RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	LRRC28	Q86X40	367 aa	Predicted RBP	11.5	□□□□□ -0.57
CSNK1D-208	ENST00000578501	KLB	Q86Z14	1044 aa		11.5	□□□□□ -0.57
CSNK1D-208	ENST00000578501	PLPP7	Q8NBV4	271 aa		11.5	□□□□□ -0.57
CSNK1D-208	ENST00000578501	OR51F2	Q8NH61	342 aa		11.5	□□□□□ -0.57
CSNK1D-208	ENST00000578501	OR2AE1	Q8NHA4	323 aa		11.5	□□□□□ -0.57
CSNK1D-208	ENST00000578501	TMEM163	Q8TC26	289 aa		11.5	□□□□□ -0.57
CSNK1D-208	ENST00000578501	RAB3IP	Q96QF0	476 aa	Predicted RBP	11.5	□□□□□ -0.57
CSNK1D-208	ENST00000578501	PKP2	Q99959	881 aa		11.5	□□□□□ -0.57
CSNK1D-208	ENST00000578501	RGCC	Q9H4X1	137 aa		11.5	□□□□□ -0.57
CSNK1D-208	ENST00000578501	HAO2	Q9NYQ3	351 aa		11.5	□□□□□ -0.57
CSNK1D-208	ENST00000578501	LAMP5	Q9UJQ1	280 aa		11.5	□□□□□ -0.57
CSNK1D-208	ENST00000578501	TMEM14A	Q9Y6G1	99 aa		11.5	□□□□□ -0.57
CSNK1D-208	ENST00000578501	MALRD1	Q5VYJ5	2156 aa		11.5	□□□□□ -0.57
CSNK1D-208	ENST00000578501	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	11.49	□□□□□ -0.57	6e-14	■■■■□ 22.3
CSNK1D-208	ENST00000578501	TRAV20	A0A0B4J274	112 aa		11.49	□□□□□ -0.57
CSNK1D-208	ENST00000578501	ACOD1	A6NK06	481 aa		11.49	□□□□□ -0.57
CSNK1D-208	ENST00000578501	SLC22A31	A6NKX4	558 aa		11.49	□□□□□ -0.57
CSNK1D-208	ENST00000578501		F5H5P2	479 aa		11.49	□□□□□ -0.57
CSNK1D-208	ENST00000578501	TMEM178B	H3BS89	294 aa		11.49	□□□□□ -0.57
CSNK1D-208	ENST00000578501	PTBP3	O95758	552 aa	Known RBP	11.49	□□□□□ -0.57
CSNK1D-208	ENST00000578501	HLA-DPB1	P04440	258 aa		11.49	□□□□□ -0.57
CSNK1D-208	ENST00000578501	CPT2	P23786	658 aa		11.49	□□□□□ -0.57
CSNK1D-208	ENST00000578501	MMP16	P51512	607 aa		11.49	□□□□□ -0.57
CSNK1D-208	ENST00000578501	RAD23A	P54725	363 aa		11.49	□□□□□ -0.57
CSNK1D-208	ENST00000578501	PRSS12	P56730	875 aa		11.49	□□□□□ -0.57
CSNK1D-208	ENST00000578501	BTG1	P62324	171 aa		11.49	□□□□□ -0.57
CSNK1D-208	ENST00000578501	FAM3A	P98173	230 aa		11.49	□□□□□ -0.57
CSNK1D-208	ENST00000578501	MAB21L1	Q13394	359 aa		11.49	□□□□□ -0.57
CSNK1D-208	ENST00000578501	TIGD6	Q17RP2	521 aa		11.49	□□□□□ -0.57
CSNK1D-208	ENST00000578501	CR1L	Q2VPA4	569 aa		11.49	□□□□□ -0.57
CSNK1D-208	ENST00000578501	KCTD18	Q6PI47	426 aa	Predicted RBP	11.49	□□□□□ -0.57
CSNK1D-208	ENST00000578501	GLCCI1	Q86VQ1	547 aa		11.49	□□□□□ -0.57
CSNK1D-208	ENST00000578501	GID4	Q8IVV7	300 aa		11.49	□□□□□ -0.57
CSNK1D-208	ENST00000578501	TCEANC	Q8N8B7	351 aa		11.49	□□□□□ -0.57
CSNK1D-208	ENST00000578501	SPERT	Q8NA61	448 aa		11.49	□□□□□ -0.57
CSNK1D-208	ENST00000578501		Q8TCH9	128 aa		11.49	□□□□□ -0.57
CSNK1D-208	ENST00000578501	ASB17	Q8WXJ9	295 aa		11.49	□□□□□ -0.57
CSNK1D-208	ENST00000578501	TMEM186	Q96B77	213 aa		11.49	□□□□□ -0.57
CSNK1D-208	ENST00000578501	SGK3	Q96BR1	496 aa		11.49	□□□□□ -0.57
CSNK1D-208	ENST00000578501	MNT	Q99583	582 aa		11.49	□□□□□ -0.57
CSNK1D-208	ENST00000578501	GAL3ST1	Q99999	423 aa		11.49	□□□□□ -0.57
CSNK1D-208	ENST00000578501	OR10A2	Q9H208	303 aa		11.49	□□□□□ -0.57
CSNK1D-208	ENST00000578501	DCAF16	Q9NXF7	216 aa		11.49	□□□□□ -0.57
CSNK1D-208	ENST00000578501	USE1	Q9NZ43	259 aa		11.49	□□□□□ -0.57
CSNK1D-208	ENST00000578501	H2AFY2	Q9P0M6	372 aa	Predicted RBP	11.49	□□□□□ -0.57
CSNK1D-208	ENST00000578501	KLHDC2	Q9Y2U9	406 aa		11.49	□□□□□ -0.57
CSNK1D-208	ENST00000578501	CUBN	O60494	3623 aa		11.48	□□□□□ -0.57
CSNK1D-208	ENST00000578501	ISPD	A4D126	451 aa		11.48	□□□□□ -0.57
CSNK1D-208	ENST00000578501	SAC3D1	A6NKF1	404 aa		11.48	□□□□□ -0.57
CSNK1D-208	ENST00000578501	LRRC30	A6NM36	301 aa		11.48	□□□□□ -0.57
CSNK1D-208	ENST00000578501	TBX1	O43435	398 aa		11.48	□□□□□ -0.57
CSNK1D-208	ENST00000578501	ZNF254	O75437	659 aa		11.48	□□□□□ -0.57
CSNK1D-208	ENST00000578501	ALPL	P05186	524 aa		11.48	□□□□□ -0.57
CSNK1D-208	ENST00000578501	SBK2	P0C263	348 aa		11.48	□□□□□ -0.57
CSNK1D-208	ENST00000578501	CA6	P23280	308 aa		11.48	□□□□□ -0.57
CSNK1D-208	ENST00000578501	DCTD	P32321	178 aa		11.48	□□□□□ -0.57
CSNK1D-208	ENST00000578501	POLR2I	P36954	125 aa	Known RBP	11.48	□□□□□ -0.57
CSNK1D-208	ENST00000578501	PSMA6	P60900	246 aa	Known RBP	11.48	□□□□□ -0.57
CSNK1D-208	ENST00000578501	ROM1	Q03395	351 aa		11.48	□□□□□ -0.57
CSNK1D-208	ENST00000578501	MZT1	Q08AG7	82 aa		11.48	□□□□□ -0.57
CSNK1D-208	ENST00000578501	OR8G1	Q15617	311 aa		11.48	□□□□□ -0.57
CSNK1D-208	ENST00000578501	FAM57B	Q71RH2	274 aa		11.48	□□□□□ -0.57
CSNK1D-208	ENST00000578501	C1orf87	Q8N0U7	546 aa		11.48	□□□□□ -0.57
CSNK1D-208	ENST00000578501	KLHL36	Q8N4N3	616 aa		11.48	□□□□□ -0.57
CSNK1D-208	ENST00000578501	SPIC	Q8N5J4	248 aa		11.48	□□□□□ -0.57
CSNK1D-208	ENST00000578501	OR56B2P	Q8NGI1	322 aa		11.48	□□□□□ -0.57
CSNK1D-208	ENST00000578501	ITFG2	Q969R8	447 aa		11.48	□□□□□ -0.57
CSNK1D-208	ENST00000578501	REEP6	Q96HR9	211 aa		11.48	□□□□□ -0.57
CSNK1D-208	ENST00000578501	IL4I1	Q96RQ9	567 aa		11.48	□□□□□ -0.57
CSNK1D-208	ENST00000578501	CNN2	Q99439	309 aa	Known RBP	11.48	□□□□□ -0.57
CSNK1D-208	ENST00000578501	HIF1AN	Q9NWT6	349 aa		11.48	□□□□□ -0.57
CSNK1D-208	ENST00000578501	DNAJC27	Q9NZQ0	273 aa		11.48	□□□□□ -0.57
CSNK1D-208	ENST00000578501	ZNF319	Q9P2F9	582 aa		11.48	□□□□□ -0.57
CSNK1D-208	ENST00000578501	ZNF391	Q9UJN7	358 aa		11.48	□□□□□ -0.57
CSNK1D-208	ENST00000578501	LRP12	Q9Y561	859 aa		11.48	□□□□□ -0.57
CSNK1D-208	ENST00000578501	N6AMT1	Q9Y5N5	214 aa		11.48	□□□□□ -0.57
CSNK1D-208	ENST00000578501	DYSF	O75923	2080 aa		11.48	□□□□□ -0.57
CSNK1D-208	ENST00000578501	hCG_38984	A0A1B0GV85	526 aa		11.47	□□□□□ -0.57
CSNK1D-208	ENST00000578501	SRD5A1	P18405	259 aa		11.47	□□□□□ -0.57
CSNK1D-208	ENST00000578501	MDH2	P40926	338 aa	Known RBP	11.47	□□□□□ -0.57
CSNK1D-208	ENST00000578501	HCCS	P53701	268 aa		11.47	□□□□□ -0.57
CSNK1D-208	ENST00000578501	ZMYND11	Q15326	602 aa		11.47	□□□□□ -0.57
CSNK1D-208	ENST00000578501	SNCB	Q16143	134 aa		11.47	□□□□□ -0.57
CSNK1D-208	ENST00000578501	LRRN1	Q6UXK5	716 aa		11.47	□□□□□ -0.57
CSNK1D-208	ENST00000578501	BCDIN3D	Q7Z5W3	292 aa	Known RBP	11.47	□□□□□ -0.57
CSNK1D-208	ENST00000578501	KRT77	Q7Z794	578 aa		11.47	□□□□□ -0.57
CSNK1D-208	ENST00000578501	MOGAT3	Q86VF5	341 aa		11.47	□□□□□ -0.57
CSNK1D-208	ENST00000578501	ZNF679	Q8IYX0	411 aa		11.47	□□□□□ -0.57
CSNK1D-208	ENST00000578501	MUC20	Q8N307	709 aa	Predicted RBP	11.47	□□□□□ -0.57
CSNK1D-208	ENST00000578501	CSNK2A3	Q8NEV1	391 aa		11.47	□□□□□ -0.57
CSNK1D-208	ENST00000578501	OR8J1	Q8NGP2	316 aa		11.47	□□□□□ -0.57
CSNK1D-208	ENST00000578501	ZNF420	Q8TAQ5	688 aa	Predicted RBP	11.47	□□□□□ -0.57
CSNK1D-208	ENST00000578501	TRUB1	Q8WWH5	349 aa	Known RBP	11.47	□□□□□ -0.57
CSNK1D-208	ENST00000578501	PGAM5	Q96HS1	289 aa		11.47	□□□□□ -0.57
CSNK1D-208	ENST00000578501	ADAT1	Q9BUB4	502 aa	Known RBP	11.47	□□□□□ -0.57
CSNK1D-208	ENST00000578501	MRO	Q9BYG7	248 aa		11.47	□□□□□ -0.57
CSNK1D-208	ENST00000578501	RIBC2	Q9H4K1	309 aa		11.47	□□□□□ -0.57
CSNK1D-208	ENST00000578501	ADGRL4	Q9HBW9	690 aa		11.47	□□□□□ -0.57
CSNK1D-208	ENST00000578501	S100A14	Q9HCY8	104 aa		11.47	□□□□□ -0.57
CSNK1D-208	ENST00000578501	WARS2	Q9UGM6	360 aa	Known RBP	11.47	□□□□□ -0.57

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