RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 KRTAP10-9P60411 292 aa14.64□□□□□ -0.07
NUP88-210ENST00000574867 ALKBH1Q13686 389 aaKnown RBP14.64□□□□□ -0.07
NUP88-210ENST00000574867 SWI5Q1ZZU3 235 aa14.64□□□□□ -0.07
NUP88-210ENST00000574867 LRP11Q86VZ4 500 aa14.64□□□□□ -0.07
NUP88-210ENST00000574867 PRSS35Q8N3Z0 413 aa14.64□□□□□ -0.07
NUP88-210ENST00000574867 SVOPQ8N4V2 548 aa14.64□□□□□ -0.07
NUP88-210ENST00000574867 CCL19Q99731 98 aa14.64□□□□□ -0.07
NUP88-210ENST00000574867 PURGQ9UJV8 347 aaKnown RBP14.64□□□□□ -0.07
NUP88-210ENST00000574867 CELSR2Q9HCU4 2923 aa14.63□□□□□ -0.07
NUP88-210ENST00000574867 hCG_38984A0A1B0GV85 526 aa14.63□□□□□ -0.07
NUP88-210ENST00000574867 TIMM8AO60220 97 aaPredicted RBP14.63□□□□□ -0.07
NUP88-210ENST00000574867 RPSAP08865 295 aaKnown RBP14.63□□□□□ -0.07
NUP88-210ENST00000574867 NANOS3P60323 173 aaKnown RBP14.63□□□□□ -0.07
NUP88-210ENST00000574867 BDH1Q02338 343 aa14.63□□□□□ -0.07
NUP88-210ENST00000574867 MST1LQ2TV78 715 aa14.63□□□□□ -0.07
NUP88-210ENST00000574867 ZMAT1Q5H9K5 638 aa14.63□□□□□ -0.07
NUP88-210ENST00000574867 C11orf71Q6IPW1 123 aa14.63□□□□□ -0.07
NUP88-210ENST00000574867 RPL22L1Q6P5R6 122 aaKnown RBP14.63□□□□□ -0.07
NUP88-210ENST00000574867 COMMD2Q86X83 199 aa14.63□□□□□ -0.07
NUP88-210ENST00000574867 FRRS1LQ9P0K9 344 aa14.63□□□□□ -0.07
NUP88-210ENST00000574867 LAMP3Q9UQV4 416 aa14.63□□□□□ -0.07
NUP88-210ENST00000574867 SLC22A13Q9Y226 551 aa14.63□□□□□ -0.07
NUP88-210ENST00000574867 IQCF6A8MYZ5 107 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 E9PI62 339 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 M0R233 179 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 ATP6V1B1P15313 513 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 LIPAP38571 399 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 DDOSTP39656 456 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 KIR3DL2P43630 455 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 CDK5R1Q15078 307 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 SPHARQ15513 63 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 OR8B8Q15620 311 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 NKPD1Q17RQ9 610 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 ZNF773Q6PK81 442 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 CCDC54Q8NEL0 328 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 OR51E1Q8TCB6 317 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 GPR84Q9NQS5 396 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 CYSLTR2Q9NS75 346 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 TAAR3PQ9P1P4 343 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 MYEF2Q9P2K5 600 aaKnown RBP14.62□□□□□ -0.07
NUP88-210ENST00000574867 LSM2Q9Y333 95 aaKnown RBP14.62□□□□□ -0.07
NUP88-210ENST00000574867 ASH1LQ9NR48 2969 aaKnown RBP14.62□□□□□ -0.07
NUP88-210ENST00000574867 LOC390937A0A1W2PQ73 354 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 GGT3PA6NGU5 568 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 TMEM212A6NML5 194 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 MTRF1O75570 445 aaKnown RBP14.62□□□□□ -0.07
NUP88-210ENST00000574867 CD8AP01732 235 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 RAF1P04049 648 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 CCL1P22362 96 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 FAM3AP98173 230 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 ACSM1Q08AH1 577 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 TMEM244Q5VVB8 128 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 OR2T2Q6IF00 324 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 IGFBPL1Q8WX77 278 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 PPP1R14AQ96A00 147 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 LYZL4Q96KX0 146 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 NR1H4Q96RI1 486 aaPredicted RBP14.62□□□□□ -0.07
NUP88-210ENST00000574867 COMMD4Q9H0A8 199 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 DYNLRB1Q9NP97 96 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 ST6GALNAC2Q9UJ37 374 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 DSCAMO60469 2012 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 FBN2P35556 2912 aa14.62□□□□□ -0.07
NUP88-210ENST00000574867 PLSCR5A0PG75 271 aa14.61□□□□□ -0.07
NUP88-210ENST00000574867 OR4C45A6NMZ5 311 aa14.61□□□□□ -0.07
NUP88-210ENST00000574867 ISG15P05161 165 aa14.61□□□□□ -0.07
NUP88-210ENST00000574867 PPOXP50336 477 aa14.61□□□□□ -0.07
NUP88-210ENST00000574867 MED22Q15528 200 aa14.61□□□□□ -0.07
NUP88-210ENST00000574867 TMEM255AQ5JRV8 349 aa14.61□□□□□ -0.07
NUP88-210ENST00000574867 DOK3Q7L591 496 aa14.61□□□□□ -0.07
NUP88-210ENST00000574867 FTMTQ8N4E7 242 aa14.61□□□□□ -0.07
NUP88-210ENST00000574867 RPS4Y2Q8TD47 263 aa14.61□□□□□ -0.07
NUP88-210ENST00000574867 PIGTQ969N2 578 aa14.61□□□□□ -0.07
NUP88-210ENST00000574867 SMIM19Q96E16 107 aa14.61□□□□□ -0.07
NUP88-210ENST00000574867 ZNF696Q9H7X3 374 aa14.61□□□□□ -0.07
NUP88-210ENST00000574867 PMF1-BGLAPU3KQ54 211 aa14.61□□□□□ -0.07
NUP88-210ENST00000574867 TRBV2A0A0J9YWF9 115 aa14.61□□□□□ -0.07
NUP88-210ENST00000574867 A0A1B0GVI7 797 aa14.61□□□□□ -0.07
NUP88-210ENST00000574867 LOC107986453A0A1B0GWG9 222 aa14.61□□□□□ -0.07
NUP88-210ENST00000574867 DHRS7CA6NNS2 312 aa14.61□□□□□ -0.07
NUP88-210ENST00000574867 CD300LBA8K4G0 201 aa14.61□□□□□ -0.07
NUP88-210ENST00000574867 DHRS3O75911 302 aa14.61□□□□□ -0.07
NUP88-210ENST00000574867 LALBAP00709 142 aa14.61□□□□□ -0.07
NUP88-210ENST00000574867 GSK3AP49840 483 aa14.61□□□□□ -0.07
NUP88-210ENST00000574867 GTF2A1P52655 376 aaPredicted RBP14.61□□□□□ -0.07
NUP88-210ENST00000574867 XAF1Q6GPH4 301 aa14.61□□□□□ -0.07
NUP88-210ENST00000574867 ZNF676Q8N7Q3 588 aa14.61□□□□□ -0.07
NUP88-210ENST00000574867 PLPP7Q8NBV4 271 aa14.61□□□□□ -0.07
NUP88-210ENST00000574867 CSNK2A3Q8NEV1 391 aa14.61□□□□□ -0.07
NUP88-210ENST00000574867 OR56B2PQ8NGI1 322 aa14.61□□□□□ -0.07
NUP88-210ENST00000574867 OR5AK2Q8NH90 309 aa14.61□□□□□ -0.07
NUP88-210ENST00000574867 LURAP1Q96LR2 239 aa14.61□□□□□ -0.07
NUP88-210ENST00000574867 CXorf56Q9H5V9 222 aa14.61□□□□□ -0.07
NUP88-210ENST00000574867 P2RY10O00398 339 aa14.6□□□□□ -0.07
NUP88-210ENST00000574867 OGG1O15527 345 aa14.6□□□□□ -0.07
NUP88-210ENST00000574867 ZNF12P17014 697 aa14.6□□□□□ -0.07
NUP88-210ENST00000574867 MMP15P51511 669 aa14.6□□□□□ -0.07
NUP88-210ENST00000574867 CDH15P55291 814 aa14.6□□□□□ -0.07
NUP88-210ENST00000574867 ODF4Q2M2E3 257 aa14.6□□□□□ -0.07
NUP88-210ENST00000574867 Q6ZSR3 168 aa14.6□□□□□ -0.07
NUP88-210ENST00000574867 ZNF367Q7RTV3 350 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms