RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 SF3B6Q9Y3B4 125 aaKnown RBP7.37□□□□□ -1.23
SMG6-218ENST00000575454 NOTCH3Q9UM47 2321 aa7.36□□□□□ -1.23
SMG6-218ENST00000575454 A0A087WUU8 490 aa7.36□□□□□ -1.23
SMG6-218ENST00000575454 H3BUX3 64 aa7.36□□□□□ -1.23
SMG6-218ENST00000575454 M0R1W7 72 aa7.36□□□□□ -1.23
SMG6-218ENST00000575454 BHLHE40O14503 412 aa7.36□□□□□ -1.23
SMG6-218ENST00000575454 CDC42EP2O14613 210 aa7.36□□□□□ -1.23
SMG6-218ENST00000575454 FBXO24O75426 580 aa7.36□□□□□ -1.23
SMG6-218ENST00000575454 TXNDC12O95881 172 aa7.36□□□□□ -1.23
SMG6-218ENST00000575454 VSIG8P0DPA2 414 aa7.36□□□□□ -1.23
SMG6-218ENST00000575454 DDOSTP39656 456 aa7.36□□□□□ -1.23
SMG6-218ENST00000575454 DBPQ10586 325 aaPredicted RBP7.36□□□□□ -1.23
SMG6-218ENST00000575454 NSUN5P1Q3KNT7 163 aa7.36□□□□□ -1.23
SMG6-218ENST00000575454 LRRC23Q53EV4 343 aaPredicted RBP7.36□□□□□ -1.23
SMG6-218ENST00000575454 OTPQ5XKR4 325 aa7.36□□□□□ -1.23
SMG6-218ENST00000575454 SLC18B1Q6NT16 456 aa7.36□□□□□ -1.23
SMG6-218ENST00000575454 CORO6Q6QEF8 472 aa7.36□□□□□ -1.23
SMG6-218ENST00000575454 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.36□□□□□ -1.23
SMG6-218ENST00000575454 NDUFA11Q86Y39 141 aa7.36□□□□□ -1.23
SMG6-218ENST00000575454 OR51G2Q8NGK0 314 aa7.36□□□□□ -1.23
SMG6-218ENST00000575454 OR5D13Q8NGL4 314 aa7.36□□□□□ -1.23
SMG6-218ENST00000575454 C8orf46Q8TAG6 207 aa7.36□□□□□ -1.23
SMG6-218ENST00000575454 PPP1R35Q8TAP8 253 aa7.36□□□□□ -1.23
SMG6-218ENST00000575454 SLC7A13Q8TCU3 470 aa7.36□□□□□ -1.23
SMG6-218ENST00000575454 PHF21AQ96BD5 680 aa7.36□□□□□ -1.23
SMG6-218ENST00000575454 R3HDM4Q96D70 268 aa7.36□□□□□ -1.23
SMG6-218ENST00000575454 CCL13Q99616 98 aa7.36□□□□□ -1.23
SMG6-218ENST00000575454 SSX3Q99909 188 aa7.36□□□□□ -1.23
SMG6-218ENST00000575454 DCTN5Q9BTE1 182 aa7.36□□□□□ -1.23
SMG6-218ENST00000575454 DNTTIP1Q9H147 329 aa7.36□□□□□ -1.23
SMG6-218ENST00000575454 KRCC1Q9NPI7 259 aaPredicted RBP7.36□□□□□ -1.23
SMG6-218ENST00000575454 RHCGQ9UBD6 479 aa7.36□□□□□ -1.23
SMG6-218ENST00000575454 KCNG2Q9UJ96 466 aa7.36□□□□□ -1.23
SMG6-218ENST00000575454 A0A1W2PRD5 423 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 A0A1W2PRF3 423 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 A0A1W2PRM7 423 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 ANKRD30BLA7E2S9 258 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 M0R135 149 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 SOCS2O14508 198 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 PTP4A3O75365 173 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 TIPRLO75663 272 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 MPIG6BO95866 241 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 ZNF26P17031 533 aaPredicted RBP7.35□□□□□ -1.23
SMG6-218ENST00000575454 GPR4P46093 362 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 YAP1P46937 504 aaKnown RBP7.35□□□□□ -1.23
SMG6-218ENST00000575454 PRSS12P56730 875 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 HOXA4Q00056 320 aaPredicted RBP7.35□□□□□ -1.23
SMG6-218ENST00000575454 ZNF92Q03936 586 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 POU4F2Q12837 409 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 MEP1BQ16820 701 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 PCK2Q16822 640 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 LRRC75BQ2VPJ9 315 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 RABL3Q5HYI8 236 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 COQ5Q5HYK3 327 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 WDR38Q5JTN6 314 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 ATPAF1Q5TC12 328 aaPredicted RBP7.35□□□□□ -1.23
SMG6-218ENST00000575454 FOXB2Q5VYV0 432 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 METTL21CQ5VZV1 264 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 DRAM2Q6UX65 266 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 CYP4Z1Q86W10 505 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 Q8N7P7 452 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 WFDC9Q8NEX5 89 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 OR4C15Q8NGM1 316 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 OR8S1Q8NH09 359 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 TNFRSF14Q92956 283 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 ZBTB9Q96C00 473 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 TLCD1Q96CP7 247 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 ZNF799Q96GE5 643 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 MED30Q96HR3 178 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 WWC2-AS2Q96NR7 200 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 CDCA4Q9BXL8 241 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 MEGF9Q9H1U4 602 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 TOR3AQ9H497 397 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 CYB5R1Q9UHQ9 305 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 B9D1Q9UPM9 204 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 IER3IP1Q9Y5U9 82 aa7.35□□□□□ -1.23
SMG6-218ENST00000575454 IGHV3OR15-7A0A075B7D8 119 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 IGLV1-36A0A0B4J1U3 117 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 NKX6-3A6NJ46 265 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 IMPA2O14732 288 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 FFAR1O14842 300 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 PEX14O75381 377 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 FCN3O75636 299 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 GLCEO94923 617 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 RENP00797 406 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 HLA-DQA2P01906 255 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 CD33P20138 364 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 CDKN2AP42771 156 aaKnown RBP7.34□□□□□ -1.23
SMG6-218ENST00000575454 TGM4P49221 684 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 GSK3BP49841 420 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 IKZF1Q13422 519 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 RFX4Q33E94 735 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 TBPL2Q6SJ96 375 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 CFAP77Q6ZQR2 320 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 ZNF826PQ6ZT77 177 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 PTCHD4Q6ZW05 846 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 DPY19L4Q7Z388 723 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 NAA40Q86UY6 237 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 OR6V1Q8N148 313 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 CYB561A3Q8NBI2 242 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms