RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 ISL1P61371 349 aa11.35□□□□□ -0.59
CCDC40-205ENST00000571028 SCGB2A2Q13296 93 aa11.35□□□□□ -0.59
CCDC40-205ENST00000571028 NKPD1Q17RQ9 610 aa11.35□□□□□ -0.59
CCDC40-205ENST00000571028 SNAI3Q3KNW1 292 aa11.35□□□□□ -0.59
CCDC40-205ENST00000571028 KRTAP27-1Q3LI81 207 aa11.35□□□□□ -0.59
CCDC40-205ENST00000571028 TP53I3Q53FA7 332 aa11.35□□□□□ -0.59
CCDC40-205ENST00000571028 DRAM2Q6UX65 266 aa11.35□□□□□ -0.59
CCDC40-205ENST00000571028 THAP5Q7Z6K1 395 aa11.35□□□□□ -0.59
CCDC40-205ENST00000571028 OR5AS1Q8N127 324 aa11.35□□□□□ -0.59
CCDC40-205ENST00000571028 ZCCHC24Q8N2G6 241 aaKnown RBP11.35□□□□□ -0.59
CCDC40-205ENST00000571028 BPIFB6Q8NFQ5 453 aa11.35□□□□□ -0.59
CCDC40-205ENST00000571028 OR5L1Q8NGL2 311 aa11.35□□□□□ -0.59
CCDC40-205ENST00000571028 OR2T27Q8NH04 317 aa11.35□□□□□ -0.59
CCDC40-205ENST00000571028 OR2AE1Q8NHA4 323 aa11.35□□□□□ -0.59
CCDC40-205ENST00000571028 SNX33Q8WV41 574 aa11.35□□□□□ -0.59
CCDC40-205ENST00000571028 IPCEF1Q8WWN9 437 aaPredicted RBP11.35□□□□□ -0.59
CCDC40-205ENST00000571028 MARS2Q96GW9 593 aaKnown RBP11.35□□□□□ -0.59
CCDC40-205ENST00000571028 OR8B4Q96RC9 309 aa11.35□□□□□ -0.59
CCDC40-205ENST00000571028 MNTQ99583 582 aa11.35□□□□□ -0.59
CCDC40-205ENST00000571028 TPK1Q9H3S4 243 aa11.35□□□□□ -0.59
CCDC40-205ENST00000571028 TIMM8AO60220 97 aaPredicted RBP11.34□□□□□ -0.59
CCDC40-205ENST00000571028 FADS2O95864 444 aaKnown RBP11.34□□□□□ -0.59
CCDC40-205ENST00000571028 KRT8P05787 483 aa11.34□□□□□ -0.59
CCDC40-205ENST00000571028 HSPA13P48723 471 aa11.34□□□□□ -0.59
CCDC40-205ENST00000571028 RIDAP52758 137 aaKnown RBP11.34□□□□□ -0.59
CCDC40-205ENST00000571028 ZNF85Q03923 595 aa11.34□□□□□ -0.59
CCDC40-205ENST00000571028 MALLQ13021 153 aa11.34□□□□□ -0.59
CCDC40-205ENST00000571028 SNCBQ16143 134 aa11.34□□□□□ -0.59
CCDC40-205ENST00000571028 PDLIM3Q53GG5 364 aaPredicted RBP11.34□□□□□ -0.59
CCDC40-205ENST00000571028 OR2T2Q6IF00 324 aa11.34□□□□□ -0.59
CCDC40-205ENST00000571028 USP51Q70EK9 711 aa11.34□□□□□ -0.59
CCDC40-205ENST00000571028 MRPL21Q7Z2W9 205 aaKnown RBP11.34□□□□□ -0.59
CCDC40-205ENST00000571028 LHFPL3Q86UP9 236 aa11.34□□□□□ -0.59
CCDC40-205ENST00000571028 ZNF679Q8IYX0 411 aa11.34□□□□□ -0.59
CCDC40-205ENST00000571028 GTF3AQ92664 365 aaKnown RBP11.34□□□□□ -0.59
CCDC40-205ENST00000571028 CNBD2Q96M20 576 aa11.34□□□□□ -0.59
CCDC40-205ENST00000571028 COG8Q96MW5 612 aa11.34□□□□□ -0.59
CCDC40-205ENST00000571028 DOK1Q99704 481 aa11.34□□□□□ -0.59
CCDC40-205ENST00000571028 C1QTNF5Q9BXJ0 243 aa11.34□□□□□ -0.59
CCDC40-205ENST00000571028 MRM2Q9UI43 246 aaKnown RBP11.34□□□□□ -0.59
CCDC40-205ENST00000571028 GNG8Q9UK08 70 aa11.34□□□□□ -0.59
CCDC40-205ENST00000571028 MYRFQ9Y2G1 1151 aa11.34□□□□□ -0.59
CCDC40-205ENST00000571028 HSPE1-MOB4S4R3N1 261 aa11.34□□□□□ -0.59
CCDC40-205ENST00000571028 MGAM2Q2M2H8 2515 aa11.33□□□□□ -0.6
CCDC40-205ENST00000571028 M0R233 179 aa11.33□□□□□ -0.6
CCDC40-205ENST00000571028 XPNPEP2O43895 674 aa11.33□□□□□ -0.6
CCDC40-205ENST00000571028 VENTXO95231 258 aa11.33□□□□□ -0.6
CCDC40-205ENST00000571028 APOC1P02654 83 aa11.33□□□□□ -0.6
CCDC40-205ENST00000571028 NAT2P11245 290 aa11.33□□□□□ -0.6
CCDC40-205ENST00000571028 ZNF250P15622 560 aa11.33□□□□□ -0.6
CCDC40-205ENST00000571028 COMPP49747 757 aaPredicted RBP11.33□□□□□ -0.6
CCDC40-205ENST00000571028 CHN2P52757 468 aa11.33□□□□□ -0.6
CCDC40-205ENST00000571028 PSG7Q13046 419 aa11.33□□□□□ -0.6
CCDC40-205ENST00000571028 EFNB3Q15768 340 aa11.33□□□□□ -0.6
CCDC40-205ENST00000571028 TIGD6Q17RP2 521 aa11.33□□□□□ -0.6
CCDC40-205ENST00000571028 SWI5Q1ZZU3 235 aa11.33□□□□□ -0.6
CCDC40-205ENST00000571028 KLHL22Q53GT1 634 aa11.33□□□□□ -0.6
CCDC40-205ENST00000571028 GLYATL3Q5SZD4 288 aa11.33□□□□□ -0.6
CCDC40-205ENST00000571028 COMMD2Q86X83 199 aa11.33□□□□□ -0.6
CCDC40-205ENST00000571028 ACBD7Q8N6N7 88 aa11.33□□□□□ -0.6
CCDC40-205ENST00000571028 BHLHE23Q8NDY6 225 aa11.33□□□□□ -0.6
CCDC40-205ENST00000571028 OR52I1Q8NGK6 324 aa11.33□□□□□ -0.6
CCDC40-205ENST00000571028 PPP1R14AQ96A00 147 aa11.33□□□□□ -0.6
CCDC40-205ENST00000571028 SORCS2Q96PQ0 1159 aa11.33□□□□□ -0.6
CCDC40-205ENST00000571028 BPESC1Q9GZL8 116 aa11.33□□□□□ -0.6
CCDC40-205ENST00000571028 EXOGQ9Y2C4 368 aaKnown RBP11.33□□□□□ -0.6
CCDC40-205ENST00000571028 PCDHGB1Q9Y5G3 927 aa11.33□□□□□ -0.6
CCDC40-205ENST00000571028 TMEM269A0A1B0GVZ9 245 aa11.32□□□□□ -0.6
CCDC40-205ENST00000571028 GGT3PA6NGU5 568 aa11.32□□□□□ -0.6
CCDC40-205ENST00000571028 METTL15A6NJ78 407 aa11.32□□□□□ -0.6
CCDC40-205ENST00000571028 J3QLW9 94 aa11.32□□□□□ -0.6
CCDC40-205ENST00000571028 SPRY3O43610 288 aa11.32□□□□□ -0.6
CCDC40-205ENST00000571028 ICMTO60725 284 aa11.32□□□□□ -0.6
CCDC40-205ENST00000571028 ZNF19P17023 458 aa11.32□□□□□ -0.6
CCDC40-205ENST00000571028 OTX1P32242 354 aaPredicted RBP11.32□□□□□ -0.6
CCDC40-205ENST00000571028 PSMB10P40306 273 aa11.32□□□□□ -0.6
CCDC40-205ENST00000571028 ACTC1P68032 377 aa11.32□□□□□ -0.6
CCDC40-205ENST00000571028 ACTA1P68133 377 aa11.32□□□□□ -0.6
CCDC40-205ENST00000571028 ROM1Q03395 351 aa11.32□□□□□ -0.6
CCDC40-205ENST00000571028 ZNF92Q03936 586 aa11.32□□□□□ -0.6
CCDC40-205ENST00000571028 EGR3Q06889 387 aa11.32□□□□□ -0.6
CCDC40-205ENST00000571028 MFGE8Q08431 387 aaPredicted RBP11.32□□□□□ -0.6
CCDC40-205ENST00000571028 RAB40BQ12829 278 aa11.32□□□□□ -0.6
CCDC40-205ENST00000571028 ODF4Q2M2E3 257 aa11.32□□□□□ -0.6
CCDC40-205ENST00000571028 ZNF829Q3KNS6 432 aaPredicted RBP11.32□□□□□ -0.6
CCDC40-205ENST00000571028 TMEM255AQ5JRV8 349 aa11.32□□□□□ -0.6
CCDC40-205ENST00000571028 MBNL2Q5VZF2 373 aaKnown RBP11.32□□□□□ -0.6
CCDC40-205ENST00000571028 LAIR2Q6ISS4 152 aa11.32□□□□□ -0.6
CCDC40-205ENST00000571028 COLCA1Q6ZS62 124 aa11.32□□□□□ -0.6
CCDC40-205ENST00000571028 FAM220AQ7Z4H9 259 aa11.32□□□□□ -0.6
CCDC40-205ENST00000571028 C1orf174Q8IYL3 243 aa11.32□□□□□ -0.6
CCDC40-205ENST00000571028 LINC01356Q8N9X3 169 aa11.32□□□□□ -0.6
CCDC40-205ENST00000571028 ZNF418Q8TF45 676 aaPredicted RBP11.32□□□□□ -0.6
CCDC40-205ENST00000571028 GGHQ92820 318 aa11.32□□□□□ -0.6
CCDC40-205ENST00000571028 OR10A2Q9H208 303 aa11.32□□□□□ -0.6
CCDC40-205ENST00000571028 METTL17Q9H7H0 456 aaPredicted RBP11.32□□□□□ -0.6
CCDC40-205ENST00000571028 NIPAL2Q9H841 368 aa11.32□□□□□ -0.6
CCDC40-205ENST00000571028 SP140LQ9H930 580 aa11.32□□□□□ -0.6
CCDC40-205ENST00000571028 MSL2Q9HCI7 577 aa11.32□□□□□ -0.6
CCDC40-205ENST00000571028 ZNF319Q9P2F9 582 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms