RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 G6PC2Q9NQR9 355 aa3.23□□□□□ -1.89
SMARCE1-215ENST00000578995 ZNF701Q9NV72 531 aaPredicted RBP3.23□□□□□ -1.89
SMARCE1-215ENST00000578995 TBCCD1Q9NVR7 557 aa3.23□□□□□ -1.89
SMARCE1-215ENST00000578995 CLN6Q9NWW5 311 aa3.23□□□□□ -1.89
SMARCE1-215ENST00000578995 FAM206AQ9NX38 181 aa3.23□□□□□ -1.89
SMARCE1-215ENST00000578995 SLCO1C1Q9NYB5 712 aa3.23□□□□□ -1.89
SMARCE1-215ENST00000578995 PLEK2Q9NYT0 353 aa3.23□□□□□ -1.89
SMARCE1-215ENST00000578995 PSORS1C1Q9UIG5 152 aa3.23□□□□□ -1.89
SMARCE1-215ENST00000578995 LSM2Q9Y333 95 aaKnown RBP3.23□□□□□ -1.89
SMARCE1-215ENST00000578995 STARD10Q9Y365 291 aa3.23□□□□□ -1.89
SMARCE1-215ENST00000578995 LRP12Q9Y561 859 aa3.23□□□□□ -1.89
SMARCE1-215ENST00000578995 HSPE1-MOB4S4R3N1 261 aa3.23□□□□□ -1.89
SMARCE1-215ENST00000578995 ABCA1O95477 2261 aa3.23□□□□□ -1.89
SMARCE1-215ENST00000578995 TLN2Q9Y4G6 2542 aa3.23□□□□□ -1.89
SMARCE1-215ENST00000578995 WNK2Q9Y3S1 2297 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 A0A1B0GTI1 187 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 hCG_38984A0A1B0GV85 526 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 C5orf49A4QMS7 147 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 ZSCAN5BA6NJL1 495 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 E9PI62 339 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 H3BSA7 217 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 H7C417 338 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 M0R135 149 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 PSMD9O00233 223 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 SLC1A7O00341 560 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 MLNRO43193 412 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 DENRO43583 198 aaKnown RBP3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 XPNPEP2O43895 674 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 MPZL2O60487 215 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 FAM20BO75063 409 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 NCR1O76036 304 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 RAB36O95755 333 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 PTBP3O95758 552 aaKnown RBP3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 IGHV3-13P01766 116 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 CRYAAP02489 173 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 TTRP02766 147 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 LYNP07948 512 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 ADH4P08319 380 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 OR4A8P0C604 315 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 OR2T7P0C7T2 308 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 KITLGP21583 273 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 CCL1P22362 96 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 CRHBPP24387 322 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 ACKR3P25106 362 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 HOXC12P31275 282 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 APOBEC3AP31941 199 aaPredicted RBP3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 VHLP40337 213 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 CAPZA2P47755 286 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 EVX1P49640 407 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 ETV1P50549 477 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 ZNF121P58317 390 aaPredicted RBP3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 CXCR4P61073 352 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 PPP1CBP62140 327 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 ZNF92Q03936 586 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 RAB40BQ12829 278 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 ECH1Q13011 328 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 PSG7Q13046 419 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 EIF2B1Q14232 305 aaKnown RBP3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 GK2Q14410 553 aaPredicted RBP3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 OR8B8Q15620 311 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 TBC1D28Q2M2D7 210 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 C6orf141Q5SZD1 244 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 GLYATL3Q5SZD4 288 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 LCN1P1Q5VSP4 162 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 RNLSQ5VYX0 342 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 KRT80Q6KB66 452 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 ZNF544Q6NX49 715 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 DEGS2Q6QHC5 323 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 SLC22A25Q6T423 547 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 ZNF322Q6U7Q0 402 aaPredicted RBP3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 DRAM2Q6UX65 266 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 PLEKHG7Q6ZR37 379 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 ZNF679Q8IYX0 411 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 PRSS35Q8N3Z0 413 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 OR8B12Q8NGG6 310 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 OR51G2Q8NGK0 314 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 OR2T27Q8NH04 317 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 OR2AE1Q8NHA4 323 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 SLC25A40Q8TBP6 338 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 KLF14Q8TD94 323 aaPredicted RBP3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 RGP1Q92546 391 aaPredicted RBP3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 RORBQ92753 470 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 GGHQ92820 318 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 NINJ1Q92982 152 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 FBXW5Q969U6 566 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 SGK3Q96BR1 496 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 RNFT2Q96EX2 444 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 PELI1Q96FA3 418 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 ZNF799Q96GE5 643 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 PLEKHA8Q96JA3 519 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 C4orf45Q96LM5 186 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 DCLRE1CQ96SD1 692 aaKnown RBP3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 MNTQ99583 582 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 ZNF184Q99676 751 aaPredicted RBP3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 APOL4Q9BPW4 351 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 TTTY10Q9BZA0 68 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 OR2J1Q9GZK6 312 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 PPP1R3EQ9H7J1 279 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 ISG20L2Q9H9L3 353 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms