RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 HRASLSQ9HDD0 168 aa9.76□□□□□ -0.85
SKA2-204ENST00000578519 CGGBP1Q9UFW8 167 aaPredicted RBP9.76□□□□□ -0.85
SKA2-204ENST00000578519 MRPS28Q9Y2Q9 187 aaKnown RBP9.76□□□□□ -0.85
SKA2-204ENST00000578519 BOLA2-SMG1P6H3BVE0 249 aa9.75□□□□□ -0.85
SKA2-204ENST00000578519 LDLRAD4O15165 306 aa9.75□□□□□ -0.85
SKA2-204ENST00000578519 LANCL1O43813 399 aa9.75□□□□□ -0.85
SKA2-204ENST00000578519 IGHG3P01860 377 aa9.75□□□□□ -0.85
SKA2-204ENST00000578519 SERPINA5P05154 406 aa9.75□□□□□ -0.85
SKA2-204ENST00000578519 LPLP06858 475 aa9.75□□□□□ -0.85
SKA2-204ENST00000578519 CELA3AP09093 270 aa9.75□□□□□ -0.85
SKA2-204ENST00000578519 AKAIN1P0CW23 69 aa9.75□□□□□ -0.85
SKA2-204ENST00000578519 SLC2A1P11166 492 aa9.75□□□□□ -0.85
SKA2-204ENST00000578519 B4GALT1P15291 398 aa9.75□□□□□ -0.85
SKA2-204ENST00000578519 PSMB1P20618 241 aaKnown RBP9.75□□□□□ -0.85
SKA2-204ENST00000578519 CRYGSP22914 178 aa9.75□□□□□ -0.85
SKA2-204ENST00000578519 GIFP27352 417 aa9.75□□□□□ -0.85
SKA2-204ENST00000578519 TAS2R19P59542 299 aa9.75□□□□□ -0.85
SKA2-204ENST00000578519 ARF1P84077 181 aaKnown RBP9.75□□□□□ -0.85
SKA2-204ENST00000578519 TGFBR3Q03167 851 aa9.75□□□□□ -0.85
SKA2-204ENST00000578519 MALLQ13021 153 aa9.75□□□□□ -0.85
SKA2-204ENST00000578519 RNASE12Q5GAN4 147 aaKnown RBP9.75□□□□□ -0.85
SKA2-204ENST00000578519 ATP1A1-AS1Q5TC04 95 aa9.75□□□□□ -0.85
SKA2-204ENST00000578519 STEAP2Q8NFT2 490 aa9.75□□□□□ -0.85
SKA2-204ENST00000578519 FDCSPQ8NFU4 85 aa9.75□□□□□ -0.85
SKA2-204ENST00000578519 OR56B1Q8NGI3 324 aa9.75□□□□□ -0.85
SKA2-204ENST00000578519 OR51A2Q8NGJ7 313 aa9.75□□□□□ -0.85
SKA2-204ENST00000578519 SPSB1Q96BD6 273 aa9.75□□□□□ -0.85
SKA2-204ENST00000578519 GMPPAQ96IJ6 420 aaPredicted RBP9.75□□□□□ -0.85
SKA2-204ENST00000578519 ALKBH3Q96Q83 286 aaPredicted RBP9.75□□□□□ -0.85
SKA2-204ENST00000578519 MED28Q9H204 178 aa9.75□□□□□ -0.85
SKA2-204ENST00000578519 CNTD2Q9H8S5 307 aa9.75□□□□□ -0.85
SKA2-204ENST00000578519 LHX6Q9UPM6 363 aa9.75□□□□□ -0.85
SKA2-204ENST00000578519 SLC7A11Q9UPY5 501 aa9.75□□□□□ -0.85
SKA2-204ENST00000578519 AQP7O14520 342 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 SSX4O60224 188 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 CEACAM4O75871 244 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 SNAPC5O75971 98 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 ABOP16442 354 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 STOMP27105 288 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 MPGP29372 298 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 CBX5P45973 191 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 SRP9P49458 86 aaKnown RBP9.74□□□□□ -0.85
SKA2-204ENST00000578519 PSG4Q00888 419 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 PMPCAQ10713 525 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 CLN3Q13286 438 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 MRPL49Q13405 166 aaKnown RBP9.74□□□□□ -0.85
SKA2-204ENST00000578519 MEF2DQ14814 521 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 PCGF3Q3KNV8 242 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 TBRG1Q3YBR2 411 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 ZFP69Q49AA0 526 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 CLVS2Q5SYC1 327 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 METTL11BQ5VVY1 283 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 OR2A2Q6IF42 318 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 ZNF774Q6NX45 483 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 GLIPR1L1Q6UWM5 242 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 SKA3Q8IX90 412 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 FTMTQ8N4E7 242 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 TMEM229BQ8NBD8 167 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 CHST4Q8NCG5 386 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 OR52N4Q8NGI2 321 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 FNDC9Q8TBE3 224 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 SLC7A6Q92536 515 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 DACT3Q96B18 629 aaPredicted RBP9.74□□□□□ -0.85
SKA2-204ENST00000578519 MED30Q96HR3 178 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 REEP6Q96HR9 211 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 CHST5Q9GZS9 411 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 PRDM14Q9GZV8 571 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 WNT5BQ9H1J7 359 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 AUNIPQ9H7T9 357 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 SLC7A10Q9NS82 523 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 MCUBQ9NWR8 336 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 PIGLQ9Y2B2 252 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 ALG5Q9Y673 324 aa9.74□□□□□ -0.85
SKA2-204ENST00000578519 CIB4A0PJX0 185 aa9.73□□□□□ -0.85
SKA2-204ENST00000578519 AHRRA9YTQ3 701 aa9.73□□□□□ -0.85
SKA2-204ENST00000578519 DISC1C4P0D8 188 aa9.73□□□□□ -0.85
SKA2-204ENST00000578519 ZNF780AO75290 641 aaPredicted RBP9.73□□□□□ -0.85
SKA2-204ENST00000578519 KDM4BO94953 1096 aa9.73□□□□□ -0.85
SKA2-204ENST00000578519 CNOT4O95628 575 aaKnown RBP9.73□□□□□ -0.85
SKA2-204ENST00000578519 CYB5AP00167 134 aa9.73□□□□□ -0.85
SKA2-204ENST00000578519 MT-ND4P03905 459 aa9.73□□□□□ -0.85
SKA2-204ENST00000578519 ADRB1P08588 477 aa9.73□□□□□ -0.85
SKA2-204ENST00000578519 GSTP1P09211 210 aaKnown RBP9.73□□□□□ -0.85
SKA2-204ENST00000578519 GTF2F2P13984 249 aa9.73□□□□□ -0.85
SKA2-204ENST00000578519 TBPP20226 339 aa9.73□□□□□ -0.85
SKA2-204ENST00000578519 ALDH3B1P43353 468 aa9.73□□□□□ -0.85
SKA2-204ENST00000578519 ATP1B3P54709 279 aa9.73□□□□□ -0.85
SKA2-204ENST00000578519 RRAS2P62070 204 aaPredicted RBP9.73□□□□□ -0.85
SKA2-204ENST00000578519 MAB21L1Q13394 359 aa9.73□□□□□ -0.85
SKA2-204ENST00000578519 PPA1Q15181 289 aa9.73□□□□□ -0.85
SKA2-204ENST00000578519 CARTPTQ16568 116 aa9.73□□□□□ -0.85
SKA2-204ENST00000578519 PNLIPRP3Q17RR3 467 aa9.73□□□□□ -0.85
SKA2-204ENST00000578519 KRTAP27-1Q3LI81 207 aa9.73□□□□□ -0.85
SKA2-204ENST00000578519 FBXW9Q5XUX1 488 aa9.73□□□□□ -0.85
SKA2-204ENST00000578519 ASPHD2Q6ICH7 369 aa9.73□□□□□ -0.85
SKA2-204ENST00000578519 ZNF782Q6ZMW2 699 aaPredicted RBP9.73□□□□□ -0.85
SKA2-204ENST00000578519 LHFPL2Q6ZUX7 228 aa9.73□□□□□ -0.85
SKA2-204ENST00000578519 LYPD6Q86Y78 171 aa9.73□□□□□ -0.85
SKA2-204ENST00000578519 ZNF584Q8IVC4 421 aa9.73□□□□□ -0.85
SKA2-204ENST00000578519 OR4D6Q8NGJ1 314 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms