RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 IGFL3Q6UXB1 125 aa1.6□□□□□ -2.15
COPS3-213ENST00000577210 WDR82Q6UXN9 313 aa1.6□□□□□ -2.15
COPS3-213ENST00000577210 FBXW12Q6X9E4 464 aa1.6□□□□□ -2.15
COPS3-213ENST00000577210 RAB43Q86YS6 212 aa1.6□□□□□ -2.15
COPS3-213ENST00000577210 PRSS58Q8IYP2 241 aa1.6□□□□□ -2.15
COPS3-213ENST00000577210 ST13P4Q8IZP2 240 aaPredicted RBP1.6□□□□□ -2.15
COPS3-213ENST00000577210 OR11H7Q8NGC8 314 aa1.6□□□□□ -2.15
COPS3-213ENST00000577210 OR6K6Q8NGW6 343 aa1.6□□□□□ -2.15
COPS3-213ENST00000577210 OR6N2Q8NGY6 317 aa1.6□□□□□ -2.15
COPS3-213ENST00000577210 OR8U1Q8NH10 309 aa1.6□□□□□ -2.15
COPS3-213ENST00000577210 OR51A7Q8NH64 312 aa1.6□□□□□ -2.15
COPS3-213ENST00000577210 OR4S2Q8NH73 311 aa1.6□□□□□ -2.15
COPS3-213ENST00000577210 SEH1LQ96EE3 360 aa1.6□□□□□ -2.15
COPS3-213ENST00000577210 SGTBQ96EQ0 304 aa1.6□□□□□ -2.15
COPS3-213ENST00000577210 ATP6V1G3Q96LB4 118 aa1.6□□□□□ -2.15
COPS3-213ENST00000577210 BMFQ96LC9 184 aa1.6□□□□□ -2.15
COPS3-213ENST00000577210 GLT1D1Q96MS3 346 aa1.6□□□□□ -2.15
COPS3-213ENST00000577210 GPR21Q99679 349 aa1.6□□□□□ -2.15
COPS3-213ENST00000577210 AGMATQ9BSE5 352 aa1.6□□□□□ -2.15
COPS3-213ENST00000577210 OSBPL11Q9BXB4 747 aa1.6□□□□□ -2.15
COPS3-213ENST00000577210 RAB1BQ9H0U4 201 aa1.6□□□□□ -2.15
COPS3-213ENST00000577210 REEP1Q9H902 201 aa1.6□□□□□ -2.15
COPS3-213ENST00000577210 WFDC1Q9HC57 220 aa1.6□□□□□ -2.15
COPS3-213ENST00000577210 MYOZ1Q9NP98 299 aaPredicted RBP1.6□□□□□ -2.15
COPS3-213ENST00000577210 STMN3Q9NZ72 180 aa1.6□□□□□ -2.15
COPS3-213ENST00000577210 CHMP5Q9NZZ3 219 aa1.6□□□□□ -2.15
COPS3-213ENST00000577210 CTSFQ9UBX1 484 aa1.6□□□□□ -2.15
COPS3-213ENST00000577210 CLEC2DQ9UHP7 191 aa1.6□□□□□ -2.15
COPS3-213ENST00000577210 RAI1Q7Z5J4 1906 aaPredicted RBP1.6□□□□□ -2.15
COPS3-213ENST00000577210 FHOD3Q2V2M9 1422 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 AQRO60306 1485 aaKnown RBP eCLIP1.59□□□□□ -2.15
COPS3-213ENST00000577210 TRAV8-7A0A075B6U6 113 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 GOLGA8QA0A0J9YX86 632 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 B4GALT5O43286 388 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 SLC16A7O60669 478 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 NDUFS6O75380 124 aaKnown RBP1.59□□□□□ -2.15
COPS3-213ENST00000577210 TRAPPC6AO75865 159 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 RHOCP08134 193 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 CD3GP09693 182 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 LIPCP11150 499 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 IGFBP3P17936 291 aaPredicted RBP1.59□□□□□ -2.15
COPS3-213ENST00000577210 RAB3AP20336 220 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 CD9P21926 228 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 IL12BP29460 328 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 ARL2P36404 184 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 MYCNOSP40205 109 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 RBM34P42696 430 aaKnown RBP1.59□□□□□ -2.15
COPS3-213ENST00000577210 HCAR3P49019 387 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 FABP6P51161 128 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 NDUFA8P51970 172 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 ZNF136P52737 540 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 UBE2NP61088 152 aaKnown RBP1.59□□□□□ -2.15
COPS3-213ENST00000577210 RPL31P62899 125 aaKnown RBP1.59□□□□□ -2.15
COPS3-213ENST00000577210 CYP24A1Q07973 514 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 MAD2L1BPQ15013 274 aaPredicted RBP1.59□□□□□ -2.15
COPS3-213ENST00000577210 QPRTQ15274 297 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 TNXAQ16473 311 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 DEFB116Q30KQ4 102 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 C18orf21Q32NC0 220 aaPredicted RBP1.59□□□□□ -2.15
COPS3-213ENST00000577210 FBXW9Q5XUX1 488 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 OR2T5Q6IEZ7 315 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 NANOGP8Q6NSW7 305 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 APOBEC3HQ6NTF7 200 aaKnown RBP1.59□□□□□ -2.15
COPS3-213ENST00000577210 LYPD2Q6UXB3 125 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 SELENOHQ8IZQ5 122 aaKnown RBP1.59□□□□□ -2.15
COPS3-213ENST00000577210 COX18Q8N8Q8 333 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 C11orf72Q8NBR9 251 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 OR2T29Q8NH02 315 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 RGP1Q92546 391 aaPredicted RBP1.59□□□□□ -2.15
COPS3-213ENST00000577210 CDKL2Q92772 493 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 RNF157Q96PX1 679 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 TIMM17AQ99595 171 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 NDFIP1Q9BT67 221 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 COPS4Q9BT78 406 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 PLA2G2FQ9BZM2 168 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 NDEL1Q9GZM8 345 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 RPP21Q9H633 154 aaKnown RBP1.59□□□□□ -2.15
COPS3-213ENST00000577210 TMEM27Q9HBJ8 222 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 HMG20AQ9NP66 347 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 RGS18Q9NS28 235 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 TMEM100Q9NV29 134 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 ZNHIT6Q9NWK9 470 aaKnown RBP1.59□□□□□ -2.15
COPS3-213ENST00000577210 RBAKQ9NYW8 714 aaPredicted RBP1.59□□□□□ -2.15
COPS3-213ENST00000577210 CES1P1Q9UKY3 287 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 TMEM14AQ9Y6G1 99 aa1.59□□□□□ -2.15
COPS3-213ENST00000577210 PHF3Q92576 2039 aaKnown RBP1.59□□□□□ -2.16
COPS3-213ENST00000577210 ZNF646O15015 1829 aaPredicted RBP1.59□□□□□ -2.16
COPS3-213ENST00000577210 TMEM94Q12767 1356 aa1.59□□□□□ -2.16
COPS3-213ENST00000577210 LRRK1Q38SD2 2015 aa1.58□□□□□ -2.16
COPS3-213ENST00000577210 GPATCH8Q9UKJ3 1502 aaKnown RBP1.58□□□□□ -2.16
COPS3-213ENST00000577210 IGLV1-50A0A075B6I6 118 aa1.58□□□□□ -2.16
COPS3-213ENST00000577210 IGHV3-74A0A0B4J1X5 117 aa1.58□□□□□ -2.16
COPS3-213ENST00000577210 IGHV5-51A0A0C4DH38 117 aa1.58□□□□□ -2.16
COPS3-213ENST00000577210 IGKV1-8A0A0C4DH67 115 aa1.58□□□□□ -2.16
COPS3-213ENST00000577210 A0A0J9YXV3 536 aa1.58□□□□□ -2.16
COPS3-213ENST00000577210 MGAT4DA6NG13 374 aa1.58□□□□□ -2.16
COPS3-213ENST00000577210 TRPC5OSA6NMA1 111 aa1.58□□□□□ -2.16
COPS3-213ENST00000577210 IQCF5A8MTL0 148 aa1.58□□□□□ -2.16
COPS3-213ENST00000577210 INS-IGF2F8WCM5 200 aa1.58□□□□□ -2.16
COPS3-213ENST00000577210 H7C2Y5 167 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms