RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 CDK2P24941 298 aa25.38■■□□□ 1.65
CTDNEP1-208ENST00000573600 RFX2P48378 723 aa25.38■■□□□ 1.65
CTDNEP1-208ENST00000573600 MRPS10P82664 201 aaKnown RBP25.38■■□□□ 1.65
CTDNEP1-208ENST00000573600 ALX3O95076 343 aa25.37■■□□□ 1.65
CTDNEP1-208ENST00000573600 PLEKHN1Q494U1 663 aaPredicted RBP25.37■■□□□ 1.65
CTDNEP1-208ENST00000573600 ACSF3Q4G176 576 aaPredicted RBP25.37■■□□□ 1.65
CTDNEP1-208ENST00000573600 IZUMO1Q8IYV9 350 aa25.37■■□□□ 1.65
CTDNEP1-208ENST00000573600 CPEB3Q8NE35 698 aaKnown RBP25.37■■□□□ 1.65
CTDNEP1-208ENST00000573600 SMIM4Q8WVI0 70 aa25.37■■□□□ 1.65
CTDNEP1-208ENST00000573600 PTX4Q96A99 478 aa25.37■■□□□ 1.65
CTDNEP1-208ENST00000573600 ABHD17AQ96GS6 310 aa25.37■■□□□ 1.65
CTDNEP1-208ENST00000573600 REEP6Q96HR9 211 aa25.37■■□□□ 1.65
CTDNEP1-208ENST00000573600 DIABLOQ9NR28 239 aa25.37■■□□□ 1.65
CTDNEP1-208ENST00000573600 RHBDD3Q9Y3P4 386 aa25.37■■□□□ 1.65
CTDNEP1-208ENST00000573600 XRCC3O43542 346 aa25.37■■□□□ 1.65
CTDNEP1-208ENST00000573600 HLA-HP01893 362 aa25.37■■□□□ 1.65
CTDNEP1-208ENST00000573600 UTS2BQ765I0 119 aa25.37■■□□□ 1.65
CTDNEP1-208ENST00000573600 OR5AS1Q8N127 324 aa25.37■■□□□ 1.65
CTDNEP1-208ENST00000573600 NANOS1Q8WY41 292 aaKnown RBP25.37■■□□□ 1.65
CTDNEP1-208ENST00000573600 YIPF5Q969M3 257 aa25.37■■□□□ 1.65
CTDNEP1-208ENST00000573600 GPR137Q96N19 417 aa25.37■■□□□ 1.65
CTDNEP1-208ENST00000573600 CNTD2Q9H8S5 307 aa25.37■■□□□ 1.65
CTDNEP1-208ENST00000573600 CELSR3Q9NYQ7 3312 aa25.36■■□□□ 1.65
CTDNEP1-208ENST00000573600 ZNHIT1O43257 154 aa25.36■■□□□ 1.65
CTDNEP1-208ENST00000573600 CNOT4O95628 575 aaKnown RBP25.36■■□□□ 1.65
CTDNEP1-208ENST00000573600 IL18BPO95998 194 aa25.36■■□□□ 1.65
CTDNEP1-208ENST00000573600 CD79AP11912 226 aa25.36■■□□□ 1.65
CTDNEP1-208ENST00000573600 ZNF93P35789 620 aaPredicted RBP25.36■■□□□ 1.65
CTDNEP1-208ENST00000573600 MAP2K3P46734 347 aa25.36■■□□□ 1.65
CTDNEP1-208ENST00000573600 TFAP2EQ6VUC0 442 aa25.36■■□□□ 1.65
CTDNEP1-208ENST00000573600 OR4D6Q8NGJ1 314 aa25.36■■□□□ 1.65
CTDNEP1-208ENST00000573600 PHF21AQ96BD5 680 aa25.36■■□□□ 1.65
CTDNEP1-208ENST00000573600 PIGLQ9Y2B2 252 aa25.36■■□□□ 1.65
CTDNEP1-208ENST00000573600 LYRM1O43325 122 aa25.35■■□□□ 1.65
CTDNEP1-208ENST00000573600 CTAG2O75638 210 aa25.35■■□□□ 1.65
CTDNEP1-208ENST00000573600 PTH2RP49190 550 aa25.35■■□□□ 1.65
CTDNEP1-208ENST00000573600 RAB1AP62820 205 aa25.35■■□□□ 1.65
CTDNEP1-208ENST00000573600 PLA2G7Q13093 441 aa25.35■■□□□ 1.65
CTDNEP1-208ENST00000573600 TBR1Q16650 682 aa25.35■■□□□ 1.65
CTDNEP1-208ENST00000573600 NSUN5P2Q63ZY6 315 aa25.35■■□□□ 1.65
CTDNEP1-208ENST00000573600 SEMA6DQ8NFY4 1073 aa25.35■■□□□ 1.65
CTDNEP1-208ENST00000573600 BCL2L2Q92843 193 aaPredicted RBP25.35■■□□□ 1.65
CTDNEP1-208ENST00000573600 C1QTNF5Q9BXJ0 243 aa25.35■■□□□ 1.65
CTDNEP1-208ENST00000573600 LDLRAD4O15165 306 aa25.34■■□□□ 1.65
CTDNEP1-208ENST00000573600 XRCC2O43543 280 aa25.34■■□□□ 1.65
CTDNEP1-208ENST00000573600 LANCL1O43813 399 aa25.34■■□□□ 1.65
CTDNEP1-208ENST00000573600 SSX4O60224 188 aa25.34■■□□□ 1.65
CTDNEP1-208ENST00000573600 GABRA1P14867 456 aa25.34■■□□□ 1.65
CTDNEP1-208ENST00000573600 HOXD11P31277 338 aaPredicted RBP25.34■■□□□ 1.65
CTDNEP1-208ENST00000573600 TAS2R20P59543 309 aa25.34■■□□□ 1.65
CTDNEP1-208ENST00000573600 DGCR2P98153 550 aa25.34■■□□□ 1.65
CTDNEP1-208ENST00000573600 PLP2Q04941 152 aa25.34■■□□□ 1.65
CTDNEP1-208ENST00000573600 GCNT2Q8N0V5 402 aa25.34■■□□□ 1.65
CTDNEP1-208ENST00000573600 C9orf106Q8NAJ2 232 aa25.34■■□□□ 1.65
CTDNEP1-208ENST00000573600 OR6K3Q8NGY3 331 aa25.34■■□□□ 1.65
CTDNEP1-208ENST00000573600 NKX3-1Q99801 234 aaPredicted RBP25.34■■□□□ 1.65
CTDNEP1-208ENST00000573600 CHST5Q9GZS9 411 aa25.34■■□□□ 1.65
CTDNEP1-208ENST00000573600 RBFOX1Q9NWB1 397 aaKnown RBP25.34■■□□□ 1.65
CTDNEP1-208ENST00000573600 ZFHX4Q86UP3 3567 aa25.34■■□□□ 1.65
CTDNEP1-208ENST00000573600 GABARAPH6UMI1 98 aa25.34■■□□□ 1.65
CTDNEP1-208ENST00000573600 BPNT1O95861 308 aa25.34■■□□□ 1.65
CTDNEP1-208ENST00000573600 RAB6AP20340 208 aa25.34■■□□□ 1.65
CTDNEP1-208ENST00000573600 EFNB2P52799 333 aa25.34■■□□□ 1.65
CTDNEP1-208ENST00000573600 TGFBR3Q03167 851 aa25.34■■□□□ 1.65
CTDNEP1-208ENST00000573600 KRTCAP3Q53RY4 240 aa25.34■■□□□ 1.65
CTDNEP1-208ENST00000573600 ZNF585AQ6P3V2 769 aa25.34■■□□□ 1.65
CTDNEP1-208ENST00000573600 ENKURQ8TC29 256 aa25.34■■□□□ 1.65
CTDNEP1-208ENST00000573600 AKAP1Q92667 903 aaKnown RBP eCLIP25.34■■□□□ 1.65
CTDNEP1-208ENST00000573600 ZC3HAV1LQ96H79 300 aaKnown RBP25.34■■□□□ 1.65
CTDNEP1-208ENST00000573600 HCKP08631 526 aa25.33■■□□□ 1.65
CTDNEP1-208ENST00000573600 TMIGD3P0DMS9 266 aaPredicted RBP25.33■■□□□ 1.65
CTDNEP1-208ENST00000573600 OR2AE1Q8NHA4 323 aa25.33■■□□□ 1.65
CTDNEP1-208ENST00000573600 PPP1R14BQ96C90 147 aa25.33■■□□□ 1.65
CTDNEP1-208ENST00000573600 B3GNT2Q9NY97 397 aa25.33■■□□□ 1.65
CTDNEP1-208ENST00000573600 GGT3PA6NGU5 568 aa25.32■■□□□ 1.64
CTDNEP1-208ENST00000573600 PRF1P14222 555 aa25.32■■□□□ 1.64
CTDNEP1-208ENST00000573600 FAHP16930 419 aa25.32■■□□□ 1.64
CTDNEP1-208ENST00000573600 RIPPLY1Q0D2K3 151 aa25.32■■□□□ 1.64
CTDNEP1-208ENST00000573600 FAM180AQ6UWF9 173 aa25.32■■□□□ 1.64
CTDNEP1-208ENST00000573600 COLCA1Q6ZS62 124 aa25.32■■□□□ 1.64
CTDNEP1-208ENST00000573600 TOMM5Q8N4H5 51 aa25.32■■□□□ 1.64
CTDNEP1-208ENST00000573600 ATG5Q9H1Y0 275 aa25.32■■□□□ 1.64
CTDNEP1-208ENST00000573600 KCNK15Q9H427 330 aa25.32■■□□□ 1.64
CTDNEP1-208ENST00000573600 TP53TG5Q9Y2B4 290 aa25.32■■□□□ 1.64
CTDNEP1-208ENST00000573600 A0A0A6YYH2 397 aa25.32■■□□□ 1.64
CTDNEP1-208ENST00000573600 ZNF503-AS2A6NEH8 195 aa25.32■■□□□ 1.64
CTDNEP1-208ENST00000573600 A6NJ64 397 aa25.32■■□□□ 1.64
CTDNEP1-208ENST00000573600 CD3GP09693 182 aa25.32■■□□□ 1.64
CTDNEP1-208ENST00000573600 STOMP27105 288 aa25.32■■□□□ 1.64
CTDNEP1-208ENST00000573600 KIR2DL2P43627 348 aaPredicted RBP25.32■■□□□ 1.64
CTDNEP1-208ENST00000573600 UCNP55089 124 aa25.32■■□□□ 1.64
CTDNEP1-208ENST00000573600 Q6ZT83 130 aa25.32■■□□□ 1.64
CTDNEP1-208ENST00000573600 CCDC36Q8IYA8 594 aa25.32■■□□□ 1.64
CTDNEP1-208ENST00000573600 CNEP1R1Q8N9A8 125 aa25.32■■□□□ 1.64
CTDNEP1-208ENST00000573600 SSC4DQ8WTU2 575 aa25.32■■□□□ 1.64
CTDNEP1-208ENST00000573600 FCAMRQ8WWV6 532 aa25.32■■□□□ 1.64
CTDNEP1-208ENST00000573600 NEDD4LQ96PU5 975 aa25.32■■□□□ 1.64
CTDNEP1-208ENST00000573600 RAB22AQ9UL26 194 aa25.32■■□□□ 1.64
CTDNEP1-208ENST00000573600 LOC100509620A0A075B734 347 aa25.31■■□□□ 1.64
CTDNEP1-208ENST00000573600 IGKV1-9A0A0C4DH69 117 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms