RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 CCL13Q99616 98 aa9.77□□□□□ -0.85
CTNS-208ENST00000574218 NKX3-1Q99801 234 aaPredicted RBP9.77□□□□□ -0.85
CTNS-208ENST00000574218 ATF6BQ99941 703 aa9.77□□□□□ -0.85
CTNS-208ENST00000574218 OCSTAMPQ9BR26 566 aa9.77□□□□□ -0.85
CTNS-208ENST00000574218 NUAK2Q9H093 628 aa9.77□□□□□ -0.85
CTNS-208ENST00000574218 MMP28Q9H239 520 aa9.77□□□□□ -0.85
CTNS-208ENST00000574218 A4GNTQ9UNA3 340 aa9.77□□□□□ -0.85
CTNS-208ENST00000574218 TMEM5Q9Y2B1 443 aa9.77□□□□□ -0.85
CTNS-208ENST00000574218 LHFPL6Q9Y693 200 aa9.77□□□□□ -0.85
CTNS-208ENST00000574218 COL7A1Q02388 2944 aa9.77□□□□□ -0.85
CTNS-208ENST00000574218 A0A1W2PQ09 198 aa9.76□□□□□ -0.85
CTNS-208ENST00000574218 NKX6-3A6NJ46 265 aa9.76□□□□□ -0.85
CTNS-208ENST00000574218 NDUFB2O95178 105 aa9.76□□□□□ -0.85
CTNS-208ENST00000574218 PTBP3O95758 552 aaKnown RBP9.76□□□□□ -0.85
CTNS-208ENST00000574218 IFNW1P05000 195 aa9.76□□□□□ -0.85
CTNS-208ENST00000574218 PAICSP22234 425 aaKnown RBP9.76□□□□□ -0.85
CTNS-208ENST00000574218 YAP1P46937 504 aaKnown RBP9.76□□□□□ -0.85
CTNS-208ENST00000574218 RPS6KA3P51812 740 aa9.76□□□□□ -0.85
CTNS-208ENST00000574218 MAGOHP61326 146 aaKnown RBP9.76□□□□□ -0.85
CTNS-208ENST00000574218 HIST1H3AP68431 136 aa9.76□□□□□ -0.85
CTNS-208ENST00000574218 CD69Q07108 199 aa9.76□□□□□ -0.85
CTNS-208ENST00000574218 TRAP1Q12931 704 aaKnown RBP9.76□□□□□ -0.85
CTNS-208ENST00000574218 IKZF1Q13422 519 aa9.76□□□□□ -0.85
CTNS-208ENST00000574218 MEP1BQ16820 701 aa9.76□□□□□ -0.85
CTNS-208ENST00000574218 LRRC75BQ2VPJ9 315 aa9.76□□□□□ -0.85
CTNS-208ENST00000574218 ARSJQ5FYB0 599 aaPredicted RBP9.76□□□□□ -0.85
CTNS-208ENST00000574218 WDR38Q5JTN6 314 aa9.76□□□□□ -0.85
CTNS-208ENST00000574218 HIST2H3PS2Q5TEC6 136 aa9.76□□□□□ -0.85
CTNS-208ENST00000574218 TEX36Q5VZQ5 186 aa9.76□□□□□ -0.85
CTNS-208ENST00000574218 MBOAT2Q6ZWT7 520 aa9.76□□□□□ -0.85
CTNS-208ENST00000574218 HIST2H3AQ71DI3 136 aa9.76□□□□□ -0.85
CTNS-208ENST00000574218 FAM122BQ7Z309 247 aa9.76□□□□□ -0.85
CTNS-208ENST00000574218 LNX2Q8N448 690 aa9.76□□□□□ -0.85
CTNS-208ENST00000574218 LY6G5BQ8NDX9 201 aa9.76□□□□□ -0.85
CTNS-208ENST00000574218 TSPEARQ8WU66 669 aa9.76□□□□□ -0.85
CTNS-208ENST00000574218 LRRC29Q8WV35 223 aa9.76□□□□□ -0.85
CTNS-208ENST00000574218 VSX1Q9NZR4 365 aaPredicted RBP9.76□□□□□ -0.85
CTNS-208ENST00000574218 MRPL15Q9P015 296 aaKnown RBP9.76□□□□□ -0.85
CTNS-208ENST00000574218 RHCGQ9UBD6 479 aa9.76□□□□□ -0.85
CTNS-208ENST00000574218 PRPF19Q9UMS4 504 aaKnown RBP9.76□□□□□ -0.85
CTNS-208ENST00000574218 M0R135 149 aa9.75□□□□□ -0.85
CTNS-208ENST00000574218 BHLHE40O14503 412 aa9.75□□□□□ -0.85
CTNS-208ENST00000574218 RENP00797 406 aa9.75□□□□□ -0.85
CTNS-208ENST00000574218 HLA-DQA2P01906 255 aa9.75□□□□□ -0.85
CTNS-208ENST00000574218 POU1F1P28069 291 aa9.75□□□□□ -0.85
CTNS-208ENST00000574218 MDH1P40925 334 aaKnown RBP9.75□□□□□ -0.85
CTNS-208ENST00000574218 NAA10P41227 235 aaPredicted RBP9.75□□□□□ -0.85
CTNS-208ENST00000574218 GSK3BP49841 420 aa9.75□□□□□ -0.85
CTNS-208ENST00000574218 FHL1Q13642 323 aa9.75□□□□□ -0.85
CTNS-208ENST00000574218 PCK2Q16822 640 aa9.75□□□□□ -0.85
CTNS-208ENST00000574218 NANOGP8Q6NSW7 305 aa9.75□□□□□ -0.85
CTNS-208ENST00000574218 LIAT1Q6ZQX7 453 aa9.75□□□□□ -0.85
CTNS-208ENST00000574218 TMPRSS11FQ6ZWK6 438 aa9.75□□□□□ -0.85
CTNS-208ENST00000574218 LINC00346Q8IVM7 164 aa9.75□□□□□ -0.85
CTNS-208ENST00000574218 FGFRL1Q8N441 504 aa9.75□□□□□ -0.85
CTNS-208ENST00000574218 PNKDQ8N490 385 aa9.75□□□□□ -0.85
CTNS-208ENST00000574218 FAM216BQ8N7L0 139 aa9.75□□□□□ -0.85
CTNS-208ENST00000574218 PPP1R35Q8TAP8 253 aa9.75□□□□□ -0.85
CTNS-208ENST00000574218 ZNF799Q96GE5 643 aa9.75□□□□□ -0.85
CTNS-208ENST00000574218 DCTN5Q9BTE1 182 aa9.75□□□□□ -0.85
CTNS-208ENST00000574218 NSRP1Q9H0G5 558 aaKnown RBP9.75□□□□□ -0.85
CTNS-208ENST00000574218 METTL8Q9H825 291 aaKnown RBP9.75□□□□□ -0.85
CTNS-208ENST00000574218 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.75□□□□□ -0.85
CTNS-208ENST00000574218 SF3B6Q9Y3B4 125 aaKnown RBP9.75□□□□□ -0.85
CTNS-208ENST00000574218 V9GYY5 206 aaPredicted RBP9.75□□□□□ -0.85
CTNS-208ENST00000574218 A0A1B0GW55 424 aa9.74□□□□□ -0.85
CTNS-208ENST00000574218 ANKRD30BLA7E2S9 258 aa9.74□□□□□ -0.85
CTNS-208ENST00000574218 M0R1W7 72 aa9.74□□□□□ -0.85
CTNS-208ENST00000574218 CDC42EP2O14613 210 aa9.74□□□□□ -0.85
CTNS-208ENST00000574218 FCN3O75636 299 aa9.74□□□□□ -0.85
CTNS-208ENST00000574218 DUX4L2P0CJ85 424 aa9.74□□□□□ -0.85
CTNS-208ENST00000574218 DUX4L3P0CJ86 424 aa9.74□□□□□ -0.85
CTNS-208ENST00000574218 DUX4L4P0CJ87 422 aa9.74□□□□□ -0.85
CTNS-208ENST00000574218 DUX4L5P0CJ88 424 aa9.74□□□□□ -0.85
CTNS-208ENST00000574218 DUX4L6P0CJ89 424 aa9.74□□□□□ -0.85
CTNS-208ENST00000574218 DUX4L7P0CJ90 424 aa9.74□□□□□ -0.85
CTNS-208ENST00000574218 TROVE2P10155 538 aaKnown RBP eCLIP9.74□□□□□ -0.85
CTNS-208ENST00000574218 CD28P10747 220 aa9.74□□□□□ -0.85
CTNS-208ENST00000574218 FAHP16930 419 aa9.74□□□□□ -0.85
CTNS-208ENST00000574218 KDELR2P33947 212 aa9.74□□□□□ -0.85
CTNS-208ENST00000574218 GZMMP51124 257 aa9.74□□□□□ -0.85
CTNS-208ENST00000574218 DLX1P56177 255 aa9.74□□□□□ -0.85
CTNS-208ENST00000574218 SELENOWP63302 87 aa9.74□□□□□ -0.85
CTNS-208ENST00000574218 DUX4L9Q6RFH8 374 aaPredicted RBP9.74□□□□□ -0.85
CTNS-208ENST00000574218 CFAP77Q6ZQR2 320 aa9.74□□□□□ -0.85
CTNS-208ENST00000574218 DPY19L4Q7Z388 723 aa9.74□□□□□ -0.85
CTNS-208ENST00000574218 TSEN54Q7Z6J9 526 aaKnown RBP9.74□□□□□ -0.85
CTNS-208ENST00000574218 CPLX4Q7Z7G2 160 aa9.74□□□□□ -0.85
CTNS-208ENST00000574218 NAA40Q86UY6 237 aa9.74□□□□□ -0.85
CTNS-208ENST00000574218 CYP4Z1Q86W10 505 aa9.74□□□□□ -0.85
CTNS-208ENST00000574218 Q8N7P7 452 aa9.74□□□□□ -0.85
CTNS-208ENST00000574218 OR8J3Q8NGG0 315 aa9.74□□□□□ -0.85
CTNS-208ENST00000574218 OR9Q1Q8NGQ5 310 aa9.74□□□□□ -0.85
CTNS-208ENST00000574218 DYDC1Q8WWB3 177 aa9.74□□□□□ -0.85
CTNS-208ENST00000574218 OPA3Q9H6K4 179 aa9.74□□□□□ -0.85
CTNS-208ENST00000574218 RNPEPL1Q9HAU8 725 aa9.74□□□□□ -0.85
CTNS-208ENST00000574218 SRA1Q9HD15 236 aaKnown RBP9.74□□□□□ -0.85
CTNS-208ENST00000574218 KRCC1Q9NPI7 259 aaPredicted RBP9.74□□□□□ -0.85
CTNS-208ENST00000574218 DUX4Q9UBX2 424 aa9.74□□□□□ -0.85
CTNS-208ENST00000574218 IER3IP1Q9Y5U9 82 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms