RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 RHEBQ15382 184 aa12.83□□□□□ -0.35
SMG6-215ENST00000574501 TOMM34Q15785 309 aaPredicted RBP12.83□□□□□ -0.35
SMG6-215ENST00000574501 SPNS3Q6ZMD2 512 aa12.83□□□□□ -0.35
SMG6-215ENST00000574501 RNF144BQ7Z419 303 aa12.83□□□□□ -0.35
SMG6-215ENST00000574501 STX12Q86Y82 276 aa12.83□□□□□ -0.35
SMG6-215ENST00000574501 C1QL4Q86Z23 238 aa12.83□□□□□ -0.35
SMG6-215ENST00000574501 HOXB13Q92826 284 aaPredicted RBP12.83□□□□□ -0.35
SMG6-215ENST00000574501 SPACA5Q96QH8 159 aa12.83□□□□□ -0.35
SMG6-215ENST00000574501 Q9N2J8 555 aa12.83□□□□□ -0.35
SMG6-215ENST00000574501 KCNJ16Q9NPI9 418 aa12.83□□□□□ -0.35
SMG6-215ENST00000574501 SLC5A6Q9Y289 635 aa12.83□□□□□ -0.35
SMG6-215ENST00000574501 LOC390937A0A1W2PQ73 354 aa12.83□□□□□ -0.36
SMG6-215ENST00000574501 GPR89AB7ZAQ6 455 aa12.83□□□□□ -0.36
SMG6-215ENST00000574501 SDCBPO00560 298 aaPredicted RBP12.83□□□□□ -0.36
SMG6-215ENST00000574501 ZNF264O43296 627 aa12.83□□□□□ -0.36
SMG6-215ENST00000574501 GPR89BP0CG08 455 aa12.83□□□□□ -0.36
SMG6-215ENST00000574501 SLC35E2P0CK97 266 aa12.83□□□□□ -0.36
SMG6-215ENST00000574501 CT45A8P0DMV1 189 aa12.83□□□□□ -0.36
SMG6-215ENST00000574501 CT45A9P0DMV2 189 aa12.83□□□□□ -0.36
SMG6-215ENST00000574501 BTF3P20290 206 aaKnown RBP12.83□□□□□ -0.36
SMG6-215ENST00000574501 THBS4P35443 961 aa12.83□□□□□ -0.36
SMG6-215ENST00000574501 VIPR2P41587 438 aa12.83□□□□□ -0.36
SMG6-215ENST00000574501 SURF2Q15527 256 aaPredicted RBP12.83□□□□□ -0.36
SMG6-215ENST00000574501 CT45A2Q5DJT8 189 aa12.83□□□□□ -0.36
SMG6-215ENST00000574501 FAM78AQ5JUQ0 283 aa12.83□□□□□ -0.36
SMG6-215ENST00000574501 AGBL4Q5VU57 503 aa12.83□□□□□ -0.36
SMG6-215ENST00000574501 LCN10Q6JVE6 187 aa12.83□□□□□ -0.36
SMG6-215ENST00000574501 KCTD18Q6PI47 426 aaPredicted RBP12.83□□□□□ -0.36
SMG6-215ENST00000574501 RD3Q7Z3Z2 195 aa12.83□□□□□ -0.36
SMG6-215ENST00000574501 LYPD6Q86Y78 171 aa12.83□□□□□ -0.36
SMG6-215ENST00000574501 UBAC2Q8NBM4 344 aa12.83□□□□□ -0.36
SMG6-215ENST00000574501 FLVCR1-AS1Q8TAF5 88 aa12.83□□□□□ -0.36
SMG6-215ENST00000574501 FAM3CQ92520 227 aa12.83□□□□□ -0.36
SMG6-215ENST00000574501 RERGQ96A58 199 aaPredicted RBP12.83□□□□□ -0.36
SMG6-215ENST00000574501 RAB7BQ96AH8 199 aa12.83□□□□□ -0.36
SMG6-215ENST00000574501 GNRHR2Q96P88 292 aa12.83□□□□□ -0.36
SMG6-215ENST00000574501 PARPBPQ9NWS1 579 aa12.83□□□□□ -0.36
SMG6-215ENST00000574501 DEC1Q9P2X7 70 aa12.83□□□□□ -0.36
SMG6-215ENST00000574501 HDGFL3Q9Y3E1 203 aa12.83□□□□□ -0.36
SMG6-215ENST00000574501 SLC31A2O15432 143 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 JTBO76095 146 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 GNRH1P01148 92 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 PNMTP11086 282 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 CTLA4P16410 223 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 IL15RAQ13261 267 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 RSU1Q15404 277 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 C14orf28Q4W4Y0 310 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 ZNF529Q6P280 563 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 DTWD2Q8NBA8 298 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 LIPHQ8WWY8 451 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 ERGIC1Q969X5 290 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 SLC25A36Q96CQ1 311 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 BSCL2Q96G97 398 aaPredicted RBP12.82□□□□□ -0.36
SMG6-215ENST00000574501 G6PC3Q9BUM1 346 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 ZDHHC8Q9ULC8 765 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 A0A1W2PP55 124 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 PRR19A6NJB7 356 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 METTL12A8MUP2 240 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 TGFBR3LH3BV60 316 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 KNG1P01042 644 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 HIST1H1BP16401 226 aaKnown RBP12.82□□□□□ -0.36
SMG6-215ENST00000574501 CAMLGP49069 296 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 ZNF84P51523 738 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 ROM1Q03395 351 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 ERV3-1Q14264 604 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 ZNF674Q2M3X9 581 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 ZNF343Q6P1L6 599 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 CHRDL2Q6WN34 429 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 GALNTL5Q7Z4T8 443 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 KDF1Q8NAX2 398 aaPredicted RBP12.82□□□□□ -0.36
SMG6-215ENST00000574501 CCL4L1Q8NHW4 92 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 METTL21AQ8WXB1 218 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 CNTNAP3Q9BZ76 1288 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 ADAM19Q9H013 955 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 FAM212BQ9NTI7 297 aaPredicted RBP12.82□□□□□ -0.36
SMG6-215ENST00000574501 PPP4R1LQ9P1A2 415 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 OR52A1Q9UKL2 312 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 LSM5Q9Y4Y9 91 aaKnown RBP12.82□□□□□ -0.36
SMG6-215ENST00000574501 URGCP-MRPS24S4R325 110 aa12.82□□□□□ -0.36
SMG6-215ENST00000574501 HIDE1A8MVS5 230 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 RAMP1O60894 148 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 ADH1CP00326 375 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 CXCL10P02778 98 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 TAS2R60P59551 318 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 QRFPP83859 136 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 INSM1Q01101 510 aaPredicted RBP12.81□□□□□ -0.36
SMG6-215ENST00000574501 BIKQ13323 160 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 IAH1Q2TAA2 248 aaPredicted RBP12.81□□□□□ -0.36
SMG6-215ENST00000574501 RPUSD3Q6P087 351 aaKnown RBP12.81□□□□□ -0.36
SMG6-215ENST00000574501 HIST2H3AQ71DI3 136 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 REC114Q7Z4M0 266 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 GRASPQ7Z6J2 395 aaPredicted RBP12.81□□□□□ -0.36
SMG6-215ENST00000574501 LINC00346Q8IVM7 164 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 ZNF101Q8IZC7 436 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 FAM160A2Q8N612 972 aaPredicted RBP12.81□□□□□ -0.36
SMG6-215ENST00000574501 YPEL4Q96NS1 127 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 ZFYVE21Q9BQ24 234 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 GPR61Q9BZJ8 451 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 SLC35B3Q9H1N7 401 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 FGF22Q9HCT0 170 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms