RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 DDOSTP39656 456 aa24.65■■□□□ 1.54
RAB40C-211ENST00000568586 DAPP51397 102 aa24.65■■□□□ 1.54
RAB40C-211ENST00000568586 KLBQ86Z14 1044 aa24.65■■□□□ 1.54
RAB40C-211ENST00000568586 C1orf87Q8N0U7 546 aa24.65■■□□□ 1.54
RAB40C-211ENST00000568586 ZMYND19Q96E35 227 aaPredicted RBP24.65■■□□□ 1.54
RAB40C-211ENST00000568586 PAPOLBQ9NRJ5 636 aaKnown RBP24.65■■□□□ 1.54
RAB40C-211ENST00000568586 A0A0A6YYJ9 748 aa24.64■■□□□ 1.54
RAB40C-211ENST00000568586 GGT3PA6NGU5 568 aa24.64■■□□□ 1.54
RAB40C-211ENST00000568586 CEACAM18A8MTB9 384 aa24.64■■□□□ 1.54
RAB40C-211ENST00000568586 CX3CR1P49238 355 aa24.64■■□□□ 1.54
RAB40C-211ENST00000568586 CRISP1P54107 249 aa24.64■■□□□ 1.54
RAB40C-211ENST00000568586 OR8G1Q15617 311 aa24.64■■□□□ 1.54
RAB40C-211ENST00000568586 ATP6AP1Q15904 470 aa24.64■■□□□ 1.54
RAB40C-211ENST00000568586 TMEM236Q5W0B7 351 aa24.64■■□□□ 1.54
RAB40C-211ENST00000568586 SPATC1Q76KD6 591 aa24.64■■□□□ 1.54
RAB40C-211ENST00000568586 ZNF771Q7L3S4 317 aaPredicted RBP24.64■■□□□ 1.54
RAB40C-211ENST00000568586 OR5K1Q8NHB7 308 aa24.64■■□□□ 1.54
RAB40C-211ENST00000568586 SGK3Q96BR1 496 aa24.64■■□□□ 1.54
RAB40C-211ENST00000568586 TEX12Q9BXU0 123 aa24.64■■□□□ 1.54
RAB40C-211ENST00000568586 LOC105371242A0A075B767 164 aa24.63■■□□□ 1.53
RAB40C-211ENST00000568586 FSHBP01225 129 aa24.63■■□□□ 1.53
RAB40C-211ENST00000568586 SEC61A1P61619 476 aaKnown RBP24.63■■□□□ 1.53
RAB40C-211ENST00000568586 SPERTQ8NA61 448 aa24.63■■□□□ 1.53
RAB40C-211ENST00000568586 OR52H1Q8NGJ2 320 aa24.63■■□□□ 1.53
RAB40C-211ENST00000568586 C7orf69Q9H7B7 122 aa24.63■■□□□ 1.53
RAB40C-211ENST00000568586 ANK2Q01484 3957 aa24.62■■□□□ 1.53
RAB40C-211ENST00000568586 IGHV3-64DA0A0J9YX35 117 aa24.62■■□□□ 1.53
RAB40C-211ENST00000568586 HSD11B1P28845 292 aa24.62■■□□□ 1.53
RAB40C-211ENST00000568586 FAM3AP98173 230 aa24.62■■□□□ 1.53
RAB40C-211ENST00000568586 ZNF404Q494X3 552 aa24.62■■□□□ 1.53
RAB40C-211ENST00000568586 DEFB108BQ8NET1 73 aa24.62■■□□□ 1.53
RAB40C-211ENST00000568586 OR56B2PQ8NGI1 322 aa24.62■■□□□ 1.53
RAB40C-211ENST00000568586 MMP26Q9NRE1 261 aa24.62■■□□□ 1.53
RAB40C-211ENST00000568586 LRCH1Q9Y2L9 728 aa24.62■■□□□ 1.53
RAB40C-211ENST00000568586 TRAPPC2LH3BP13 241 aa24.61■■□□□ 1.53
RAB40C-211ENST00000568586 SELENOFO60613 162 aa24.61■■□□□ 1.53
RAB40C-211ENST00000568586 LYNP07948 512 aa24.61■■□□□ 1.53
RAB40C-211ENST00000568586 ESRRGP62508 458 aa24.61■■□□□ 1.53
RAB40C-211ENST00000568586 SRSF2Q01130 221 aaKnown RBP24.61■■□□□ 1.53
RAB40C-211ENST00000568586 MPPED2Q15777 294 aa24.61■■□□□ 1.53
RAB40C-211ENST00000568586 KLHL12Q53G59 568 aa24.61■■□□□ 1.53
RAB40C-211ENST00000568586 SLC16A9Q7RTY1 509 aa24.61■■□□□ 1.53
RAB40C-211ENST00000568586 BBS1Q8NFJ9 593 aa24.61■■□□□ 1.53
RAB40C-211ENST00000568586 PLEKHA8Q96JA3 519 aa24.61■■□□□ 1.53
RAB40C-211ENST00000568586 TMEM246Q9BRR3 403 aa24.61■■□□□ 1.53
RAB40C-211ENST00000568586 ADAT1Q9BUB4 502 aaKnown RBP24.61■■□□□ 1.53
RAB40C-211ENST00000568586 C19orf24Q9BVV8 132 aa24.61■■□□□ 1.53
RAB40C-211ENST00000568586 ZNF319Q9P2F9 582 aa24.61■■□□□ 1.53
RAB40C-211ENST00000568586 MIOXQ9UGB7 285 aa24.61■■□□□ 1.53
RAB40C-211ENST00000568586 PPIAL4AQ9Y536 164 aa24.61■■□□□ 1.53
RAB40C-211ENST00000568586 FAM20BO75063 409 aa24.6■■□□□ 1.53
RAB40C-211ENST00000568586 ANXA2P07355 339 aaKnown RBP24.6■■□□□ 1.53
RAB40C-211ENST00000568586 ZNF12P17014 697 aa24.6■■□□□ 1.53
RAB40C-211ENST00000568586 CFL1P23528 166 aaKnown RBP24.6■■□□□ 1.53
RAB40C-211ENST00000568586 ZNF121P58317 390 aaPredicted RBP24.6■■□□□ 1.53
RAB40C-211ENST00000568586 PTGES3Q15185 160 aaKnown RBP24.6■■□□□ 1.53
RAB40C-211ENST00000568586 ESCO2Q56NI9 601 aa24.6■■□□□ 1.53
RAB40C-211ENST00000568586 USP43Q70EL4 1123 aa24.6■■□□□ 1.53
RAB40C-211ENST00000568586 OR11L1Q8NGX0 322 aa24.6■■□□□ 1.53
RAB40C-211ENST00000568586 NANPQ8TBE9 248 aa24.6■■□□□ 1.53
RAB40C-211ENST00000568586 KIF17Q9P2E2 1029 aa24.6■■□□□ 1.53
RAB40C-211ENST00000568586 AP4S1Q9Y587 144 aa24.6■■□□□ 1.53
RAB40C-211ENST00000568586 ZNF205O95201 554 aa24.59■■□□□ 1.53
RAB40C-211ENST00000568586 H2BFMP0C1H6 154 aa24.59■■□□□ 1.53
RAB40C-211ENST00000568586 IRF2P14316 349 aa24.59■■□□□ 1.53
RAB40C-211ENST00000568586 ALOX5APP20292 161 aa24.59■■□□□ 1.53
RAB40C-211ENST00000568586 EFNB1P98172 346 aa24.59■■□□□ 1.53
RAB40C-211ENST00000568586 PAX2Q02962 417 aa24.59■■□□□ 1.53
RAB40C-211ENST00000568586 SNAPC1Q16533 368 aa24.59■■□□□ 1.53
RAB40C-211ENST00000568586 PRAMEF6Q5VXH4 476 aa24.59■■□□□ 1.53
RAB40C-211ENST00000568586 REEP6Q96HR9 211 aa24.59■■□□□ 1.53
RAB40C-211ENST00000568586 GABARAPL1Q9H0R8 117 aa24.59■■□□□ 1.53
RAB40C-211ENST00000568586 RGCCQ9H4X1 137 aa24.59■■□□□ 1.53
RAB40C-211ENST00000568586 FN3KRPQ9HA64 309 aa24.59■■□□□ 1.53
RAB40C-211ENST00000568586 TVP23BQ9NYZ1 205 aa24.59■■□□□ 1.53
RAB40C-211ENST00000568586 N6AMT1Q9Y5N5 214 aa24.59■■□□□ 1.53
RAB40C-211ENST00000568586 INSIG2Q9Y5U4 225 aa24.59■■□□□ 1.53
RAB40C-211ENST00000568586 hCG_38984A0A1B0GV85 526 aa24.58■■□□□ 1.53
RAB40C-211ENST00000568586 EPHA1P21709 976 aa24.58■■□□□ 1.53
RAB40C-211ENST00000568586 FASP25445 335 aa24.58■■□□□ 1.53
RAB40C-211ENST00000568586 ZNF154Q13106 437 aa24.58■■□□□ 1.53
RAB40C-211ENST00000568586 TIGD6Q17RP2 521 aa24.58■■□□□ 1.53
RAB40C-211ENST00000568586 FAM201AQ5SY85 155 aa24.58■■□□□ 1.53
RAB40C-211ENST00000568586 C1orf146Q5VVC0 180 aa24.58■■□□□ 1.53
RAB40C-211ENST00000568586 KDM4DQ6B0I6 523 aa24.58■■□□□ 1.53
RAB40C-211ENST00000568586 FAM57BQ71RH2 274 aa24.58■■□□□ 1.53
RAB40C-211ENST00000568586 THEM6Q8WUY1 208 aa24.58■■□□□ 1.53
RAB40C-211ENST00000568586 DACT3Q96B18 629 aaPredicted RBP24.58■■□□□ 1.53
RAB40C-211ENST00000568586 TEAD3Q99594 435 aa24.58■■□□□ 1.53
RAB40C-211ENST00000568586 YIPF3Q9GZM5 350 aa24.58■■□□□ 1.53
RAB40C-211ENST00000568586 OR10A2Q9H208 303 aa24.58■■□□□ 1.53
RAB40C-211ENST00000568586 NIPAL2Q9H841 368 aa24.58■■□□□ 1.53
RAB40C-211ENST00000568586 RNF7Q9UBF6 113 aa24.58■■□□□ 1.53
RAB40C-211ENST00000568586 KLHDC2Q9Y2U9 406 aa24.58■■□□□ 1.53
RAB40C-211ENST00000568586 FBN3Q75N90 2809 aa24.57■■□□□ 1.52
RAB40C-211ENST00000568586 G3V2T6 193 aa24.57■■□□□ 1.52
RAB40C-211ENST00000568586 TBX1O43435 398 aa24.57■■□□□ 1.52
RAB40C-211ENST00000568586 MZT1Q08AG7 82 aa24.57■■□□□ 1.52
RAB40C-211ENST00000568586 APOFQ13790 326 aa24.57■■□□□ 1.52
RAB40C-211ENST00000568586 TUSC1Q2TAM9 212 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms