RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 OR4C45A6NMZ5 311 aa16.07■□□□□ 0.16
ATPAF1-214ENST00000576409 CDK2AP1O14519 115 aa16.07■□□□□ 0.16
ATPAF1-214ENST00000576409 RER1O15258 196 aa16.07■□□□□ 0.16
ATPAF1-214ENST00000576409 OR5H8P0DN80 308 aa16.07■□□□□ 0.16
ATPAF1-214ENST00000576409 ZNF121P58317 390 aaPredicted RBP16.07■□□□□ 0.16
ATPAF1-214ENST00000576409 EMC4Q5J8M3 183 aa16.07■□□□□ 0.16
ATPAF1-214ENST00000576409 ATPAF1Q5TC12 328 aaPredicted RBP16.07■□□□□ 0.16
ATPAF1-214ENST00000576409 CD200R1LQ6Q8B3 271 aa16.07■□□□□ 0.16
ATPAF1-214ENST00000576409 DGAT2L6Q6ZPD8 337 aa16.07■□□□□ 0.16
ATPAF1-214ENST00000576409 TMPPEQ6ZT21 453 aa16.07■□□□□ 0.16
ATPAF1-214ENST00000576409 NT5CQ8TCD5 201 aa16.07■□□□□ 0.16
ATPAF1-214ENST00000576409 MRPL38Q96DV4 380 aaKnown RBP16.07■□□□□ 0.16
ATPAF1-214ENST00000576409 CES1P1Q9UKY3 287 aa16.07■□□□□ 0.16
ATPAF1-214ENST00000576409 PCDHGA9Q9Y5G4 932 aaKnown RBP16.07■□□□□ 0.16
ATPAF1-214ENST00000576409 GREB1Q4ZG55 1949 aa16.07■□□□□ 0.16
ATPAF1-214ENST00000576409 ST8SIA3O43173 380 aa16.06■□□□□ 0.16
ATPAF1-214ENST00000576409 EIF4E2O60573 245 aaKnown RBP16.06■□□□□ 0.16
ATPAF1-214ENST00000576409 CD37P11049 281 aa16.06■□□□□ 0.16
ATPAF1-214ENST00000576409 IL10RAQ13651 578 aa16.06■□□□□ 0.16
ATPAF1-214ENST00000576409 LCN15Q6UWW0 184 aa16.06■□□□□ 0.16
ATPAF1-214ENST00000576409 PGAP1Q75T13 922 aa16.06■□□□□ 0.16
ATPAF1-214ENST00000576409 RTL10Q7L3V2 364 aa16.06■□□□□ 0.16
ATPAF1-214ENST00000576409 ZNF707Q96C28 371 aaPredicted RBP16.06■□□□□ 0.16
ATPAF1-214ENST00000576409 RBMXL1Q96E39 390 aaKnown RBP16.06■□□□□ 0.16
ATPAF1-214ENST00000576409 NIPSNAP3BQ9BS92 247 aa16.06■□□□□ 0.16
ATPAF1-214ENST00000576409 RSRP1Q9BUV0 290 aa16.06■□□□□ 0.16
ATPAF1-214ENST00000576409 LAT2Q9GZY6 243 aa16.06■□□□□ 0.16
ATPAF1-214ENST00000576409 ARHGEF17Q96PE2 2063 aaPredicted RBP16.06■□□□□ 0.16
ATPAF1-214ENST00000576409 PCNTO95613 3336 aa16.06■□□□□ 0.16
ATPAF1-214ENST00000576409 OR2C1O95371 312 aa16.06■□□□□ 0.16
ATPAF1-214ENST00000576409 TMEM229BQ8NBD8 167 aa16.06■□□□□ 0.16
ATPAF1-214ENST00000576409 TCEAL7Q9BRU2 100 aa16.06■□□□□ 0.16
ATPAF1-214ENST00000576409 CNTD2Q9H8S5 307 aa16.06■□□□□ 0.16
ATPAF1-214ENST00000576409 A0A087WZY1 265 aa16.06■□□□□ 0.16
ATPAF1-214ENST00000576409 RNASEK-C17orf49H0YIS7 233 aa16.06■□□□□ 0.16
ATPAF1-214ENST00000576409 CST7O76096 145 aa16.06■□□□□ 0.16
ATPAF1-214ENST00000576409 PEBP1P30086 187 aaKnown RBP16.06■□□□□ 0.16
ATPAF1-214ENST00000576409 Q6ZS52 159 aa16.06■□□□□ 0.16
ATPAF1-214ENST00000576409 AAED1Q7RTV5 226 aa16.06■□□□□ 0.16
ATPAF1-214ENST00000576409 LRFN5Q96NI6 719 aa16.06■□□□□ 0.16
ATPAF1-214ENST00000576409 TUBG2Q9NRH3 451 aa16.06■□□□□ 0.16
ATPAF1-214ENST00000576409 GDF2Q9UK05 429 aaPredicted RBP16.06■□□□□ 0.16
ATPAF1-214ENST00000576409 SRPK3Q9UPE1 567 aa16.06■□□□□ 0.16
ATPAF1-214ENST00000576409 TMEM184BQ9Y519 407 aaPredicted RBP16.06■□□□□ 0.16
ATPAF1-214ENST00000576409 FAM74A7A6NL05 159 aa16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 RPS4XP62701 263 aaKnown RBP16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 CNN3Q15417 329 aaKnown RBP16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 FAM74A3Q4VXF1 159 aa16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 TMEM128Q5BJH2 165 aa16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 FAM109BQ6ICB4 259 aaPredicted RBP16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 ZNF321PQ8N8H1 164 aa16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 ZMIZ1Q9ULJ6 1067 aa16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 FOLR1P15328 257 aa16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 DUSP1P28562 367 aa16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 NR2C2APQ86WQ0 139 aa16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 PPP1R3BQ86XI6 285 aa16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 NAXDQ8IW45 347 aa16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 FAM24BQ8N5W8 94 aa16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 OR13C8Q8NGS7 320 aa16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 HPSE2Q8WWQ2 592 aa16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 S1PR5Q9H228 398 aa16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 NKAIN1Q4KMZ8 207 aa16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 OR56B2PQ8NGI1 322 aa16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 LHFPL5Q8TAF8 219 aa16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 UBALD1Q8TB05 177 aa16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 THSD7AQ9UPZ6 1657 aa16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 C9orf170A2RU37 121 aa16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 TUBAL3A6NHL2 446 aa16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 HSD17B6O14756 317 aa16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 PPP1R2P9O14990 202 aa16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 SFTA3P0C7M3 94 aa16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 ELLP55199 621 aaPredicted RBP16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 PIGPP57054 158 aa16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 FOXF1Q12946 379 aa16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 MESTQ5EB52 335 aa16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 AADACL3Q5VUY0 350 aa16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 RPL7L1Q6DKI1 246 aaKnown RBP16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 FBXO17Q96EF6 278 aa16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 KCNE5Q9UJ90 142 aa16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 KPTNQ9Y664 436 aa16.05■□□□□ 0.16
ATPAF1-214ENST00000576409 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.04■□□□□ 0.16
ATPAF1-214ENST00000576409 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.04■□□□□ 0.16
ATPAF1-214ENST00000576409 SPRY1O43609 319 aaPredicted RBP16.04■□□□□ 0.16
ATPAF1-214ENST00000576409 JTBO76095 146 aa16.04■□□□□ 0.16
ATPAF1-214ENST00000576409 COL9A1P20849 921 aa16.04■□□□□ 0.16
ATPAF1-214ENST00000576409 RXFP4Q8TDU9 374 aa16.04■□□□□ 0.16
ATPAF1-214ENST00000576409 ARL5BQ96KC2 179 aa16.04■□□□□ 0.16
ATPAF1-214ENST00000576409 PGLYRP3Q96LB9 341 aa16.04■□□□□ 0.16
ATPAF1-214ENST00000576409 HAO2Q9NYQ3 351 aa16.04■□□□□ 0.16
ATPAF1-214ENST00000576409 MMACHCQ9Y4U1 282 aa16.04■□□□□ 0.16
ATPAF1-214ENST00000576409 PIN1P1O15428 100 aa16.04■□□□□ 0.16
ATPAF1-214ENST00000576409 B3GALNT1O75752 331 aa16.04■□□□□ 0.16
ATPAF1-214ENST00000576409 AQP8O94778 261 aa16.04■□□□□ 0.16
ATPAF1-214ENST00000576409 H2AFB1P0C5Y9 115 aa16.04■□□□□ 0.16
ATPAF1-214ENST00000576409 HOXB9P17482 250 aaPredicted RBP16.04■□□□□ 0.16
ATPAF1-214ENST00000576409 KCNJ3P48549 501 aa16.04■□□□□ 0.16
ATPAF1-214ENST00000576409 RTN4IP1Q8WWV3 396 aaPredicted RBP16.04■□□□□ 0.16
ATPAF1-214ENST00000576409 LIPHQ8WWY8 451 aa16.04■□□□□ 0.16
ATPAF1-214ENST00000576409 PSMF1Q92530 271 aa16.04■□□□□ 0.16
ATPAF1-214ENST00000576409 C2orf50Q96LR7 162 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms