RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 FOLR3P41439 243 aa9.34□□□□□ -0.91
PTPRM-205ENST00000577827 SNRPEP62304 92 aaKnown RBP9.34□□□□□ -0.91
PTPRM-205ENST00000577827 DCDP81605 110 aaKnown RBP9.34□□□□□ -0.91
PTPRM-205ENST00000577827 DHODHQ02127 395 aa9.34□□□□□ -0.91
PTPRM-205ENST00000577827 VN1R4Q7Z5H5 301 aa9.34□□□□□ -0.91
PTPRM-205ENST00000577827 STT3BQ8TCJ2 826 aa9.34□□□□□ -0.91
PTPRM-205ENST00000577827 LIN37Q96GY3 246 aaPredicted RBP9.34□□□□□ -0.91
PTPRM-205ENST00000577827 SHARPINQ9H0F6 387 aa9.34□□□□□ -0.91
PTPRM-205ENST00000577827 CRHP06850 196 aa9.34□□□□□ -0.91
PTPRM-205ENST00000577827 CISD3P0C7P0 127 aa9.34□□□□□ -0.91
PTPRM-205ENST00000577827 SLC25A4P12235 298 aa9.34□□□□□ -0.91
PTPRM-205ENST00000577827 HIST1H1DP16402 221 aaKnown RBP9.34□□□□□ -0.91
PTPRM-205ENST00000577827 THBS4P35443 961 aa9.34□□□□□ -0.91
PTPRM-205ENST00000577827 PIGPP57054 158 aa9.34□□□□□ -0.91
PTPRM-205ENST00000577827 MZT1Q08AG7 82 aa9.34□□□□□ -0.91
PTPRM-205ENST00000577827 CST9LP1Q5W188 147 aa9.34□□□□□ -0.91
PTPRM-205ENST00000577827 NPEPL1Q8NDH3 523 aa9.34□□□□□ -0.91
PTPRM-205ENST00000577827 OR4N2Q8NGD1 307 aa9.34□□□□□ -0.91
PTPRM-205ENST00000577827 OR6S1Q8NH40 331 aa9.34□□□□□ -0.91
PTPRM-205ENST00000577827 NAT6Q93015 286 aa9.34□□□□□ -0.91
PTPRM-205ENST00000577827 KTI12Q96EK9 354 aaPredicted RBP9.34□□□□□ -0.91
PTPRM-205ENST00000577827 MRGPRX4Q96LA9 322 aa9.34□□□□□ -0.91
PTPRM-205ENST00000577827 RBBP6Q7Z6E9 1792 aaKnown RBP9.34□□□□□ -0.91
PTPRM-205ENST00000577827 ARID2Q68CP9 1835 aa9.34□□□□□ -0.92
PTPRM-205ENST00000577827 ZNF98A6NK75 572 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 CCDC85CA6NKD9 419 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 IDSB3KWA1 339 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 MRPL33O75394 65 aaKnown RBP9.33□□□□□ -0.92
PTPRM-205ENST00000577827 CLDN1O95832 211 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 C1QCP02747 245 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 QDPRP09417 244 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 NME1P15531 152 aaKnown RBP9.33□□□□□ -0.92
PTPRM-205ENST00000577827 NQO2P16083 231 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 PPIAP62937 165 aaKnown RBP9.33□□□□□ -0.92
PTPRM-205ENST00000577827 HTRA4P83105 476 aaPredicted RBP9.33□□□□□ -0.92
PTPRM-205ENST00000577827 TMEM215Q68D42 235 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 LHFPL2Q6ZUX7 228 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 OR4C3Q8NH37 302 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 ELSPBP1Q96BH3 223 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 PIGQQ9BRB3 760 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 HINT2Q9BX68 163 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 MYOTQ9UBF9 498 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 ICAM5Q9UMF0 924 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 ZNFX1Q9P2E3 1918 aaKnown RBP9.33□□□□□ -0.92
PTPRM-205ENST00000577827 M0R135 149 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 GPR31O00270 319 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 TGFBR3Q03167 851 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 GGTLC2Q14390 218 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 SURF2Q15527 256 aaPredicted RBP9.33□□□□□ -0.92
PTPRM-205ENST00000577827 HAGHQ16775 308 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 OR52W1Q6IF63 320 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 CPEB2Q7Z5Q1 589 aaKnown RBP9.33□□□□□ -0.92
PTPRM-205ENST00000577827 ZNF799Q96GE5 643 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 OXGR1Q96P68 337 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 NPAS1Q99742 590 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 CABLES2Q9BTV7 478 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 SLC35B3Q9H1N7 401 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 PTRH2Q9Y3E5 179 aaKnown RBP9.33□□□□□ -0.92
PTPRM-205ENST00000577827 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.33□□□□□ -0.92
PTPRM-205ENST00000577827 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.33□□□□□ -0.92
PTPRM-205ENST00000577827 OR4C45A6NMZ5 311 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 ALOX12BO75342 701 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 CAPZBP47756 277 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 HNF4GQ14541 408 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 ABHD17BQ5VST6 288 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 FBXO46Q6PJ61 603 aaPredicted RBP9.33□□□□□ -0.92
PTPRM-205ENST00000577827 SLC25A42Q86VD7 318 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 ZNF611Q8N823 705 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 OR14J1Q9UGF5 321 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 TRAPPC2LQ9UL33 140 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 ZNF727A8MUV8 499 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 SCRG1O75711 98 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 METAP1P53582 386 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 MIDNQ504T8 468 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 TMEM268Q5VZI3 342 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 LHX8Q68G74 356 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 CDC20BQ86Y33 519 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 ZNF610Q8N9Z0 462 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 ZNF75AQ96N20 296 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 SPACA5Q96QH8 159 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 PLK3Q9H4B4 646 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 ZFP64Q9NPA5 681 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 CD207Q9UJ71 328 aa9.33□□□□□ -0.92
PTPRM-205ENST00000577827 TRAV20A0A0B4J274 112 aa9.32□□□□□ -0.92
PTPRM-205ENST00000577827 H0Y8X5 98 aa9.32□□□□□ -0.92
PTPRM-205ENST00000577827 ENPP1P22413 925 aa9.32□□□□□ -0.92
PTPRM-205ENST00000577827 NAAAQ02083 359 aa9.32□□□□□ -0.92
PTPRM-205ENST00000577827 FABP9Q0Z7S8 132 aa9.32□□□□□ -0.92
PTPRM-205ENST00000577827 FZD2Q14332 565 aa9.32□□□□□ -0.92
PTPRM-205ENST00000577827 MLF2Q15773 248 aaPredicted RBP9.32□□□□□ -0.92
PTPRM-205ENST00000577827 SDSLQ96GA7 329 aa9.32□□□□□ -0.92
PTPRM-205ENST00000577827 MFRPQ9BY79 579 aa9.32□□□□□ -0.92
PTPRM-205ENST00000577827 PATZ1Q9HBE1 687 aaKnown RBP9.32□□□□□ -0.92
PTPRM-205ENST00000577827 TBX21Q9UL17 535 aa9.32□□□□□ -0.92
PTPRM-205ENST00000577827 NSG1A0A0A6YYJ2 146 aa9.32□□□□□ -0.92
PTPRM-205ENST00000577827 LINC01553A4QN01 128 aa9.32□□□□□ -0.92
PTPRM-205ENST00000577827 CYB5BO43169 146 aa9.32□□□□□ -0.92
PTPRM-205ENST00000577827 SCAF4O95104 1147 aaKnown RBP9.32□□□□□ -0.92
PTPRM-205ENST00000577827 HOXC4P09017 264 aaPredicted RBP9.32□□□□□ -0.92
PTPRM-205ENST00000577827 ICAM2P13598 275 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms