RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 U3KQA8 63 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 PHF3Q92576 2039 aaKnown RBP7.77□□□□□ -1.17
LINC00558-201ENST00000569422 A0A1W2PP11 408 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 TMEM82A0PJX8 343 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 ZNF98A6NK75 572 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 F5H5K5 113 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 COX5BP10606 129 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 ACHEP22303 614 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 BDKRB2P30411 391 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 PTGDSP41222 190 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 RGS19P49795 217 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 MAP2K6P52564 334 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 CXADRP78310 365 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 ESCO2Q56NI9 601 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 TOR2AQ5JU69 321 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 C3orf33Q6P1S2 294 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 TRAPPC6BQ86SZ2 158 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 ZNF584Q8IVC4 421 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 OR6N1Q8NGY5 312 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 LHFPL5Q8TAF8 219 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 GPX8Q8TED1 209 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 NICN1Q9BSH3 213 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 B3GNT2Q9NY97 397 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 SEMA5BQ9P283 1151 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 KLK13Q9UKR3 277 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 MAB21L2Q9Y586 359 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 GPR179Q6PRD1 2367 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 IGLV3-12A0A075B6K2 115 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 SERTM2A0A1B0GWG4 89 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 MEX3AA1L020 520 aaKnown RBP7.76□□□□□ -1.17
LINC00558-201ENST00000569422 XKRY2A2RUG3 117 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 C5orf63A6NC05 138 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 HSPB2A8KAH6 182 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 F5H5P2 479 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 MPIG6BO95866 241 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 IGHG1P01857 330 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 IGHMP01871 453 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 LPLP06858 475 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 HCKP08631 526 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 IGFBP3P17936 291 aaPredicted RBP7.76□□□□□ -1.17
LINC00558-201ENST00000569422 DLX5P56178 289 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 TAS2R19P59542 299 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 ACTBP60709 375 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 ACTG1P63261 375 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 HSPB2Q16082 182 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 TMEM81Q6P7N7 255 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 C5orf46Q6UWT4 87 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 SLC36A1Q7Z2H8 476 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 WDSUB1Q8N9V3 476 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 RNF133Q8WVZ7 376 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 SPACA9Q96E40 222 aaPredicted RBP7.76□□□□□ -1.17
LINC00558-201ENST00000569422 TMEM41AQ96HV5 264 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 ATP6V0BQ99437 205 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 SLC6A7Q99884 636 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 PDCD10Q9BUL8 212 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 TRAF4Q9BUZ4 470 aaPredicted RBP7.76□□□□□ -1.17
LINC00558-201ENST00000569422 SF3B5Q9BWJ5 86 aaKnown RBP7.76□□□□□ -1.17
LINC00558-201ENST00000569422 FAM206AQ9NX38 181 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 RDH8Q9NYR8 311 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 ZNF319Q9P2F9 582 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 SLC5A6Q9Y289 635 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 NOP16Q9Y3C1 178 aaKnown RBP7.76□□□□□ -1.17
LINC00558-201ENST00000569422 ARID1AO14497 2285 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 METTL21EPA6NDL7 271 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 SRSF10O75494 262 aaKnown RBP7.76□□□□□ -1.17
LINC00558-201ENST00000569422 SPDEFO95238 335 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 OR4E1P0C645 316 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 UBCP0CG48 685 aaKnown RBP7.76□□□□□ -1.17
LINC00558-201ENST00000569422 ZNF121P58317 390 aaPredicted RBP7.76□□□□□ -1.17
LINC00558-201ENST00000569422 RAP2BP61225 183 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 FAM166AQ6J272 317 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 TMEM156Q8N614 296 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 OR2M3Q8NG83 312 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 OR1M1Q8NGA1 313 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 MRGPRX4Q96LA9 322 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 POTEKPQ9BYX7 375 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 ELL3Q9HB65 397 aaPredicted RBP7.76□□□□□ -1.17
LINC00558-201ENST00000569422 TREM1Q9NP99 234 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 GPR84Q9NQS5 396 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 GLTPQ9NZD2 209 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 C19orf25Q9UFG5 118 aaPredicted RBP7.76□□□□□ -1.17
LINC00558-201ENST00000569422 PLEKHA6Q9Y2H5 1048 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 LHFPL6Q9Y693 200 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 NCOR1O75376 2440 aa7.76□□□□□ -1.17
LINC00558-201ENST00000569422 RALGAPA1Q6GYQ0 2036 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 AHRRA9YTQ3 701 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 LDLRAD4O15165 306 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 PMP2P02689 132 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 KLK3P07288 261 aaPredicted RBP7.75□□□□□ -1.17
LINC00558-201ENST00000569422 GIPP09681 153 aaPredicted RBP7.75□□□□□ -1.17
LINC00558-201ENST00000569422 AKR1C4P17516 323 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 ZNF93P35789 620 aaPredicted RBP7.75□□□□□ -1.17
LINC00558-201ENST00000569422 RPS18P62269 152 aaKnown RBP7.75□□□□□ -1.17
LINC00558-201ENST00000569422 ZP4Q12836 540 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 C3P1Q6ZMU1 363 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 KCTD9Q7L273 389 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.75□□□□□ -1.17
LINC00558-201ENST00000569422 OR5D14Q8NGL3 314 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 TTC9Q92623 222 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 THRSPQ92748 146 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms