RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 RNF4P78317 190 aa16.91■□□□□ 0.3
SCARF1-206ENST00000573852 CTAG1AP78358 180 aa16.91■□□□□ 0.3
SCARF1-206ENST00000573852 PLEKHN1Q494U1 663 aaPredicted RBP16.91■□□□□ 0.3
SCARF1-206ENST00000573852 CCDC157Q569K6 752 aa16.91■□□□□ 0.3
SCARF1-206ENST00000573852 GLIPR1L1Q6UWM5 242 aa16.91■□□□□ 0.3
SCARF1-206ENST00000573852 BAP18Q8IXM2 172 aa16.91■□□□□ 0.3
SCARF1-206ENST00000573852 TMED6Q8WW62 240 aa16.91■□□□□ 0.3
SCARF1-206ENST00000573852 TMEM230Q96A57 120 aa16.91■□□□□ 0.3
SCARF1-206ENST00000573852 RAB33BQ9H082 229 aa16.91■□□□□ 0.3
SCARF1-206ENST00000573852 C5orf66Q9H5L9 145 aa16.91■□□□□ 0.3
SCARF1-206ENST00000573852 UNC13CQ8NB66 2214 aa16.9■□□□□ 0.3
SCARF1-206ENST00000573852 RHPN2P1A8MT19 583 aa16.9■□□□□ 0.3
SCARF1-206ENST00000573852 ANOS1P23352 680 aa16.9■□□□□ 0.3
SCARF1-206ENST00000573852 CFHR1Q03591 330 aa16.9■□□□□ 0.3
SCARF1-206ENST00000573852 TMEM128Q5BJH2 165 aa16.9■□□□□ 0.3
SCARF1-206ENST00000573852 SVBPQ8N300 66 aa16.9■□□□□ 0.3
SCARF1-206ENST00000573852 ST8SIA1Q92185 356 aa16.9■□□□□ 0.3
SCARF1-206ENST00000573852 C1orf147Q96MC9 270 aaPredicted RBP16.9■□□□□ 0.3
SCARF1-206ENST00000573852 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.9■□□□□ 0.3
SCARF1-206ENST00000573852 NPIPB13A6NJU9 1138 aa16.9■□□□□ 0.3
SCARF1-206ENST00000573852 NPIPB4C9JG80 1138 aa16.9■□□□□ 0.3
SCARF1-206ENST00000573852 ADAP1O75689 374 aa16.9■□□□□ 0.3
SCARF1-206ENST00000573852 MPIG6BO95866 241 aa16.9■□□□□ 0.3
SCARF1-206ENST00000573852 CD38P28907 300 aa16.9■□□□□ 0.3
SCARF1-206ENST00000573852 CX3CR1P49238 355 aa16.9■□□□□ 0.3
SCARF1-206ENST00000573852 TAS2R31P59538 309 aa16.9■□□□□ 0.3
SCARF1-206ENST00000573852 SGCAQ16586 387 aa16.9■□□□□ 0.3
SCARF1-206ENST00000573852 NKAPLQ5M9Q1 402 aa16.9■□□□□ 0.3
SCARF1-206ENST00000573852 NUDT16L1Q9BRJ7 211 aaKnown RBP16.9■□□□□ 0.3
SCARF1-206ENST00000573852 BANF2Q9H503 90 aa16.9■□□□□ 0.3
SCARF1-206ENST00000573852 GPR132Q9UNW8 380 aa16.9■□□□□ 0.3
SCARF1-206ENST00000573852 A0A1W2PP11 408 aa16.89■□□□□ 0.29
SCARF1-206ENST00000573852 A0A1W2PR77 199 aa16.89■□□□□ 0.29
SCARF1-206ENST00000573852 MSGN1A6NI15 193 aa16.89■□□□□ 0.29
SCARF1-206ENST00000573852 RAD51DO75771 328 aa16.89■□□□□ 0.29
SCARF1-206ENST00000573852 SLC2A1P11166 492 aa16.89■□□□□ 0.29
SCARF1-206ENST00000573852 PI3P19957 117 aa16.89■□□□□ 0.29
SCARF1-206ENST00000573852 APOBEC1P41238 236 aaKnown RBP16.89■□□□□ 0.29
SCARF1-206ENST00000573852 SCRN3Q0VDG4 424 aa16.89■□□□□ 0.29
SCARF1-206ENST00000573852 FOXF1Q12946 379 aa16.89■□□□□ 0.29
SCARF1-206ENST00000573852 SLC9A3R2Q15599 337 aa16.89■□□□□ 0.29
SCARF1-206ENST00000573852 SMAD2Q15796 467 aaKnown RBP16.89■□□□□ 0.29
SCARF1-206ENST00000573852 OR5AS1Q8N127 324 aa16.89■□□□□ 0.29
SCARF1-206ENST00000573852 TMEM41AQ96HV5 264 aa16.89■□□□□ 0.29
SCARF1-206ENST00000573852 MRPS28Q9Y2Q9 187 aaKnown RBP16.89■□□□□ 0.29
SCARF1-206ENST00000573852 LHFPL6Q9Y693 200 aa16.89■□□□□ 0.29
SCARF1-206ENST00000573852 EFNA2O43921 213 aa16.89■□□□□ 0.29
SCARF1-206ENST00000573852 ZNF20P17024 532 aa16.89■□□□□ 0.29
SCARF1-206ENST00000573852 OR3A4PP47883 348 aa16.89■□□□□ 0.29
SCARF1-206ENST00000573852 TMEM50BP56557 158 aa16.89■□□□□ 0.29
SCARF1-206ENST00000573852 AIMP2Q13155 320 aaKnown RBP16.89■□□□□ 0.29
SCARF1-206ENST00000573852 HFEQ30201 348 aa16.89■□□□□ 0.29
SCARF1-206ENST00000573852 C14orf28Q4W4Y0 310 aa16.89■□□□□ 0.29
SCARF1-206ENST00000573852 CBLN2Q8IUK8 224 aa16.89■□□□□ 0.29
SCARF1-206ENST00000573852 OR4A4PQ8NGN8 299 aa16.89■□□□□ 0.29
SCARF1-206ENST00000573852 RAB3CQ96E17 227 aa16.89■□□□□ 0.29
SCARF1-206ENST00000573852 SERINC1Q9NRX5 453 aa16.89■□□□□ 0.29
SCARF1-206ENST00000573852 KLHL13Q9P2N7 655 aa16.89■□□□□ 0.29
SCARF1-206ENST00000573852 B3GAT1Q9P2W7 334 aa16.89■□□□□ 0.29
SCARF1-206ENST00000573852 ZNF629Q9UEG4 869 aaPredicted RBP16.89■□□□□ 0.29
SCARF1-206ENST00000573852 ANAPC10Q9UM13 185 aa16.89■□□□□ 0.29
SCARF1-206ENST00000573852 LIPT2A6NK58 231 aa16.88■□□□□ 0.29
SCARF1-206ENST00000573852 MTRF1O75570 445 aaKnown RBP16.88■□□□□ 0.29
SCARF1-206ENST00000573852 F12P00748 615 aaPredicted RBP16.88■□□□□ 0.29
SCARF1-206ENST00000573852 CHRM2P08172 466 aa16.88■□□□□ 0.29
SCARF1-206ENST00000573852 LAP3P28838 519 aa16.88■□□□□ 0.29
SCARF1-206ENST00000573852 GPR85P60893 370 aa16.88■□□□□ 0.29
SCARF1-206ENST00000573852 NAAAQ02083 359 aa16.88■□□□□ 0.29
SCARF1-206ENST00000573852 CLEC18BQ6UXF7 455 aa16.88■□□□□ 0.29
SCARF1-206ENST00000573852 MISPQ8IVT2 679 aa16.88■□□□□ 0.29
SCARF1-206ENST00000573852 FAM219AQ8IW50 185 aa16.88■□□□□ 0.29
SCARF1-206ENST00000573852 TLNRD1Q9H1K6 362 aa16.88■□□□□ 0.29
SCARF1-206ENST00000573852 NDRG3Q9UGV2 375 aa16.88■□□□□ 0.29
SCARF1-206ENST00000573852 F8W036 122 aa16.88■□□□□ 0.29
SCARF1-206ENST00000573852 H7C2Y5 167 aa16.88■□□□□ 0.29
SCARF1-206ENST00000573852 FAM157CP0CG43 387 aa16.88■□□□□ 0.29
SCARF1-206ENST00000573852 HIST1H1DP16402 221 aaKnown RBP16.88■□□□□ 0.29
SCARF1-206ENST00000573852 BLOC1S1P78537 153 aa16.88■□□□□ 0.29
SCARF1-206ENST00000573852 CYCSP99999 105 aaKnown RBP16.88■□□□□ 0.29
SCARF1-206ENST00000573852 C17orf67Q0P5P2 114 aa16.88■□□□□ 0.29
SCARF1-206ENST00000573852 PNLIPRP3Q17RR3 467 aa16.88■□□□□ 0.29
SCARF1-206ENST00000573852 HAGHLQ6PII5 290 aaPredicted RBP16.88■□□□□ 0.29
SCARF1-206ENST00000573852 RNF141Q8WVD5 230 aa16.88■□□□□ 0.29
SCARF1-206ENST00000573852 ARL11Q969Q4 196 aa16.88■□□□□ 0.29
SCARF1-206ENST00000573852 DDIT4LQ96D03 193 aa16.88■□□□□ 0.29
SCARF1-206ENST00000573852 MRPL13Q9BYD1 178 aaKnown RBP16.88■□□□□ 0.29
SCARF1-206ENST00000573852 OR5AC2Q9NZP5 309 aa16.88■□□□□ 0.29
SCARF1-206ENST00000573852 ZNF319Q9P2F9 582 aa16.88■□□□□ 0.29
SCARF1-206ENST00000573852 ZNF175Q9Y473 711 aa16.88■□□□□ 0.29
SCARF1-206ENST00000573852 IGHV1OR15-9A0A0B4J2B8 117 aa16.87■□□□□ 0.29
SCARF1-206ENST00000573852 CDC14BO60729 498 aa16.87■□□□□ 0.29
SCARF1-206ENST00000573852 CDAP32320 146 aa16.87■□□□□ 0.29
SCARF1-206ENST00000573852 LTBRP36941 435 aa16.87■□□□□ 0.29
SCARF1-206ENST00000573852 MFAP5Q13361 173 aa16.87■□□□□ 0.29
SCARF1-206ENST00000573852 C10orf91Q5T1B1 145 aa16.87■□□□□ 0.29
SCARF1-206ENST00000573852 COMMD2Q86X83 199 aa16.87■□□□□ 0.29
SCARF1-206ENST00000573852 TMEM231Q9H6L2 316 aa16.87■□□□□ 0.29
SCARF1-206ENST00000573852 SEC61A2Q9H9S3 476 aa16.87■□□□□ 0.29
SCARF1-206ENST00000573852 EXPH5Q8NEV8 1989 aa16.87■□□□□ 0.29
SCARF1-206ENST00000573852 SFT2D2O95562 160 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms