RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 DNAJB11Q9UBS4 358 aa7.41□□□□□ -1.22
GGA3-207ENST00000578896 CENPVL3A0A0U1RRI6 287 aa7.4□□□□□ -1.22
GGA3-207ENST00000578896 hCG_1807616A0A1W2PRN6 198 aa7.4□□□□□ -1.22
GGA3-207ENST00000578896 POM121CA8CG34 1229 aa7.4□□□□□ -1.22
GGA3-207ENST00000578896 SRRM5B3KS81 715 aa7.4□□□□□ -1.22
GGA3-207ENST00000578896 BHLHE40O14503 412 aa7.4□□□□□ -1.22
GGA3-207ENST00000578896 PHYHO14832 338 aa7.4□□□□□ -1.22
GGA3-207ENST00000578896 TNFRSF13BO14836 293 aaPredicted RBP7.4□□□□□ -1.22
GGA3-207ENST00000578896 TBX1O43435 398 aa7.4□□□□□ -1.22
GGA3-207ENST00000578896 ENSAO43768 121 aaKnown RBP7.4□□□□□ -1.22
GGA3-207ENST00000578896 TOX4O94842 621 aa7.4□□□□□ -1.22
GGA3-207ENST00000578896 GASTP01350 101 aa7.4□□□□□ -1.22
GGA3-207ENST00000578896 TFF1P04155 84 aa7.4□□□□□ -1.22
GGA3-207ENST00000578896 MELTFP08582 738 aa7.4□□□□□ -1.22
GGA3-207ENST00000578896 MMP9P14780 707 aa7.4□□□□□ -1.22
GGA3-207ENST00000578896 PRDX6P30041 224 aa7.4□□□□□ -1.22
GGA3-207ENST00000578896 DLX1P56177 255 aa7.4□□□□□ -1.22
GGA3-207ENST00000578896 GMFBP60983 142 aa7.4□□□□□ -1.22
GGA3-207ENST00000578896 TSPAN31Q12999 210 aa7.4□□□□□ -1.22
GGA3-207ENST00000578896 TAF13Q15543 124 aa7.4□□□□□ -1.22
GGA3-207ENST00000578896 ZNF362Q5T0B9 420 aaPredicted RBP7.4□□□□□ -1.22
GGA3-207ENST00000578896 CYP2R1Q6VVX0 501 aa7.4□□□□□ -1.22
GGA3-207ENST00000578896 Q6YL49 198 aa7.4□□□□□ -1.22
GGA3-207ENST00000578896 ZDHHC21Q8IVQ6 265 aa7.4□□□□□ -1.22
GGA3-207ENST00000578896 GCSAMQ8N6F7 178 aa7.4□□□□□ -1.22
GGA3-207ENST00000578896 OR4Q3Q8NH05 313 aa7.4□□□□□ -1.22
GGA3-207ENST00000578896 LHX4Q969G2 390 aa7.4□□□□□ -1.22
GGA3-207ENST00000578896 SPTSSAQ969W0 71 aa7.4□□□□□ -1.22
GGA3-207ENST00000578896 SLAMF6Q96DU3 332 aa7.4□□□□□ -1.22
GGA3-207ENST00000578896 BTBD10Q9BSF8 475 aa7.4□□□□□ -1.22
GGA3-207ENST00000578896 COPS4Q9BT78 406 aa7.4□□□□□ -1.22
GGA3-207ENST00000578896 FN3KRPQ9HA64 309 aa7.4□□□□□ -1.22
GGA3-207ENST00000578896 C1RLQ9NZP8 487 aa7.4□□□□□ -1.22
GGA3-207ENST00000578896 PDP1Q9P0J1 537 aaPredicted RBP7.4□□□□□ -1.22
GGA3-207ENST00000578896 ERVK-18Q9QC07 812 aa7.4□□□□□ -1.22
GGA3-207ENST00000578896 CD300AQ9UGN4 299 aa7.4□□□□□ -1.22
GGA3-207ENST00000578896 CDH10Q9Y6N8 788 aa7.4□□□□□ -1.22
GGA3-207ENST00000578896 A0A0U1RQK1 487 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 A0A1W2PRD5 423 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 A0A1W2PRF3 423 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 A0A1W2PRM7 423 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 OOEPA6NGQ2 149 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 ZNF879B4DU55 563 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 TNFRSF11BO00300 401 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 ZNF593O00488 134 aaPredicted RBP7.39□□□□□ -1.23
GGA3-207ENST00000578896 DVL1O14640 695 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 IDH3BO43837 385 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 SNX3O60493 162 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 SOX14O95416 240 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 KNG1P01042 644 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 CRYBA1P05813 215 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 HSD17B1P14061 328 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 ATP6V1B2P21281 511 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 IFNGR2P38484 337 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 GYS2P54840 703 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 RAG2P55895 527 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 CSNK2BP67870 215 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 CRMP1Q14194 572 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 MIDNQ504T8 468 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 BTN2A1Q7KYR7 527 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 WDR86Q86TI4 376 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 FAM90A1Q86YD7 464 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 C11orf53Q8IXP5 236 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 CELF2-AS1Q8N7Q2 184 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 OR5T2Q8NGG2 359 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 OR52L1Q8NGH7 329 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 ST8SIA4Q92187 359 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 ERGIC1Q969X5 290 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 WDFY2Q96P53 400 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 CCL13Q99616 98 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 TSSK6Q9BXA6 273 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 SIRPDQ9H106 197 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 SEMA6AQ9H2E6 1030 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 PRDM13Q9H4Q3 707 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 MED20Q9H944 212 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 IL1RAPQ9NPH3 570 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 BRD7Q9NPI1 651 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 TBC1D23Q9NUY8 699 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 ARMC1Q9NVT9 282 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 VNN3Q9NY84 501 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 TAS2R1Q9NYW7 299 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 DNAJC27Q9NZQ0 273 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 MAGEL2Q9UJ55 1249 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 LYVE1Q9Y5Y7 322 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 COMMD3-BMI1R4GMX3 469 aa7.39□□□□□ -1.23
GGA3-207ENST00000578896 IGHV1-69DA0A0B4J2H0 117 aa7.38□□□□□ -1.23
GGA3-207ENST00000578896 FAM183AA6NL82 134 aa7.38□□□□□ -1.23
GGA3-207ENST00000578896 P2RY10O00398 339 aa7.38□□□□□ -1.23
GGA3-207ENST00000578896 GMDSO60547 372 aa7.38□□□□□ -1.23
GGA3-207ENST00000578896 FSTL3O95633 263 aa7.38□□□□□ -1.23
GGA3-207ENST00000578896 IGHV1-69P01742 117 aa7.38□□□□□ -1.23
GGA3-207ENST00000578896 IGHV4-59P01825 116 aa7.38□□□□□ -1.23
GGA3-207ENST00000578896 ANXA2P07355 339 aaKnown RBP7.38□□□□□ -1.23
GGA3-207ENST00000578896 SELLP14151 372 aa7.38□□□□□ -1.23
GGA3-207ENST00000578896 CPT2P23786 658 aa7.38□□□□□ -1.23
GGA3-207ENST00000578896 FMO3P31513 532 aa7.38□□□□□ -1.23
GGA3-207ENST00000578896 OTX1P32242 354 aaPredicted RBP7.38□□□□□ -1.23
GGA3-207ENST00000578896 ENTPD1P49961 510 aa7.38□□□□□ -1.23
GGA3-207ENST00000578896 GFOD2Q3B7J2 385 aa7.38□□□□□ -1.23
GGA3-207ENST00000578896 PDLIM3Q53GG5 364 aaPredicted RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms