RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 PITX2Q99697 317 aa9.24□□□□□ -0.93
CHMP6-202ENST00000571457 B9D2Q9BPU9 175 aa9.24□□□□□ -0.93
CHMP6-202ENST00000571457 DCTN5Q9BTE1 182 aa9.24□□□□□ -0.93
CHMP6-202ENST00000571457 NUAK2Q9H093 628 aa9.24□□□□□ -0.93
CHMP6-202ENST00000571457 MEGF9Q9H1U4 602 aa9.24□□□□□ -0.93
CHMP6-202ENST00000571457 RNPEPL1Q9HAU8 725 aa9.24□□□□□ -0.93
CHMP6-202ENST00000571457 VSX1Q9NZR4 365 aaPredicted RBP9.24□□□□□ -0.93
CHMP6-202ENST00000571457 SF3B6Q9Y3B4 125 aaKnown RBP9.24□□□□□ -0.93
CHMP6-202ENST00000571457 IGHV3OR15-7A0A075B7D8 119 aa9.23□□□□□ -0.93
CHMP6-202ENST00000571457 E9PQ18 207 aa9.23□□□□□ -0.93
CHMP6-202ENST00000571457 M0R1W7 72 aa9.23□□□□□ -0.93
CHMP6-202ENST00000571457 ZNF26P17031 533 aaPredicted RBP9.23□□□□□ -0.93
CHMP6-202ENST00000571457 PAICSP22234 425 aaKnown RBP9.23□□□□□ -0.93
CHMP6-202ENST00000571457 CRABP1P29762 137 aa9.23□□□□□ -0.93
CHMP6-202ENST00000571457 SDHAP31040 664 aa9.23□□□□□ -0.93
CHMP6-202ENST00000571457 GGT2P36268 569 aa9.23□□□□□ -0.93
CHMP6-202ENST00000571457 CENPAP49450 140 aa9.23□□□□□ -0.93
CHMP6-202ENST00000571457 SLC18A1P54219 525 aa9.23□□□□□ -0.93
CHMP6-202ENST00000571457 TRAP1Q12931 704 aaKnown RBP9.23□□□□□ -0.93
CHMP6-202ENST00000571457 NFYCQ13952 458 aa9.23□□□□□ -0.93
CHMP6-202ENST00000571457 TRAM2Q15035 370 aa9.23□□□□□ -0.93
CHMP6-202ENST00000571457 PCK2Q16822 640 aa9.23□□□□□ -0.93
CHMP6-202ENST00000571457 WDR38Q5JTN6 314 aa9.23□□□□□ -0.93
CHMP6-202ENST00000571457 CRIP3Q6Q6R5 217 aa9.23□□□□□ -0.93
CHMP6-202ENST00000571457 CORO6Q6QEF8 472 aa9.23□□□□□ -0.93
CHMP6-202ENST00000571457 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.23□□□□□ -0.93
CHMP6-202ENST00000571457 FGFRL1Q8N441 504 aa9.23□□□□□ -0.93
CHMP6-202ENST00000571457 PNKDQ8N490 385 aa9.23□□□□□ -0.93
CHMP6-202ENST00000571457 OR5D13Q8NGL4 314 aa9.23□□□□□ -0.93
CHMP6-202ENST00000571457 H1FXQ92522 213 aaKnown RBP9.23□□□□□ -0.93
CHMP6-202ENST00000571457 NKX3-1Q99801 234 aaPredicted RBP9.23□□□□□ -0.93
CHMP6-202ENST00000571457 ATF6BQ99941 703 aa9.23□□□□□ -0.93
CHMP6-202ENST00000571457 SH3GL1Q99961 368 aa9.23□□□□□ -0.93
CHMP6-202ENST00000571457 CITED2Q99967 270 aaPredicted RBP9.23□□□□□ -0.93
CHMP6-202ENST00000571457 A4GNTQ9UNA3 340 aa9.23□□□□□ -0.93
CHMP6-202ENST00000571457 ADARB2-AS1A8MUL3 147 aa9.22□□□□□ -0.93
CHMP6-202ENST00000571457 BHLHE40O14503 412 aa9.22□□□□□ -0.93
CHMP6-202ENST00000571457 DUS4LO95620 317 aaKnown RBP9.22□□□□□ -0.93
CHMP6-202ENST00000571457 PPP1R3DO95685 299 aa9.22□□□□□ -0.93
CHMP6-202ENST00000571457 MDH1P40925 334 aaKnown RBP9.22□□□□□ -0.93
CHMP6-202ENST00000571457 NAA10P41227 235 aaPredicted RBP9.22□□□□□ -0.93
CHMP6-202ENST00000571457 GSK3BP49841 420 aa9.22□□□□□ -0.93
CHMP6-202ENST00000571457 SLC35A2P78381 396 aa9.22□□□□□ -0.93
CHMP6-202ENST00000571457 COL10A1Q03692 680 aa9.22□□□□□ -0.93
CHMP6-202ENST00000571457 IKZF1Q13422 519 aa9.22□□□□□ -0.93
CHMP6-202ENST00000571457 SLC36A3Q495N2 470 aa9.22□□□□□ -0.93
CHMP6-202ENST00000571457 WDR93Q6P2C0 686 aa9.22□□□□□ -0.93
CHMP6-202ENST00000571457 ZNF730Q6ZMV8 503 aa9.22□□□□□ -0.93
CHMP6-202ENST00000571457 TMPRSS11FQ6ZWK6 438 aa9.22□□□□□ -0.93
CHMP6-202ENST00000571457 RRM2BQ7LG56 351 aa9.22□□□□□ -0.93
CHMP6-202ENST00000571457 TSEN54Q7Z6J9 526 aaKnown RBP9.22□□□□□ -0.93
CHMP6-202ENST00000571457 OFCC1Q8IZS5 231 aa9.22□□□□□ -0.93
CHMP6-202ENST00000571457 FAM216BQ8N7L0 139 aa9.22□□□□□ -0.93
CHMP6-202ENST00000571457 OR2AJ1Q8NGZ0 328 aa9.22□□□□□ -0.93
CHMP6-202ENST00000571457 TSPEARQ8WU66 669 aa9.22□□□□□ -0.93
CHMP6-202ENST00000571457 LRRC29Q8WV35 223 aa9.22□□□□□ -0.93
CHMP6-202ENST00000571457 RORBQ92753 470 aa9.22□□□□□ -0.93
CHMP6-202ENST00000571457 SPTSSAQ969W0 71 aa9.22□□□□□ -0.93
CHMP6-202ENST00000571457 RCC1LQ96I51 464 aaKnown RBP9.22□□□□□ -0.93
CHMP6-202ENST00000571457 C7orf26Q96N11 449 aa9.22□□□□□ -0.93
CHMP6-202ENST00000571457 EBF4Q9BQW3 602 aa9.22□□□□□ -0.93
CHMP6-202ENST00000571457 FNDC11Q9BVV2 318 aa9.22□□□□□ -0.93
CHMP6-202ENST00000571457 DNTTIP1Q9H147 329 aa9.22□□□□□ -0.93
CHMP6-202ENST00000571457 SERTAD4Q9NUC0 356 aa9.22□□□□□ -0.93
CHMP6-202ENST00000571457 A0A1B0GW55 424 aa9.21□□□□□ -0.94
CHMP6-202ENST00000571457 A0A1W2PQ09 198 aa9.21□□□□□ -0.94
CHMP6-202ENST00000571457 WI2-2373I1.2A0A1W2PRP0 233 aa9.21□□□□□ -0.94
CHMP6-202ENST00000571457 M0R135 149 aa9.21□□□□□ -0.94
CHMP6-202ENST00000571457 CDC42EP2O14613 210 aa9.21□□□□□ -0.94
CHMP6-202ENST00000571457 CHST1O43916 411 aa9.21□□□□□ -0.94
CHMP6-202ENST00000571457 NDUFB2O95178 105 aa9.21□□□□□ -0.94
CHMP6-202ENST00000571457 DUX4L2P0CJ85 424 aa9.21□□□□□ -0.94
CHMP6-202ENST00000571457 DUX4L3P0CJ86 424 aa9.21□□□□□ -0.94
CHMP6-202ENST00000571457 DUX4L4P0CJ87 422 aa9.21□□□□□ -0.94
CHMP6-202ENST00000571457 DUX4L5P0CJ88 424 aa9.21□□□□□ -0.94
CHMP6-202ENST00000571457 DUX4L6P0CJ89 424 aa9.21□□□□□ -0.94
CHMP6-202ENST00000571457 DUX4L7P0CJ90 424 aa9.21□□□□□ -0.94
CHMP6-202ENST00000571457 PF4V1P10720 104 aa9.21□□□□□ -0.94
CHMP6-202ENST00000571457 MSX2P35548 267 aaPredicted RBP9.21□□□□□ -0.94
CHMP6-202ENST00000571457 GPR4P46093 362 aa9.21□□□□□ -0.94
CHMP6-202ENST00000571457 TGM4P49221 684 aa9.21□□□□□ -0.94
CHMP6-202ENST00000571457 GZMMP51124 257 aa9.21□□□□□ -0.94
CHMP6-202ENST00000571457 DLX1P56177 255 aa9.21□□□□□ -0.94
CHMP6-202ENST00000571457 ZNF92Q03936 586 aa9.21□□□□□ -0.94
CHMP6-202ENST00000571457 MEP1BQ16820 701 aa9.21□□□□□ -0.94
CHMP6-202ENST00000571457 CYBRD1Q53TN4 286 aa9.21□□□□□ -0.94
CHMP6-202ENST00000571457 ATPAF1Q5TC12 328 aaPredicted RBP9.21□□□□□ -0.94
CHMP6-202ENST00000571457 SLC18B1Q6NT16 456 aa9.21□□□□□ -0.94
CHMP6-202ENST00000571457 ERICH5Q6P6B1 374 aa9.21□□□□□ -0.94
CHMP6-202ENST00000571457 DUX4L9Q6RFH8 374 aaPredicted RBP9.21□□□□□ -0.94
CHMP6-202ENST00000571457 MBOAT2Q6ZWT7 520 aa9.21□□□□□ -0.94
CHMP6-202ENST00000571457 NAA40Q86UY6 237 aa9.21□□□□□ -0.94
CHMP6-202ENST00000571457 Q8N2B8 174 aa9.21□□□□□ -0.94
CHMP6-202ENST00000571457 OR9Q1Q8NGQ5 310 aa9.21□□□□□ -0.94
CHMP6-202ENST00000571457 OR8S1Q8NH09 359 aa9.21□□□□□ -0.94
CHMP6-202ENST00000571457 ZNF799Q96GE5 643 aa9.21□□□□□ -0.94
CHMP6-202ENST00000571457 CDCA4Q9BXL8 241 aa9.21□□□□□ -0.94
CHMP6-202ENST00000571457 GPR61Q9BZJ8 451 aa9.21□□□□□ -0.94
CHMP6-202ENST00000571457 OPA3Q9H6K4 179 aa9.21□□□□□ -0.94
CHMP6-202ENST00000571457 ZNF702PQ9H963 129 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms