RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 CELA2AP08217 269 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 HCKP08631 526 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 MGMTP16455 207 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 MSX1P28360 303 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 CASRP41180 1078 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 FGL1Q08830 312 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 OR5AS1Q8N127 324 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 WDSUB1Q8N9V3 476 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 BVESQ8NE79 360 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 OR4K17Q8NGC6 315 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 MARCH1Q8TCQ1 289 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 NPRL2Q8WTW4 380 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 SPACA9Q96E40 222 aaPredicted RBP9.92□□□□□ -0.82
RPAIN-212ENST00000573126 CCDC74BQ96LY2 380 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 VRK1Q99986 396 aaPredicted RBP9.92□□□□□ -0.82
RPAIN-212ENST00000573126 LPAR5Q9H1C0 372 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 MED9Q9NWA0 146 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 ARID1AO14497 2285 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 E9PLN8 166 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 SIGLEC5O15389 551 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 SIGLEC6O43699 453 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 CX3CR1P49238 355 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 STARD6P59095 220 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 SIGLEC14Q08ET2 396 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 SLC25A53Q5H9E4 307 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 PLAC9Q5JTB6 97 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 ZNF385CQ66K41 422 aaPredicted RBP9.92□□□□□ -0.82
RPAIN-212ENST00000573126 JMJD6Q6NYC1 403 aaPredicted RBP9.92□□□□□ -0.82
RPAIN-212ENST00000573126 LPCAT3Q6P1A2 487 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 PPP1R3BQ86XI6 285 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 ZNF283Q8N7M2 679 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 OR4K15Q8NH41 348 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 MITD1Q8WV92 249 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 GPER1Q99527 375 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 PHB2Q99623 299 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 ZNF471Q9BX82 626 aaPredicted RBP9.92□□□□□ -0.82
RPAIN-212ENST00000573126 TNFSF18Q9UNG2 199 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 PI4KAP42356 2102 aa9.92□□□□□ -0.82
RPAIN-212ENST00000573126 LY6G6EA0A0G2JKS1 128 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 KANTRA0A1W2PQU2 76 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 RNF222A6NCQ9 220 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 SULT2B1O00204 365 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 FGF2P09038 288 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 DLSTP36957 453 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 NAA40Q86UY6 237 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 ZBTB44Q8NCP5 570 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 OR10K1Q8NGX5 313 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 SLC22A8Q8TCC7 542 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 RAB3CQ96E17 227 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 C1orf147Q96MC9 270 aaPredicted RBP9.91□□□□□ -0.82
RPAIN-212ENST00000573126 PNRC2Q9NPJ4 139 aaKnown RBP9.91□□□□□ -0.82
RPAIN-212ENST00000573126 OCIAD1Q9NX40 245 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 U3KQA8 63 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 A0A0D9SG52 128 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 C13orf42A0A1B0GVH6 325 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 ZNF726A6NNF4 738 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 K7ESF4 209 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 NUPL2O15504 423 aaKnown RBP9.91□□□□□ -0.82
RPAIN-212ENST00000573126 EFSO43281 561 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 CRTAPO75718 401 aaPredicted RBP9.91□□□□□ -0.82
RPAIN-212ENST00000573126 HPP00738 406 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 PI3P19957 117 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 EPHA8P29322 1005 aaPredicted RBP9.91□□□□□ -0.82
RPAIN-212ENST00000573126 CXCL12P48061 93 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 DHPSP49366 369 aaPredicted RBP9.91□□□□□ -0.82
RPAIN-212ENST00000573126 CLDN17P56750 224 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 RIPPLY1Q0D2K3 151 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 SGCAQ16586 387 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 MICBQ29980 383 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 ELP2Q6IA86 826 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 KCNRGQ8N5I3 272 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 ZDHHC22Q8N966 263 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 SPERTQ8NA61 448 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 OR6X1Q8NH79 312 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 ZC3H10Q96K80 434 aaKnown RBP9.91□□□□□ -0.82
RPAIN-212ENST00000573126 TMEM59Q9BXS4 323 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 IGLV3-32A0A0A0MS00 114 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 IGHV3-15A0A0B4J1V0 119 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 KRBOX1C9JBD0 128 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 G3V3Y1 287 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 CDC14BO60729 498 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 IL2RAP01589 272 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 NPY4RP50391 375 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 TMEM50BP56557 158 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 ZMYND11Q15326 602 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 RSPO4Q2I0M5 234 aaPredicted RBP9.91□□□□□ -0.82
RPAIN-212ENST00000573126 SLC25A47Q6Q0C1 308 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 OVCH2Q7RTZ1 564 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 BOLLQ8N9W6 283 aaKnown RBP9.91□□□□□ -0.82
RPAIN-212ENST00000573126 OXGR1Q96P68 337 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 ZNF416Q9BWM5 594 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 MOB1AQ9H8S9 216 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 PRR13Q9NZ81 148 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 MBD2Q9UBB5 411 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 PISDQ9UG56 409 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 B3GALT1Q9Y5Z6 326 aa9.91□□□□□ -0.82
RPAIN-212ENST00000573126 CHCHD2Q9Y6H1 151 aaPredicted RBP9.91□□□□□ -0.82
RPAIN-212ENST00000573126 IGKV1-9A0A0C4DH69 117 aa9.9□□□□□ -0.82
RPAIN-212ENST00000573126 C5orf51A6NDU8 294 aa9.9□□□□□ -0.82
RPAIN-212ENST00000573126 D6RAR5 112 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms