RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 PLEKHA1Q9HB21 404 aa19.62■□□□□ 0.73
VCPKMT-205ENST00000569518 LDLRAD4O15165 306 aa19.62■□□□□ 0.73
VCPKMT-205ENST00000569518 LANCL1O43813 399 aa19.62■□□□□ 0.73
VCPKMT-205ENST00000569518 ERCC1P07992 297 aaPredicted RBP19.62■□□□□ 0.73
VCPKMT-205ENST00000569518 COX5BP10606 129 aa19.62■□□□□ 0.73
VCPKMT-205ENST00000569518 MNDAP41218 407 aa19.62■□□□□ 0.73
VCPKMT-205ENST00000569518 EFNB2P52799 333 aa19.62■□□□□ 0.73
VCPKMT-205ENST00000569518 NSUN5P2Q63ZY6 315 aa19.62■□□□□ 0.73
VCPKMT-205ENST00000569518 OR4D6Q8NGJ1 314 aa19.62■□□□□ 0.73
VCPKMT-205ENST00000569518 SORCS2Q96PQ0 1159 aa19.62■□□□□ 0.73
VCPKMT-205ENST00000569518 UQCC2Q9BRT2 126 aa19.62■□□□□ 0.73
VCPKMT-205ENST00000569518 THAP7Q9BT49 309 aaPredicted RBP19.62■□□□□ 0.73
VCPKMT-205ENST00000569518 C11orf54Q9H0W9 315 aaPredicted RBP19.62■□□□□ 0.73
VCPKMT-205ENST00000569518 LUZP4Q9P127 313 aa19.62■□□□□ 0.73
VCPKMT-205ENST00000569518 BOD1L1Q8NFC6 3051 aa19.62■□□□□ 0.73
VCPKMT-205ENST00000569518 PTPRQQ9UMZ3 2332 aa19.61■□□□□ 0.73
VCPKMT-205ENST00000569518 LOC100509620A0A075B734 347 aa19.61■□□□□ 0.73
VCPKMT-205ENST00000569518 TMEM272A0A1B0GTI8 110 aa19.61■□□□□ 0.73
VCPKMT-205ENST00000569518 DHRS7CA6NNS2 312 aa19.61■□□□□ 0.73
VCPKMT-205ENST00000569518 LCATP04180 440 aa19.61■□□□□ 0.73
VCPKMT-205ENST00000569518 TMIGD3P0DMS9 266 aaPredicted RBP19.61■□□□□ 0.73
VCPKMT-205ENST00000569518 CDK2P24941 298 aa19.61■□□□□ 0.73
VCPKMT-205ENST00000569518 THBS4P35443 961 aa19.61■□□□□ 0.73
VCPKMT-205ENST00000569518 ARR3P36575 388 aa19.61■□□□□ 0.73
VCPKMT-205ENST00000569518 KIR2DL2P43627 348 aaPredicted RBP19.61■□□□□ 0.73
VCPKMT-205ENST00000569518 PTH2RP49190 550 aa19.61■□□□□ 0.73
VCPKMT-205ENST00000569518 NRARPQ7Z6K4 114 aa19.61■□□□□ 0.73
VCPKMT-205ENST00000569518 DPPA2Q7Z7J5 298 aa19.61■□□□□ 0.73
VCPKMT-205ENST00000569518 BIVMQ86UB2 503 aa19.61■□□□□ 0.73
VCPKMT-205ENST00000569518 C19orf18Q8NEA5 215 aa19.61■□□□□ 0.73
VCPKMT-205ENST00000569518 EXTL1Q92935 676 aa19.61■□□□□ 0.73
VCPKMT-205ENST00000569518 RFT1Q96AA3 541 aa19.61■□□□□ 0.73
VCPKMT-205ENST00000569518 C10orf35Q96D05 121 aa19.61■□□□□ 0.73
VCPKMT-205ENST00000569518 CNTD2Q9H8S5 307 aa19.61■□□□□ 0.73
VCPKMT-205ENST00000569518 GTF3C1Q12789 2109 aa19.61■□□□□ 0.73
VCPKMT-205ENST00000569518 LINC00854A0A1B0GVQ3 168 aa19.6■□□□□ 0.73
VCPKMT-205ENST00000569518 GSTZ1O43708 216 aaPredicted RBP19.6■□□□□ 0.73
VCPKMT-205ENST00000569518 MTRF1O75570 445 aaKnown RBP19.6■□□□□ 0.73
VCPKMT-205ENST00000569518 OR2A2Q6IF42 318 aa19.6■□□□□ 0.73
VCPKMT-205ENST00000569518 COLCA1Q6ZS62 124 aa19.6■□□□□ 0.73
VCPKMT-205ENST00000569518 OR2AE1Q8NHA4 323 aa19.6■□□□□ 0.73
VCPKMT-205ENST00000569518 SSC4DQ8WTU2 575 aa19.6■□□□□ 0.73
VCPKMT-205ENST00000569518 YIPF5Q969M3 257 aa19.6■□□□□ 0.73
VCPKMT-205ENST00000569518 REEP6Q96HR9 211 aa19.6■□□□□ 0.73
VCPKMT-205ENST00000569518 ZFP3Q96NJ6 502 aa19.6■□□□□ 0.73
VCPKMT-205ENST00000569518 C1QTNF5Q9BXJ0 243 aa19.6■□□□□ 0.73
VCPKMT-205ENST00000569518 ZNF391Q9UJN7 358 aa19.6■□□□□ 0.73
VCPKMT-205ENST00000569518 MRPS7Q9Y2R9 242 aaKnown RBP19.6■□□□□ 0.73
VCPKMT-205ENST00000569518 IGKV1-9A0A0C4DH69 117 aa19.6■□□□□ 0.73
VCPKMT-205ENST00000569518 EEF1E1O43324 174 aaKnown RBP19.6■□□□□ 0.73
VCPKMT-205ENST00000569518 TPPPO94811 219 aa19.6■□□□□ 0.73
VCPKMT-205ENST00000569518 ARSBP15848 533 aa19.6■□□□□ 0.73
VCPKMT-205ENST00000569518 DGCR2P98153 550 aa19.6■□□□□ 0.73
VCPKMT-205ENST00000569518 HIKESHIQ53FT3 197 aa19.6■□□□□ 0.73
VCPKMT-205ENST00000569518 ZNF324BQ6AW86 544 aaPredicted RBP19.6■□□□□ 0.73
VCPKMT-205ENST00000569518 CCBE1Q6UXH8 406 aaPredicted RBP19.6■□□□□ 0.73
VCPKMT-205ENST00000569518 CDH26Q8IXH8 852 aa19.6■□□□□ 0.73
VCPKMT-205ENST00000569518 SMIM4Q8WVI0 70 aa19.6■□□□□ 0.73
VCPKMT-205ENST00000569518 CHST5Q9GZS9 411 aa19.6■□□□□ 0.73
VCPKMT-205ENST00000569518 RGCCQ9H4X1 137 aa19.6■□□□□ 0.73
VCPKMT-205ENST00000569518 CTAG2O75638 210 aa19.59■□□□□ 0.73
VCPKMT-205ENST00000569518 ALX3O95076 343 aa19.59■□□□□ 0.73
VCPKMT-205ENST00000569518 CNOT4O95628 575 aaKnown RBP19.59■□□□□ 0.73
VCPKMT-205ENST00000569518 CD79AP11912 226 aa19.59■□□□□ 0.73
VCPKMT-205ENST00000569518 FAHP16930 419 aa19.59■□□□□ 0.73
VCPKMT-205ENST00000569518 HOXD11P31277 338 aaPredicted RBP19.59■□□□□ 0.73
VCPKMT-205ENST00000569518 TMEM69Q5SWH9 247 aa19.59■□□□□ 0.73
VCPKMT-205ENST00000569518 ZNF585AQ6P3V2 769 aa19.59■□□□□ 0.73
VCPKMT-205ENST00000569518 UTS2BQ765I0 119 aa19.59■□□□□ 0.73
VCPKMT-205ENST00000569518 OR6K3Q8NGY3 331 aa19.59■□□□□ 0.73
VCPKMT-205ENST00000569518 PP6455Q8WZ26 134 aa19.59■□□□□ 0.73
VCPKMT-205ENST00000569518 PIGLQ9Y2B2 252 aa19.59■□□□□ 0.73
VCPKMT-205ENST00000569518 SVILO95425 2214 aa19.59■□□□□ 0.73
VCPKMT-205ENST00000569518 MBD3L4A6NDZ8 208 aaPredicted RBP19.58■□□□□ 0.73
VCPKMT-205ENST00000569518 MBD3L3A6NE82 208 aaPredicted RBP19.58■□□□□ 0.73
VCPKMT-205ENST00000569518 MBD3L5A6NJ08 208 aaPredicted RBP19.58■□□□□ 0.73
VCPKMT-205ENST00000569518 ALDOBP05062 364 aa19.58■□□□□ 0.73
VCPKMT-205ENST00000569518 EDN3P14138 238 aa19.58■□□□□ 0.73
VCPKMT-205ENST00000569518 ACKR3P25106 362 aa19.58■□□□□ 0.73
VCPKMT-205ENST00000569518 CAPZA1P52907 286 aa19.58■□□□□ 0.73
VCPKMT-205ENST00000569518 TMPRSS3P57727 454 aa19.58■□□□□ 0.73
VCPKMT-205ENST00000569518 RAB1AP62820 205 aa19.58■□□□□ 0.73
VCPKMT-205ENST00000569518 TNK1Q13470 666 aa19.58■□□□□ 0.73
VCPKMT-205ENST00000569518 HACD4Q5VWC8 232 aa19.58■□□□□ 0.73
VCPKMT-205ENST00000569518 TMEM53Q6P2H8 277 aa19.58■□□□□ 0.73
VCPKMT-205ENST00000569518 Q6ZT83 130 aa19.58■□□□□ 0.73
VCPKMT-205ENST00000569518 SEM1Q6ZVN7 128 aa19.58■□□□□ 0.73
VCPKMT-205ENST00000569518 ZNF584Q8IVC4 421 aa19.58■□□□□ 0.73
VCPKMT-205ENST00000569518 MBD3L2Q8NHZ7 208 aaPredicted RBP19.58■□□□□ 0.73
VCPKMT-205ENST00000569518 SLC22A4Q9H015 551 aa19.58■□□□□ 0.73
VCPKMT-205ENST00000569518 FUOMA2VDF0 154 aa19.58■□□□□ 0.72
VCPKMT-205ENST00000569518 XRCC3O43542 346 aa19.58■□□□□ 0.72
VCPKMT-205ENST00000569518 GABRA1P14867 456 aa19.58■□□□□ 0.72
VCPKMT-205ENST00000569518 IGHV1-2P23083 117 aa19.58■□□□□ 0.72
VCPKMT-205ENST00000569518 ZNF93P35789 620 aaPredicted RBP19.58■□□□□ 0.72
VCPKMT-205ENST00000569518 TBRG1Q3YBR2 411 aa19.58■□□□□ 0.72
VCPKMT-205ENST00000569518 KRTCAP3Q53RY4 240 aa19.58■□□□□ 0.72
VCPKMT-205ENST00000569518 RNF144BQ7Z419 303 aa19.58■□□□□ 0.72
VCPKMT-205ENST00000569518 CNEP1R1Q8N9A8 125 aa19.58■□□□□ 0.72
VCPKMT-205ENST00000569518 SPSB4Q96A44 273 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms