RNA–Protein interactions for RNA: ENST00000578315.1

UPF3AP2-202, Transcript of UPF3A pseudogene 2, humanhuman

TSL 5 BASIC

Gene UPF3AP2, Length 730 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-202ENST00000578315 AURKCQ9UQB9 309 aa11.16□□□□□ -0.62
UPF3AP2-202ENST00000578315 TMEM5Q9Y2B1 443 aa11.16□□□□□ -0.62
UPF3AP2-202ENST00000578315 N6AMT1Q9Y5N5 214 aa11.16□□□□□ -0.62
UPF3AP2-202ENST00000578315 PLXNB1O43157 2135 aa11.15□□□□□ -0.62
UPF3AP2-202ENST00000578315 LOC100653049A0A140TA62 436 aa11.15□□□□□ -0.62
UPF3AP2-202ENST00000578315 MEIOCA2RUB1 952 aa11.15□□□□□ -0.62
UPF3AP2-202ENST00000578315 NPFFO15130 113 aa11.15□□□□□ -0.62
UPF3AP2-202ENST00000578315 GPR37O15354 613 aa11.15□□□□□ -0.62
UPF3AP2-202ENST00000578315 KRT34O76011 436 aa11.15□□□□□ -0.62
UPF3AP2-202ENST00000578315 HLA-DQA2P01906 255 aa11.15□□□□□ -0.62
UPF3AP2-202ENST00000578315 EEF1B2P24534 225 aaKnown RBP11.15□□□□□ -0.62
UPF3AP2-202ENST00000578315 RPS6KA3P51812 740 aa11.15□□□□□ -0.62
UPF3AP2-202ENST00000578315 TPTEP56180 551 aa11.15□□□□□ -0.62
UPF3AP2-202ENST00000578315 SF3A3Q12874 501 aaKnown RBP eCLIP11.15□□□□□ -0.62
UPF3AP2-202ENST00000578315 ECH1Q13011 328 aa11.15□□□□□ -0.62
UPF3AP2-202ENST00000578315 IKZF1Q13422 519 aa11.15□□□□□ -0.62
UPF3AP2-202ENST00000578315 DPY19L2P2Q6ZN68 376 aa11.15□□□□□ -0.62
UPF3AP2-202ENST00000578315 REC114Q7Z4M0 266 aa11.15□□□□□ -0.62
UPF3AP2-202ENST00000578315 TSEN54Q7Z6J9 526 aaKnown RBP11.15□□□□□ -0.62
UPF3AP2-202ENST00000578315 GALNT4Q8N4A0 578 aa11.15□□□□□ -0.62
UPF3AP2-202ENST00000578315 FAM216BQ8N7L0 139 aa11.15□□□□□ -0.62
UPF3AP2-202ENST00000578315 PPP1R35Q8TAP8 253 aa11.15□□□□□ -0.62
UPF3AP2-202ENST00000578315 SEH1LQ96EE3 360 aa11.15□□□□□ -0.62
UPF3AP2-202ENST00000578315 HSH2DQ96JZ2 352 aa11.15□□□□□ -0.62
UPF3AP2-202ENST00000578315 ERMAPQ96PL5 475 aaPredicted RBP11.15□□□□□ -0.62
UPF3AP2-202ENST00000578315 NMNAT3Q96T66 252 aa11.15□□□□□ -0.62
UPF3AP2-202ENST00000578315 NSRP1Q9H0G5 558 aaKnown RBP11.15□□□□□ -0.62
UPF3AP2-202ENST00000578315 FN3KQ9H479 309 aa11.15□□□□□ -0.62
UPF3AP2-202ENST00000578315 RPRD1BQ9NQG5 326 aaKnown RBP11.15□□□□□ -0.62
UPF3AP2-202ENST00000578315 INTS9Q9NV88 658 aaKnown RBP11.15□□□□□ -0.62
UPF3AP2-202ENST00000578315 FBLN5Q9UBX5 448 aa11.15□□□□□ -0.62
UPF3AP2-202ENST00000578315 NOP16Q9Y3C1 178 aaKnown RBP11.15□□□□□ -0.62
UPF3AP2-202ENST00000578315 KMT2CQ8NEZ4 4911 aaKnown RBP11.14□□□□□ -0.63
UPF3AP2-202ENST00000578315 UNC119BA6NIH7 251 aa11.14□□□□□ -0.63
UPF3AP2-202ENST00000578315 M0R135 149 aa11.14□□□□□ -0.63
UPF3AP2-202ENST00000578315 TXNDC12O95881 172 aa11.14□□□□□ -0.63
UPF3AP2-202ENST00000578315 NPPAP01160 153 aa11.14□□□□□ -0.63
UPF3AP2-202ENST00000578315 LHBP01229 141 aa11.14□□□□□ -0.63
UPF3AP2-202ENST00000578315 SAA4P35542 130 aa11.14□□□□□ -0.63
UPF3AP2-202ENST00000578315 RPS27P42677 84 aaKnown RBP11.14□□□□□ -0.63
UPF3AP2-202ENST00000578315 OMPP47874 163 aa11.14□□□□□ -0.63
UPF3AP2-202ENST00000578315 LOXL3P58215 753 aa11.14□□□□□ -0.63
UPF3AP2-202ENST00000578315 KLF10Q13118 480 aa11.14□□□□□ -0.63
UPF3AP2-202ENST00000578315 LY6EQ16553 131 aa11.14□□□□□ -0.63
UPF3AP2-202ENST00000578315 PCK2Q16822 640 aa11.14□□□□□ -0.63
UPF3AP2-202ENST00000578315 FGD3Q5JSP0 725 aa11.14□□□□□ -0.63
UPF3AP2-202ENST00000578315 WDR38Q5JTN6 314 aa11.14□□□□□ -0.63
UPF3AP2-202ENST00000578315 GLYATL3Q5SZD4 288 aa11.14□□□□□ -0.63
UPF3AP2-202ENST00000578315 TEX36Q5VZQ5 186 aa11.14□□□□□ -0.63
UPF3AP2-202ENST00000578315 CMTM4Q8IZR5 234 aa11.14□□□□□ -0.63
UPF3AP2-202ENST00000578315 Q8N7P7 452 aa11.14□□□□□ -0.63
UPF3AP2-202ENST00000578315 PLPP7Q8NBV4 271 aa11.14□□□□□ -0.63
UPF3AP2-202ENST00000578315 LY6G5BQ8NDX9 201 aa11.14□□□□□ -0.63
UPF3AP2-202ENST00000578315 OR4K13Q8NH42 304 aa11.14□□□□□ -0.63
UPF3AP2-202ENST00000578315 NPRL2Q8WTW4 380 aa11.14□□□□□ -0.63
UPF3AP2-202ENST00000578315 LRRC29Q8WV35 223 aa11.14□□□□□ -0.63
UPF3AP2-202ENST00000578315 SGCDQ92629 289 aa11.14□□□□□ -0.63
UPF3AP2-202ENST00000578315 ZNF799Q96GE5 643 aa11.14□□□□□ -0.63
UPF3AP2-202ENST00000578315 MAP6Q96JE9 813 aa11.14□□□□□ -0.63
UPF3AP2-202ENST00000578315 KAAG1Q9UBP8 84 aa11.14□□□□□ -0.63
UPF3AP2-202ENST00000578315 CYB5R1Q9UHQ9 305 aa11.14□□□□□ -0.63
UPF3AP2-202ENST00000578315 H3BUX3 64 aa11.13□□□□□ -0.63
UPF3AP2-202ENST00000578315 CXCR6O00574 342 aa11.13□□□□□ -0.63
UPF3AP2-202ENST00000578315 BHLHE40O14503 412 aa11.13□□□□□ -0.63
UPF3AP2-202ENST00000578315 RENP00797 406 aa11.13□□□□□ -0.63
UPF3AP2-202ENST00000578315 SERPINA1P01009 418 aa11.13□□□□□ -0.63
UPF3AP2-202ENST00000578315 H1F0P07305 194 aaKnown RBP11.13□□□□□ -0.63
UPF3AP2-202ENST00000578315 TROVE2P10155 538 aaKnown RBP eCLIP11.13□□□□□ -0.63
UPF3AP2-202ENST00000578315 GMFBP60983 142 aa11.13□□□□□ -0.63
UPF3AP2-202ENST00000578315 GUCA2AQ02747 115 aa11.13□□□□□ -0.63
UPF3AP2-202ENST00000578315 SEC23BQ15437 767 aa11.13□□□□□ -0.63
UPF3AP2-202ENST00000578315 MICBQ29980 383 aa11.13□□□□□ -0.63
UPF3AP2-202ENST00000578315 RFX4Q33E94 735 aa11.13□□□□□ -0.63
UPF3AP2-202ENST00000578315 NSUN5P1Q3KNT7 163 aa11.13□□□□□ -0.63
UPF3AP2-202ENST00000578315 SLC36A3Q495N2 470 aa11.13□□□□□ -0.63
UPF3AP2-202ENST00000578315 COQ5Q5HYK3 327 aa11.13□□□□□ -0.63
UPF3AP2-202ENST00000578315 METTL21CQ5VZV1 264 aa11.13□□□□□ -0.63
UPF3AP2-202ENST00000578315 SMARCD3Q6STE5 483 aa11.13□□□□□ -0.63
UPF3AP2-202ENST00000578315 CBLL1Q75N03 491 aa11.13□□□□□ -0.63
UPF3AP2-202ENST00000578315 CYP4Z1Q86W10 505 aa11.13□□□□□ -0.63
UPF3AP2-202ENST00000578315 KLHDC1Q8N7A1 406 aa11.13□□□□□ -0.63
UPF3AP2-202ENST00000578315 OR5T2Q8NGG2 359 aa11.13□□□□□ -0.63
UPF3AP2-202ENST00000578315 OR56B2PQ8NGI1 322 aa11.13□□□□□ -0.63
UPF3AP2-202ENST00000578315 OR5R1Q8NH85 324 aa11.13□□□□□ -0.63
UPF3AP2-202ENST00000578315 H1FXQ92522 213 aaKnown RBP11.13□□□□□ -0.63
UPF3AP2-202ENST00000578315 ATP6V1G3Q96LB4 118 aa11.13□□□□□ -0.63
UPF3AP2-202ENST00000578315 GID8Q9NWU2 228 aa11.13□□□□□ -0.63
UPF3AP2-202ENST00000578315 CMTM6Q9NX76 183 aa11.13□□□□□ -0.63
UPF3AP2-202ENST00000578315 MRPL15Q9P015 296 aaKnown RBP11.13□□□□□ -0.63
UPF3AP2-202ENST00000578315 ENPP4Q9Y6X5 453 aa11.13□□□□□ -0.63
UPF3AP2-202ENST00000578315 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.12□□□□□ -0.63
UPF3AP2-202ENST00000578315 TRBV4-1A0A0J9YWV2 114 aa11.12□□□□□ -0.63
UPF3AP2-202ENST00000578315 BBIP1A8MTZ0 92 aa11.12□□□□□ -0.63
UPF3AP2-202ENST00000578315 ACOT8O14734 319 aa11.12□□□□□ -0.63
UPF3AP2-202ENST00000578315 GSTA4O15217 222 aa11.12□□□□□ -0.63
UPF3AP2-202ENST00000578315 NDUFB3O43676 98 aa11.12□□□□□ -0.63
UPF3AP2-202ENST00000578315 EDF1O60869 148 aaKnown RBP11.12□□□□□ -0.63
UPF3AP2-202ENST00000578315 TFF1P04155 84 aa11.12□□□□□ -0.63
UPF3AP2-202ENST00000578315 VSIG10L2P0DP72 767 aa11.12□□□□□ -0.63
UPF3AP2-202ENST00000578315 SLC2A1P11166 492 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms