RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 ERVS71-1P61550 626 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 SEC61A1P61619 476 aaKnown RBP4.91□□□□□ -1.62
UBFD1-209ENST00000569919 GNG11P61952 73 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 GNB2P62879 340 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 PAX2Q02962 417 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 BST1Q10588 318 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 GAGE1Q13065 139 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 GAGE4Q13068 117 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 CHI3L2Q15782 390 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 MS4A18Q3C1V0 323 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 ZNF260Q3ZCT1 412 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 CCDC153Q494R4 210 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 MRPL2Q5T653 305 aaKnown RBP4.91□□□□□ -1.62
UBFD1-209ENST00000569919 IL23RQ5VWK5 629 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 TNFAIP8L2Q6P589 184 aaPredicted RBP4.91□□□□□ -1.62
UBFD1-209ENST00000569919 BRD3OSQ6XYD6 125 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 GDPGP1Q6ZNW5 385 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 LRRC74BQ6ZQY2 392 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 HMGN2P46Q86SG4 172 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 PTOV1Q86YD1 416 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 RIMKLAQ8IXN7 391 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 PEX5LQ8IYB4 626 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 CLEC4FQ8N1N0 589 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 MUC20Q8N307 709 aaPredicted RBP4.91□□□□□ -1.62
UBFD1-209ENST00000569919 CLIP4Q8N3C7 705 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 SLC22A24Q8N4F4 322 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 KRTCAP2Q8N6L1 136 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 ICA1LQ8NDH6 482 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 OR1J1Q8NGS3 322 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 PLEKHA8Q96JA3 519 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 SAMD8Q96LT4 415 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 CDRT15Q96T59 188 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 ULBP2Q9BZM5 246 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 OR51B6Q9H340 312 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 DPAGT1Q9H3H5 408 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 TUBB1Q9H4B7 451 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 ARMC7Q9H6L4 198 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 FN3KRPQ9HA64 309 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 TCF7L2Q9NQB0 619 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 TMEM106BQ9NUM4 274 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 B3GAT1Q9P2W7 334 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 EIF3KQ9UBQ5 218 aaKnown RBP4.91□□□□□ -1.62
UBFD1-209ENST00000569919 MIOXQ9UGB7 285 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 FIS1Q9Y3D6 152 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 DNAJC15Q9Y5T4 150 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 PRKDCP78527 4128 aaKnown RBP4.91□□□□□ -1.62
UBFD1-209ENST00000569919 PLXNB1O43157 2135 aa4.91□□□□□ -1.62
UBFD1-209ENST00000569919 LOC100653049A0A140TA62 436 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 PRSS51A0A1B0GVH4 220 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 HMGN4O00479 90 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 KRT34O76011 436 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 PATE4P0C8F1 98 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 CCL2P13500 99 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 CPA3P15088 417 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 RPS4Y1P22090 263 aaKnown RBP4.9□□□□□ -1.63
UBFD1-209ENST00000569919 AHCYP23526 432 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 APLNRP35414 380 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 CHI3L1P36222 383 aaPredicted RBP4.9□□□□□ -1.63
UBFD1-209ENST00000569919 TGFBR2P37173 567 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 MDH2P40926 338 aaKnown RBP4.9□□□□□ -1.63
UBFD1-209ENST00000569919 IER3P46695 156 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 CLDN8P56748 225 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 BTG1P62324 171 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 TNFAIP6P98066 277 aaPredicted RBP4.9□□□□□ -1.63
UBFD1-209ENST00000569919 GLO1Q04760 184 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 EGR4Q05215 589 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 C2orf54Q08AI8 447 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 FUT5Q11128 374 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 HERPUD1Q15011 391 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 SYPL1Q16563 259 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 UGT3A2Q3SY77 523 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 SLC36A2Q495M3 483 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 XKR7Q5GH72 579 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 DEFB121Q5J5C9 76 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 C6orf136Q5SQH8 315 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 THEM4Q5T1C6 240 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 ANXA8L1Q5VT79 327 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 OR4F3Q6IEY1 312 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 KRT77Q7Z794 578 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 ZER1Q7Z7L7 766 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 CLECL1Q8IZS7 167 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 ZNF283Q8N7M2 679 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 OR4A15Q8NGL6 344 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 FGFBP3Q8TAT2 258 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 SLC38A4Q969I6 547 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 C3orf30Q96M34 536 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 MAGEB18Q96M61 343 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 GFI1Q99684 422 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 EMC6Q9BV81 110 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 TRIM15Q9C019 465 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 PPIL3Q9H2H8 161 aaKnown RBP4.9□□□□□ -1.63
UBFD1-209ENST00000569919 SLC38A1Q9H2H9 487 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 RAD21L1Q9H4I0 556 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 TMEM165Q9HC07 324 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 ZDHHC18Q9NUE0 388 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 MARCOQ9UEW3 520 aaPredicted RBP4.9□□□□□ -1.63
UBFD1-209ENST00000569919 GIMAP2Q9UG22 337 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 TBK1Q9UHD2 729 aa4.9□□□□□ -1.63
UBFD1-209ENST00000569919 TET2Q6N021 2002 aaPredicted RBP4.89□□□□□ -1.63
UBFD1-209ENST00000569919 ZNF816-ZNF321PA0A0X1KG74 233 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms