0 1159 aa11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 DPCDQ9BVM2 203 aaPredicted RBP11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 OR5V1Q9UGF6 321 aa11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 TP53TG5Q9Y2B4 290 aa11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 EMC9Q9Y3B6 208 aa11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 LOC102725191A0A1B0GVB3 256 aa11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ZNF432O94892 652 aa11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 TGM6O95932 706 aa11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ANXA3P12429 323 aa11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 CTRB1P17538 263 aa11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 TMEM69Q5SWH9 247 aa11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 CTRB2Q6GPI1 263 aa11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 TUSC5Q8IXB3 177 aa11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 NKAIN3Q8N8D7 197 aa11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 SLC26A10Q8NG04 563 aa11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 C11orf40Q8WZ69 217 aa11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 WDYHV1Q96HA8 205 aa11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 OR10A4Q9H209 315 aa11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 DPAGT1Q9H3H5 408 aa11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 DHDHQ9UQ10 334 aa11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 MEIS3P1A6NDR6 274 aa11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 NPIPB13A6NJU9 1138 aa11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 NPIPB4C9JG80 1138 aa11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 GPR171O14626 319 aa11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 DHFRP00374 187 aa11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 MEIOBQ8N635 442 aa11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 GALNT11Q8NCW6 608 aa11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 OR10H5Q8NGA6 315 aa11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 OR52N5Q8NH56 324 aa11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 RNF128Q8TEB7 428 aa11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 CPNE4Q96A23 557 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ALKBH3Q96Q83 286 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 RBM24Q9BX46 236 aaKnown RBP11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 PRRG4Q9BZD6 226 aa11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 OR51J1Q9H342 316 aa11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 CALHM2Q9HA72 323 aa11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ZNF224Q9NZL3 707 aa11.17□□□□□ -0.62
CDK5RAP3-217ENST00000580287 MKRN2OSH3BPM6 223 aa11.16□□□□□ -0.62
CDK5RAP3-217ENST00000580287 VAMP5O95183 116 aa11.16□□□□□ -0.62
CDK5RAP3-217ENST00000580287 MPC2O95563 127 aa11.16□□□□□ -0.62
CDK5RAP3-217ENST00000580287 DCTDP32321 178 aa11.16□□□□□ -0.62
CDK5RAP3-217ENST00000580287 VEGFCP49767 419 aa11.16□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ART1P52961 327 aa11.16□□□□□ -0.62
CDK5RAP3-217ENST00000580287 EXOSC2Q13868 293 aaKnown RBP11.16□□□□□ -0.62
CDK5RAP3-217ENST00000580287 THEM4Q5T1C6 240 aa11.16□□□□□ -0.62
CDK5RAP3-217ENST00000580287 IGFL3Q6UXB1 125 aa11.16□□□□□ -0.62
CDK5RAP3-217ENST00000580287 BAIAP2L2Q6UXY1 529 aa11.16□□□□□ -0.62
CDK5RAP3-217ENST00000580287 LHFPL2Q6ZUX7 228 aa11.16□□□□□ -0.62
CDK5RAP3-217ENST00000580287 LRRTM1Q86UE6 522 aa11.16□□□□□ -0.62
CDK5RAP3-217ENST00000580287 GLB1L2Q8IW92 636 aa11.16□□□□□ -0.62
CDK5RAP3-217ENST00000580287 TMEM123Q8N131 208 aa11.16□□□□□ -0.62
CDK5RAP3-217ENST00000580287 CHIAQ9BZP6 476 aa11.16□□□□□ -0.62
CDK5RAP3-217ENST00000580287 C12orf4Q9NQ89 552 aa11.16□□□□□ -0.62
CDK5RAP3-217ENST00000580287 LHX6Q9UPM6 363 aa11.16□□□□□ -0.62
CDK5RAP3-217ENST00000580287 POLR1DQ9Y2S0 133 aa11.16□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ITPR1Q14643 2758 aa11.16□□□□□ -0.62
CDK5RAP3-217ENST00000580287 SSNA1O43805 119 aa11.16□□□□□ -0.62
CDK5RAP3-217ENST00000580287 KHDRBS3O75525 346 aaKnown RBP11.16□□□□□ -0.62
CDK5RAP3-217ENST00000580287 CDK2P24941 298 aa11.16□□□□□ -0.62
CDK5RAP3-217ENST00000580287 CSNK1A1P48729 337 aa11.16□□□□□ -0.62
CDK5RAP3-217ENST00000580287 KLF9Q13886 244 aaPredicted RBP11.16□□□□□ -0.62
CDK5RAP3-217ENST00000580287 HIST3H3Q16695 136 aa11.16□□□□□ -0.62
CDK5RAP3-217ENST00000580287 LGALSLQ3ZCW2 172 aaPredicted RBP11.16□□□□□ -0.62
CDK5RAP3-217ENST00000580287 CLLU1Q5K131 121 aa11.16□□□□□ -0.62
CDK5RAP3-217ENST00000580287 C9orf135Q5VTT2 229 aa11.16□□□□□ -0.62
CDK5RAP3-217ENST00000580287 Q6ZS92 163 aa11.16□□□□□ -0.62
CDK5RAP3-217ENST00000580287 Q6ZTK2 550 aa11.16□□□□□ -0.62
CDK5RAP3-217ENST00000580287 FREM1Q5H8C1 2179 aa11.15□□□□□ -0.62
CDK5RAP3-217ENST00000580287 CYTIPO60759 359 aa11.15□□□□□ -0.62
CDK5RAP3-217ENST00000580287 GSG1Q2KHT4 349 aa11.15□□□□□ -0.62
CDK5RAP3-217ENST00000580287 CD276Q5ZPR3 534 aa11.15□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ABLIM2Q6H8Q1 611 aa11.15□□□□□ -0.62
CDK5RAP3-217ENST00000580287 SLC25A47Q6Q0C1 308 aa11.15□□□□□ -0.62
CDK5RAP3-217ENST00000580287 AAED1Q7RTV5 226 aa11.15□□□□□ -0.62
CDK5RAP3-217ENST00000580287 LUZP2Q86TE4 346 aa11.15□□□□□ -0.62
CDK5RAP3-217ENST00000580287 CDH24Q86UP0 819 aa11.15□□□□□ -0.62
CDK5RAP3-217ENST00000580287 LRRC18Q8N456 261 aa11.15□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ZNF454Q8N9F8 522 aa11.15□□□□□ -0.62
CDK5RAP3-217ENST00000580287 OR51D1Q8NGF3 324 aa11.15□□□□□ -0.62
CDK5RAP3-217ENST00000580287 SMIM4Q8WVI0 70 aa11.15□□□□□ -0.62
CDK5RAP3-217ENST00000580287 SEC22CQ9BRL7 303 aa11.15□□□□□ -0.62
CDK5RAP3-217ENST00000580287 PTTG3PQ9NZH4 202 aa11.15□□□□□ -0.62
CDK5RAP3-217ENST00000580287 MYEF2Q9P2K5 600 aaKnown RBP11.15□□□□□ -0.62
CDK5RAP3-217ENST00000580287 TRBV5-7A0A0A0MS05 114 aa11.15□□□□□ -0.62
CDK5RAP3-217ENST00000580287 TMEM269A0A1B0GVZ9 245 aa11.15□□□□□ -0.62
CDK5RAP3-217ENST00000580287 HSPB2A8KAH6 182 aa11.15□□□□□ -0.62
CDK5RAP3-217ENST00000580287 LINC01387J3KSC0 135 aa11.15□□□□□ -0.62
CDK5RAP3-217ENST00000580287 CD2P06729 351 aa11.15□□□□□ -0.62
CDK5RAP3-217ENST00000580287 H2BFMP0C1H6 154 aa11.15□□□□□ -0.62
CDK5RAP3-217ENST00000580287 H2AFB2P0C5Z0 115 aa11.15□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ZNF81P51508 661 aa11.15□□□□□ -0.62
CDK5RAP3-217ENST00000580287 EFNB2P52799 333 aa11.15□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ZP1P60852 638 aa11.15□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ROM1Q03395 351 aa11.15□□□□□ -0.62
CDK5RAP3-217ENST00000580287 GRK1Q15835 563 aa11.15□□□□□ -0.62
CDK5RAP3-217ENST00000580287 HSPB2Q16082 182 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms