RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 OR7A5Q15622 319 aa5.65□□□□□ -1.5
CHD3-213ENST00000571249 PDZK1Q5T2W1 519 aa5.65□□□□□ -1.5
CHD3-213ENST00000571249 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.65□□□□□ -1.5
CHD3-213ENST00000571249 CYP4Z1Q86W10 505 aa5.65□□□□□ -1.5
CHD3-213ENST00000571249 PAQR4Q8N4S7 273 aaPredicted RBP5.65□□□□□ -1.5
CHD3-213ENST00000571249 ZNF283Q8N7M2 679 aa5.65□□□□□ -1.5
CHD3-213ENST00000571249 PIK3C3Q8NEB9 887 aa5.65□□□□□ -1.5
CHD3-213ENST00000571249 OR5AN1Q8NGI8 311 aa5.65□□□□□ -1.5
CHD3-213ENST00000571249 OR5AK3PQ8NH89 298 aa5.65□□□□□ -1.5
CHD3-213ENST00000571249 LINC00476Q8WZB0 136 aa5.65□□□□□ -1.5
CHD3-213ENST00000571249 PLEKHA8Q96JA3 519 aa5.65□□□□□ -1.5
CHD3-213ENST00000571249 SLC35G5Q96KT7 338 aa5.65□□□□□ -1.5
CHD3-213ENST00000571249 MS4A4EQ96PG1 132 aa5.65□□□□□ -1.5
CHD3-213ENST00000571249 PITX2Q99697 317 aa5.65□□□□□ -1.5
CHD3-213ENST00000571249 RBM38Q9H0Z9 239 aaKnown RBP5.65□□□□□ -1.5
CHD3-213ENST00000571249 REEP1Q9H902 201 aa5.65□□□□□ -1.5
CHD3-213ENST00000571249 LYVE1Q9Y5Y7 322 aa5.65□□□□□ -1.5
CHD3-213ENST00000571249 TMED7-TICAM2A0A0A6YYA0 188 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 A0A0G2JPF8 293 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 LOC100130705A0A1B0GUX0 176 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 PLSCR5A0PG75 271 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 LIPT2A6NK58 231 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 ZNF99A8MXY4 864 aaPredicted RBP5.64□□□□□ -1.51
CHD3-213ENST00000571249 HNRNPCL2B2RXH8 293 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 ZNF879B4DU55 563 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 HNRNPCL3B7ZW38 293 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 C5orf58C9J3I9 102 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 E2F6O75461 281 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 CSTAP01040 98 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 IGHV3-13P01766 116 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 OPN1SWP03999 348 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 CD1AP06126 327 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 GUSBP08236 651 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 HNRNPCL4P0DMR1 293 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 ANXA8P13928 327 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 MMP9P14780 707 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 JUNBP17275 347 aaPredicted RBP5.64□□□□□ -1.51
CHD3-213ENST00000571249 CPT2P23786 658 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 GTF2E2P29084 291 aaKnown RBP5.64□□□□□ -1.51
CHD3-213ENST00000571249 MMP15P51511 669 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 P2RY4P51582 365 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 CLDN17P56750 224 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 GABARAPL2P60520 117 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 CXCR4P61073 352 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 DGCR2P98153 550 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 COX10Q12887 443 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 TOP3AQ13472 1001 aaPredicted RBP5.64□□□□□ -1.51
CHD3-213ENST00000571249 CAMK2DQ13557 499 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 SPDYE7PQ495Y7 208 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 RBM48Q5RL73 367 aaKnown RBP5.64□□□□□ -1.51
CHD3-213ENST00000571249 DCST2Q5T1A1 773 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 ZNF691Q5VV52 312 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 SLC27A4Q6P1M0 643 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 ZCCHC12Q6PEW1 402 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 TTC33Q6PID6 262 aaPredicted RBP5.64□□□□□ -1.51
CHD3-213ENST00000571249 ZNF584Q8IVC4 421 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 HS3ST5Q8IZT8 346 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 C8orf59Q8N0T1 100 aaPredicted RBP5.64□□□□□ -1.51
CHD3-213ENST00000571249 GPR137CQ8N3F9 429 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 ZNF555Q8NEP9 628 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 GPR32P1Q8NGA4 272 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 BBS10Q8TAM1 723 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 CYGBQ8WWM9 190 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 ISOC1Q96CN7 298 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 DGCR14Q96DF8 476 aaKnown RBP5.64□□□□□ -1.51
CHD3-213ENST00000571249 TMEM19Q96HH6 336 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 TPD52L3Q96J77 140 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 SIGLEC11Q96RL6 698 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 ZNF607Q96SK3 696 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 FUZQ9BT04 418 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 SPATA5L1Q9BVQ7 753 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 GABARAPL3Q9BY60 117 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 ACTRT3Q9BYD9 372 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 GPR61Q9BZJ8 451 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 OR51I1Q9H343 314 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 PIGUQ9H490 435 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 DUSP22Q9NRW4 184 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 ZCCHC3Q9NUD5 404 aaKnown RBP5.64□□□□□ -1.51
CHD3-213ENST00000571249 ZNF224Q9NZL3 707 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 CALML5Q9NZT1 146 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 ZNRD1Q9P1U0 126 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 P2RX2Q9UBL9 471 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 NDRG4Q9ULP0 352 aaKnown RBP5.64□□□□□ -1.51
CHD3-213ENST00000571249 TMED7Q9Y3B3 224 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 SAMHD1Q9Y3Z3 626 aaKnown RBP5.64□□□□□ -1.51
CHD3-213ENST00000571249 ORC6Q9Y5N6 252 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 KCNE3Q9Y6H6 103 aa5.64□□□□□ -1.51
CHD3-213ENST00000571249 TMEM247A6NEH6 219 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 DUXAA6NLW8 204 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 ZNF701M0R085 212 aaPredicted RBP5.63□□□□□ -1.51
CHD3-213ENST00000571249 M0R3G1 203 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 RAB27BO00194 218 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 TNFRSF11BO00300 401 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 ZNF208O43345 1280 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 ENSAO43768 121 aaKnown RBP5.63□□□□□ -1.51
CHD3-213ENST00000571249 SLC25A17O43808 307 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 MRPS14O60783 128 aaKnown RBP5.63□□□□□ -1.51
CHD3-213ENST00000571249 BCAS1O75363 584 aaPredicted RBP5.63□□□□□ -1.51
CHD3-213ENST00000571249 SERPINB7O75635 380 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 VAMP5O95183 116 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms