RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 SLC9A3R2Q15599 337 aa15.53■□□□□ 0.08
LINC01238-205ENST00000567549 BCL6BQ8N143 479 aaPredicted RBP15.53■□□□□ 0.08
LINC01238-205ENST00000567549 FTMTQ8N4E7 242 aa15.53■□□□□ 0.08
LINC01238-205ENST00000567549 FAM71F1Q96KD3 344 aaPredicted RBP15.53■□□□□ 0.08
LINC01238-205ENST00000567549 DUX5Q96PT3 197 aa15.53■□□□□ 0.08
LINC01238-205ENST00000567549 TRIM15Q9C019 465 aa15.53■□□□□ 0.08
LINC01238-205ENST00000567549 MUC13Q9H3R2 512 aa15.53■□□□□ 0.08
LINC01238-205ENST00000567549 UNKLQ9H9P5 680 aaKnown RBP15.53■□□□□ 0.08
LINC01238-205ENST00000567549 UFSP2Q9NUQ7 469 aa15.53■□□□□ 0.08
LINC01238-205ENST00000567549 ANKRD30BLA7E2S9 258 aa15.52■□□□□ 0.08
LINC01238-205ENST00000567549 ZNF878C9JN71 531 aa15.52■□□□□ 0.08
LINC01238-205ENST00000567549 TNFRSF11BO00300 401 aa15.52■□□□□ 0.08
LINC01238-205ENST00000567549 ECDO95905 644 aaPredicted RBP15.52■□□□□ 0.08
LINC01238-205ENST00000567549 IGHV4-38-2P0DP08 117 aa15.52■□□□□ 0.08
LINC01238-205ENST00000567549 CA6P23280 308 aa15.52■□□□□ 0.08
LINC01238-205ENST00000567549 PSMB10P40306 273 aa15.52■□□□□ 0.08
LINC01238-205ENST00000567549 HMGA2P52926 109 aa15.52■□□□□ 0.08
LINC01238-205ENST00000567549 RPL15P61313 204 aaKnown RBP15.52■□□□□ 0.08
LINC01238-205ENST00000567549 GRB2P62993 217 aaKnown RBP15.52■□□□□ 0.08
LINC01238-205ENST00000567549 OR8B8Q15620 311 aa15.52■□□□□ 0.08
LINC01238-205ENST00000567549 RSPO1Q2MKA7 263 aaPredicted RBP15.52■□□□□ 0.08
LINC01238-205ENST00000567549 CLEC12AQ5QGZ9 265 aa15.52■□□□□ 0.08
LINC01238-205ENST00000567549 SLC35F1Q5T1Q4 408 aa15.52■□□□□ 0.08
LINC01238-205ENST00000567549 METTL11BQ5VVY1 283 aa15.52■□□□□ 0.08
LINC01238-205ENST00000567549 PGBD2Q6P3X8 592 aa15.52■□□□□ 0.08
LINC01238-205ENST00000567549 RASSF6Q6ZTQ3 369 aa15.52■□□□□ 0.08
LINC01238-205ENST00000567549 TMEM86BQ8N661 226 aa15.52■□□□□ 0.08
LINC01238-205ENST00000567549 OR10S1Q8NGN2 331 aa15.52■□□□□ 0.08
LINC01238-205ENST00000567549 ASB9Q96DX5 294 aa15.52■□□□□ 0.08
LINC01238-205ENST00000567549 KCNJ15Q99712 375 aa15.52■□□□□ 0.08
LINC01238-205ENST00000567549 PNRC2Q9NPJ4 139 aaKnown RBP15.52■□□□□ 0.08
LINC01238-205ENST00000567549 TBC1D23Q9NUY8 699 aa15.52■□□□□ 0.08
LINC01238-205ENST00000567549 IL20Q9NYY1 176 aa15.52■□□□□ 0.08
LINC01238-205ENST00000567549 IGHV3-64DA0A0J9YX35 117 aa15.51■□□□□ 0.07
LINC01238-205ENST00000567549 A6NLC8 198 aa15.51■□□□□ 0.07
LINC01238-205ENST00000567549 BHLHE40O14503 412 aa15.51■□□□□ 0.07
LINC01238-205ENST00000567549 TIPRLO75663 272 aa15.51■□□□□ 0.07
LINC01238-205ENST00000567549 CCNB2O95067 398 aa15.51■□□□□ 0.07
LINC01238-205ENST00000567549 PTBP3O95758 552 aaKnown RBP15.51■□□□□ 0.07
LINC01238-205ENST00000567549 OTX1P32242 354 aaPredicted RBP15.51■□□□□ 0.07
LINC01238-205ENST00000567549 ENTPD1P49961 510 aa15.51■□□□□ 0.07
LINC01238-205ENST00000567549 FGF12P61328 243 aa15.51■□□□□ 0.07
LINC01238-205ENST00000567549 GK3PQ14409 553 aa15.51■□□□□ 0.07
LINC01238-205ENST00000567549 PDCD1Q15116 288 aa15.51■□□□□ 0.07
LINC01238-205ENST00000567549 SPATC1Q76KD6 591 aa15.51■□□□□ 0.07
LINC01238-205ENST00000567549 DCXRQ7Z4W1 244 aa15.51■□□□□ 0.07
LINC01238-205ENST00000567549 OR2T33Q8NG76 320 aa15.51■□□□□ 0.07
LINC01238-205ENST00000567549 OR8S1Q8NH09 359 aa15.51■□□□□ 0.07
LINC01238-205ENST00000567549 OR4F5Q8NH21 305 aa15.51■□□□□ 0.07
LINC01238-205ENST00000567549 GATAD2BQ8WXI9 593 aa15.51■□□□□ 0.07
LINC01238-205ENST00000567549 DACT3Q96B18 629 aaPredicted RBP15.51■□□□□ 0.07
LINC01238-205ENST00000567549 CCDC124Q96CT7 223 aaKnown RBP15.51■□□□□ 0.07
LINC01238-205ENST00000567549 MAP6Q96JE9 813 aa15.51■□□□□ 0.07
LINC01238-205ENST00000567549 ZNF48Q96MX3 618 aaPredicted RBP15.51■□□□□ 0.07
LINC01238-205ENST00000567549 FN3KQ9H479 309 aa15.51■□□□□ 0.07
LINC01238-205ENST00000567549 TOR3AQ9H497 397 aa15.51■□□□□ 0.07
LINC01238-205ENST00000567549 PRDM13Q9H4Q3 707 aa15.51■□□□□ 0.07
LINC01238-205ENST00000567549 BEX1Q9HBH7 125 aa15.51■□□□□ 0.07
LINC01238-205ENST00000567549 MRPL22Q9NWU5 206 aaKnown RBP15.51■□□□□ 0.07
LINC01238-205ENST00000567549 MMP24Q9Y5R2 645 aa15.51■□□□□ 0.07
LINC01238-205ENST00000567549 POMT1Q9Y6A1 747 aa15.51■□□□□ 0.07
LINC01238-205ENST00000567549 OOEPA6NGQ2 149 aa15.5■□□□□ 0.07
LINC01238-205ENST00000567549 SRRM5B3KS81 715 aa15.5■□□□□ 0.07
LINC01238-205ENST00000567549 ZNF879B4DU55 563 aa15.5■□□□□ 0.07
LINC01238-205ENST00000567549 TOX4O94842 621 aa15.5■□□□□ 0.07
LINC01238-205ENST00000567549 HSD11B1P28845 292 aa15.5■□□□□ 0.07
LINC01238-205ENST00000567549 FLOT2Q14254 428 aa15.5■□□□□ 0.07
LINC01238-205ENST00000567549 PRAMEF6Q5VXH4 476 aa15.5■□□□□ 0.07
LINC01238-205ENST00000567549 LNX2Q8N448 690 aa15.5■□□□□ 0.07
LINC01238-205ENST00000567549 RNPEPL1Q9HAU8 725 aa15.5■□□□□ 0.07
LINC01238-205ENST00000567549 ACTR3BQ9P1U1 418 aa15.5■□□□□ 0.07
LINC01238-205ENST00000567549 COMMD3-BMI1R4GMX3 469 aa15.5■□□□□ 0.07
LINC01238-205ENST00000567549 IGHV3OR16-10A0A075B7F0 116 aa15.49■□□□□ 0.07
LINC01238-205ENST00000567549 hCG_1807616A0A1W2PRN6 198 aa15.49■□□□□ 0.07
LINC01238-205ENST00000567549 RIIAD1A6NNX1 92 aa15.49■□□□□ 0.07
LINC01238-205ENST00000567549 ADAM20O43506 726 aa15.49■□□□□ 0.07
LINC01238-205ENST00000567549 SPARCP09486 303 aa15.49■□□□□ 0.07
LINC01238-205ENST00000567549 ZNF3P17036 446 aa15.49■□□□□ 0.07
LINC01238-205ENST00000567549 PMELP40967 661 aa15.49■□□□□ 0.07
LINC01238-205ENST00000567549 ZNF92Q03936 586 aa15.49■□□□□ 0.07
LINC01238-205ENST00000567549 TEX30Q5JUR7 227 aa15.49■□□□□ 0.07
LINC01238-205ENST00000567549 C17orf107Q6ZR85 190 aa15.49■□□□□ 0.07
LINC01238-205ENST00000567549 RHOUQ7L0Q8 258 aa15.49■□□□□ 0.07
LINC01238-205ENST00000567549 OR52H1Q8NGJ2 320 aa15.49■□□□□ 0.07
LINC01238-205ENST00000567549 TBC1D15Q8TC07 691 aa15.49■□□□□ 0.07
LINC01238-205ENST00000567549 SSMEM1Q8WWF3 244 aa15.49■□□□□ 0.07
LINC01238-205ENST00000567549 TMIGD2Q96BF3 282 aa15.49■□□□□ 0.07
LINC01238-205ENST00000567549 SLAMF6Q96DU3 332 aa15.49■□□□□ 0.07
LINC01238-205ENST00000567549 DMRTB1Q96MA1 342 aa15.49■□□□□ 0.07
LINC01238-205ENST00000567549 C1orf147Q96MC9 270 aaPredicted RBP15.49■□□□□ 0.07
LINC01238-205ENST00000567549 PCGF1Q9BSM1 259 aa15.49■□□□□ 0.07
LINC01238-205ENST00000567549 MAGIXQ9H6Y5 334 aa15.49■□□□□ 0.07
LINC01238-205ENST00000567549 EGLN3Q9H6Z9 239 aa15.49■□□□□ 0.07
LINC01238-205ENST00000567549 ABCB9Q9NP78 766 aa15.49■□□□□ 0.07
LINC01238-205ENST00000567549 CENPMQ9NSP4 180 aa15.49■□□□□ 0.07
LINC01238-205ENST00000567549 C1orf123Q9NWV4 160 aa15.49■□□□□ 0.07
LINC01238-205ENST00000567549 CAB39Q9Y376 341 aaPredicted RBP15.49■□□□□ 0.07
LINC01238-205ENST00000567549 LYVE1Q9Y5Y7 322 aa15.49■□□□□ 0.07
LINC01238-205ENST00000567549 ACOT8O14734 319 aa15.48■□□□□ 0.07
LINC01238-205ENST00000567549 HOXA3O43365 443 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms