RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 GHRLQ9UBU3 117 aa19.19■□□□□ 0.66
SPSB3-208ENST00000566339 C13orf42A0A1B0GVH6 325 aa19.18■□□□□ 0.66
SPSB3-208ENST00000566339 PRKNO60260 465 aaPredicted RBP19.18■□□□□ 0.66
SPSB3-208ENST00000566339 CA11O75493 328 aa19.18■□□□□ 0.66
SPSB3-208ENST00000566339 MPZL1O95297 269 aa19.18■□□□□ 0.66
SPSB3-208ENST00000566339 APOC1P02654 83 aa19.18■□□□□ 0.66
SPSB3-208ENST00000566339 HIST1H1DP16402 221 aaKnown RBP19.18■□□□□ 0.66
SPSB3-208ENST00000566339 ZNF93P35789 620 aaPredicted RBP19.18■□□□□ 0.66
SPSB3-208ENST00000566339 GNALP38405 381 aa19.18■□□□□ 0.66
SPSB3-208ENST00000566339 HMGN3Q15651 99 aa19.18■□□□□ 0.66
SPSB3-208ENST00000566339 MST1LQ2TV78 715 aa19.18■□□□□ 0.66
SPSB3-208ENST00000566339 RTL6Q6ICC9 239 aa19.18■□□□□ 0.66
SPSB3-208ENST00000566339 LHFPL1Q86WI0 220 aa19.18■□□□□ 0.66
SPSB3-208ENST00000566339 OR56B1Q8NGI3 324 aa19.18■□□□□ 0.66
SPSB3-208ENST00000566339 OR4A4PQ8NGN8 299 aa19.18■□□□□ 0.66
SPSB3-208ENST00000566339 KLHDC7BQ96G42 594 aa19.18■□□□□ 0.66
SPSB3-208ENST00000566339 RNF122Q9H9V4 155 aa19.18■□□□□ 0.66
SPSB3-208ENST00000566339 CHST11Q9NPF2 352 aa19.18■□□□□ 0.66
SPSB3-208ENST00000566339 COA4Q9NYJ1 87 aa19.18■□□□□ 0.66
SPSB3-208ENST00000566339 PIAS3Q9Y6X2 628 aa19.18■□□□□ 0.66
SPSB3-208ENST00000566339 A0A1W2PNV4 684 aa19.17■□□□□ 0.66
SPSB3-208ENST00000566339 CSTBP04080 98 aaKnown RBP19.17■□□□□ 0.66
SPSB3-208ENST00000566339 GNB3P16520 340 aa19.17■□□□□ 0.66
SPSB3-208ENST00000566339 IL15RAQ13261 267 aa19.17■□□□□ 0.66
SPSB3-208ENST00000566339 C1orf61Q13536 156 aa19.17■□□□□ 0.66
SPSB3-208ENST00000566339 PPA1Q15181 289 aa19.17■□□□□ 0.66
SPSB3-208ENST00000566339 C17orf82Q86X59 251 aaPredicted RBP19.17■□□□□ 0.66
SPSB3-208ENST00000566339 GKN2Q86XP6 184 aa19.17■□□□□ 0.66
SPSB3-208ENST00000566339 ANGPTL5Q86XS5 388 aa19.17■□□□□ 0.66
SPSB3-208ENST00000566339 METTL27Q8N6F8 245 aaPredicted RBP19.17■□□□□ 0.66
SPSB3-208ENST00000566339 TSLPQ969D9 159 aa19.17■□□□□ 0.66
SPSB3-208ENST00000566339 ZDHHC12Q96GR4 267 aa19.17■□□□□ 0.66
SPSB3-208ENST00000566339 NKX3-1Q99801 234 aaPredicted RBP19.17■□□□□ 0.66
SPSB3-208ENST00000566339 NRIP2Q9BQI9 281 aa19.17■□□□□ 0.66
SPSB3-208ENST00000566339 URM1Q9BTM9 101 aaKnown RBP19.17■□□□□ 0.66
SPSB3-208ENST00000566339 TREM1Q9NP99 234 aa19.17■□□□□ 0.66
SPSB3-208ENST00000566339 RCC2Q9P258 522 aaKnown RBP19.17■□□□□ 0.66
SPSB3-208ENST00000566339 H0YIZ8 118 aa19.16■□□□□ 0.66
SPSB3-208ENST00000566339 H3BMH7 237 aa19.16■□□□□ 0.66
SPSB3-208ENST00000566339 SIGLEC5O15389 551 aa19.16■□□□□ 0.66
SPSB3-208ENST00000566339 ZNF20P17024 532 aa19.16■□□□□ 0.66
SPSB3-208ENST00000566339 ARHGDIBP52566 201 aa19.16■□□□□ 0.66
SPSB3-208ENST00000566339 TAS2R46P59540 309 aa19.16■□□□□ 0.66
SPSB3-208ENST00000566339 HSF1Q00613 529 aa19.16■□□□□ 0.66
SPSB3-208ENST00000566339 SIGLEC14Q08ET2 396 aa19.16■□□□□ 0.66
SPSB3-208ENST00000566339 ZNF542PQ5EBM4 170 aa19.16■□□□□ 0.66
SPSB3-208ENST00000566339 ZNF585AQ6P3V2 769 aa19.16■□□□□ 0.66
SPSB3-208ENST00000566339 ADPRHL1Q8NDY3 354 aa19.16■□□□□ 0.66
SPSB3-208ENST00000566339 TMEM230Q96A57 120 aa19.16■□□□□ 0.66
SPSB3-208ENST00000566339 CMBLQ96DG6 245 aa19.16■□□□□ 0.66
SPSB3-208ENST00000566339 RAB3CQ96E17 227 aa19.16■□□□□ 0.66
SPSB3-208ENST00000566339 ADAT3Q96EY9 351 aaPredicted RBP19.16■□□□□ 0.66
SPSB3-208ENST00000566339 SLC5A7Q9GZV3 580 aa19.16■□□□□ 0.66
SPSB3-208ENST00000566339 TLNRD1Q9H1K6 362 aa19.16■□□□□ 0.66
SPSB3-208ENST00000566339 C5orf66Q9H5L9 145 aa19.16■□□□□ 0.66
SPSB3-208ENST00000566339 CENPMQ9NSP4 180 aa19.16■□□□□ 0.66
SPSB3-208ENST00000566339 MYEF2Q9P2K5 600 aaKnown RBP19.16■□□□□ 0.66
SPSB3-208ENST00000566339 B3GALT5Q9Y2C3 310 aa19.16■□□□□ 0.66
SPSB3-208ENST00000566339 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.16■□□□□ 0.66
SPSB3-208ENST00000566339 ETV2O00321 342 aaPredicted RBP19.16■□□□□ 0.66
SPSB3-208ENST00000566339 LMX1BO60663 402 aa19.16■□□□□ 0.66
SPSB3-208ENST00000566339 PMP2P02689 132 aa19.16■□□□□ 0.66
SPSB3-208ENST00000566339 CCL1P22362 96 aa19.16■□□□□ 0.66
SPSB3-208ENST00000566339 HSD11B2P80365 405 aa19.16■□□□□ 0.66
SPSB3-208ENST00000566339 FOXK1P85037 733 aa19.16■□□□□ 0.66
SPSB3-208ENST00000566339 TMED6Q8WW62 240 aa19.16■□□□□ 0.66
SPSB3-208ENST00000566339 DDIT4LQ96D03 193 aa19.16■□□□□ 0.66
SPSB3-208ENST00000566339 OR5B2Q96R09 309 aa19.16■□□□□ 0.66
SPSB3-208ENST00000566339 SLC26A1Q9H2B4 701 aa19.16■□□□□ 0.66
SPSB3-208ENST00000566339 CTSFQ9UBX1 484 aa19.16■□□□□ 0.66
SPSB3-208ENST00000566339 FBXO9Q9UK97 447 aaPredicted RBP19.16■□□□□ 0.66
SPSB3-208ENST00000566339 C19orf67A6NJJ6 358 aa19.15■□□□□ 0.66
SPSB3-208ENST00000566339 ZNF705EA8MWA4 302 aaPredicted RBP19.15■□□□□ 0.66
SPSB3-208ENST00000566339 GAPDHP04406 335 aaKnown RBP19.15■□□□□ 0.66
SPSB3-208ENST00000566339 THEM4Q5T1C6 240 aa19.15■□□□□ 0.66
SPSB3-208ENST00000566339 OTPQ5XKR4 325 aa19.15■□□□□ 0.66
SPSB3-208ENST00000566339 CLEC18BQ6UXF7 455 aa19.15■□□□□ 0.66
SPSB3-208ENST00000566339 TMPRSS9Q7Z410 1059 aa19.15■□□□□ 0.66
SPSB3-208ENST00000566339 POC1AQ8NBT0 407 aa19.15■□□□□ 0.66
SPSB3-208ENST00000566339 OR5H2Q8NGV7 314 aa19.15■□□□□ 0.66
SPSB3-208ENST00000566339 C11orf40Q8WZ69 217 aa19.15■□□□□ 0.66
SPSB3-208ENST00000566339 RRNAD1Q96FB5 475 aaKnown RBP19.15■□□□□ 0.66
SPSB3-208ENST00000566339 RHOFQ9HBH0 211 aa19.15■□□□□ 0.66
SPSB3-208ENST00000566339 ALKBH4Q9NXW9 302 aa19.15■□□□□ 0.66
SPSB3-208ENST00000566339 MRPS28Q9Y2Q9 187 aaKnown RBP19.15■□□□□ 0.66
SPSB3-208ENST00000566339 KIF26BQ2KJY2 2108 aa19.14■□□□□ 0.66
SPSB3-208ENST00000566339 LOC100509620A0A075B734 347 aa19.14■□□□□ 0.66
SPSB3-208ENST00000566339 ADAM10O14672 748 aa19.14■□□□□ 0.66
SPSB3-208ENST00000566339 SMAD9O15198 467 aaKnown RBP19.14■□□□□ 0.66
SPSB3-208ENST00000566339 GLULP15104 373 aa19.14■□□□□ 0.66
SPSB3-208ENST00000566339 LAP3P28838 519 aa19.14■□□□□ 0.66
SPSB3-208ENST00000566339 SULT1A2P50226 295 aa19.14■□□□□ 0.66
SPSB3-208ENST00000566339 C17orf67Q0P5P2 114 aa19.14■□□□□ 0.66
SPSB3-208ENST00000566339 LINC00346Q8IVM7 164 aa19.14■□□□□ 0.66
SPSB3-208ENST00000566339 COMMD1Q8N668 190 aa19.14■□□□□ 0.66
SPSB3-208ENST00000566339 EMG1Q92979 244 aaKnown RBP19.14■□□□□ 0.66
SPSB3-208ENST00000566339 PHF7Q9BWX1 381 aaPredicted RBP19.14■□□□□ 0.66
SPSB3-208ENST00000566339 EGLN1Q9GZT9 426 aa19.14■□□□□ 0.66
SPSB3-208ENST00000566339 ACKR4Q9NPB9 350 aa19.14■□□□□ 0.66
SPSB3-208ENST00000566339 PARP11Q9NR21 331 aa19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms