RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 IGFBPL1Q8WX77 278 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 GATAD2BQ8WXI9 593 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 SPSB4Q96A44 273 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 PELI1Q96FA3 418 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 REEP6Q96HR9 211 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 LYZL4Q96KX0 146 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 MYCBPQ99417 103 aaPredicted RBP7.33□□□□□ -1.24
NUP88-211ENST00000575976 SOX7Q9BT81 388 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 REPIN1Q9BWE0 567 aaKnown RBP7.33□□□□□ -1.24
NUP88-211ENST00000575976 YTHDF1Q9BYJ9 559 aaKnown RBP7.33□□□□□ -1.24
NUP88-211ENST00000575976 G6PC2Q9NQR9 355 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 FRRS1LQ9P0K9 344 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 TAAR3PQ9P1P4 343 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 NUFIP1Q9UHK0 495 aaKnown RBP7.33□□□□□ -1.24
NUP88-211ENST00000575976 ST6GALNAC2Q9UJ37 374 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 PURGQ9UJV8 347 aaKnown RBP7.33□□□□□ -1.24
NUP88-211ENST00000575976 PLEKHA6Q9Y2H5 1048 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 SNX5Q9Y5X3 404 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 A0A0U1RQV5 110 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 hCG_38984A0A1B0GV85 526 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 GGT3PA6NGU5 568 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 IQCF6A8MYZ5 107 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 OVOL3O00110 214 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 MYL12BO14950 172 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 RGS10O43665 173 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 TIMM8AO60220 97 aaPredicted RBP7.32□□□□□ -1.24
NUP88-211ENST00000575976 LALBAP00709 142 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 IGLV3-1P01715 115 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 MT-ND5P03915 603 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 RAF1P04049 648 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 HTR1AP08908 422 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 KITLGP21583 273 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 EEF1B2P24534 225 aaKnown RBP7.32□□□□□ -1.24
NUP88-211ENST00000575976 ALDH3B1P43353 468 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 KIR3DL2P43630 455 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 GTF2A1P52655 376 aaPredicted RBP7.32□□□□□ -1.24
NUP88-211ENST00000575976 GBX2P52951 348 aaPredicted RBP7.32□□□□□ -1.24
NUP88-211ENST00000575976 NANOS3P60323 173 aaKnown RBP7.32□□□□□ -1.24
NUP88-211ENST00000575976 SNRPD2P62316 118 aaKnown RBP7.32□□□□□ -1.24
NUP88-211ENST00000575976 FAM3AP98173 230 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 ALKBH1Q13686 389 aaKnown RBP7.32□□□□□ -1.24
NUP88-211ENST00000575976 DOC2BQ14184 412 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 IRF3Q14653 427 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 BCL2L15Q5TBC7 163 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 RNLSQ5VYX0 342 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 XAF1Q6GPH4 301 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 FDX2Q6P4F2 183 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 KLBQ86Z14 1044 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 EGFL6Q8IUX8 553 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 ELMOD2Q8IZ81 293 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 ZCCHC24Q8N2G6 241 aaKnown RBP7.32□□□□□ -1.24
NUP88-211ENST00000575976 OR2G2Q8NGZ5 317 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 OR51E1Q8TCB6 317 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 GTF3AQ92664 365 aaKnown RBP7.32□□□□□ -1.24
NUP88-211ENST00000575976 CCL19Q99731 98 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 CDCA4Q9BXL8 241 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 CACNG6Q9BXT2 260 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 CCDC90BQ9GZT6 254 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 MOB1AQ9H8S9 216 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 GPR84Q9NQS5 396 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 BABAM2Q9NXR7 383 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 BLOC1S6Q9UL45 172 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 ERGIC3Q9Y282 383 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 ABCA4P78363 2273 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 CCDC168Q8NDH2 2452 aa7.32□□□□□ -1.24
NUP88-211ENST00000575976 A0A1B0GTI1 187 aa7.31□□□□□ -1.24
NUP88-211ENST00000575976 CD300LBA8K4G0 201 aa7.31□□□□□ -1.24
NUP88-211ENST00000575976 H3BSH0 61 aa7.31□□□□□ -1.24
NUP88-211ENST00000575976 M0R233 179 aa7.31□□□□□ -1.24
NUP88-211ENST00000575976 P2RY10O00398 339 aa7.31□□□□□ -1.24
NUP88-211ENST00000575976 LILRA1O75019 489 aa7.31□□□□□ -1.24
NUP88-211ENST00000575976 NAT2P11245 290 aa7.31□□□□□ -1.24
NUP88-211ENST00000575976 SELEP16581 610 aa7.31□□□□□ -1.24
NUP88-211ENST00000575976 CFL1P23528 166 aaKnown RBP7.31□□□□□ -1.24
NUP88-211ENST00000575976 DNASE1P24855 282 aa7.31□□□□□ -1.24
NUP88-211ENST00000575976 CDKN1AP38936 164 aa7.31□□□□□ -1.24
NUP88-211ENST00000575976 MAP2K4P45985 399 aa7.31□□□□□ -1.24
NUP88-211ENST00000575976 TGM4P49221 684 aa7.31□□□□□ -1.24
NUP88-211ENST00000575976 GSK3AP49840 483 aa7.31□□□□□ -1.24
NUP88-211ENST00000575976 MMP15P51511 669 aa7.31□□□□□ -1.24
NUP88-211ENST00000575976 CDH15P55291 814 aa7.31□□□□□ -1.24
NUP88-211ENST00000575976 WNT4P56705 351 aa7.31□□□□□ -1.24
NUP88-211ENST00000575976 GABARAPL2P60520 117 aa7.31□□□□□ -1.24
NUP88-211ENST00000575976 MRPL28Q13084 256 aaKnown RBP7.31□□□□□ -1.24
NUP88-211ENST00000575976 TNK1Q13470 666 aa7.31□□□□□ -1.24
NUP88-211ENST00000575976 MOGQ16653 247 aa7.31□□□□□ -1.24
NUP88-211ENST00000575976 NKPD1Q17RQ9 610 aa7.31□□□□□ -1.24
NUP88-211ENST00000575976 ODF4Q2M2E3 257 aa7.31□□□□□ -1.24
NUP88-211ENST00000575976 PRSS48Q7RTY5 328 aa7.31□□□□□ -1.24
NUP88-211ENST00000575976 COMMD2Q86X83 199 aa7.31□□□□□ -1.24
NUP88-211ENST00000575976 RDH10Q8IZV5 341 aa7.31□□□□□ -1.24
NUP88-211ENST00000575976 BHLHE23Q8NDY6 225 aa7.31□□□□□ -1.24
NUP88-211ENST00000575976 OR8G5Q8NG78 346 aa7.31□□□□□ -1.24
NUP88-211ENST00000575976 OR56B2PQ8NGI1 322 aa7.31□□□□□ -1.24
NUP88-211ENST00000575976 PIGTQ969N2 578 aa7.31□□□□□ -1.24
NUP88-211ENST00000575976 FAM71F1Q96KD3 344 aaPredicted RBP7.31□□□□□ -1.24
NUP88-211ENST00000575976 OR5M11Q96RB7 305 aa7.31□□□□□ -1.24
NUP88-211ENST00000575976 VRK1Q99986 396 aaPredicted RBP7.31□□□□□ -1.24
NUP88-211ENST00000575976 TPK1Q9H3S4 243 aa7.31□□□□□ -1.24
NUP88-211ENST00000575976 RGCCQ9H4X1 137 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms