RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 IGHV3-74A0A0B4J1X5 117 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 PINLYPA6NC86 204 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 CENPXA8MT69 81 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 H7C417 338 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 NDUFS8O00217 210 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 KDELR3O43731 214 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 CDC40O60508 579 aaKnown RBP eCLIP3.35□□□□□ -1.87
CNOT1-209ENST00000566240 SLC19A2O60779 497 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 HLA-DPB1P04440 258 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 HOXB8P17481 243 aaPredicted RBP3.35□□□□□ -1.87
CNOT1-209ENST00000566240 CSNK1A1P48729 337 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 FABP6P51161 128 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 P2RX1P51575 399 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 PPP1CBP62140 327 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 TFDP2Q14188 446 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 ZNF266Q14584 549 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 GCSAMLQ5JQS6 135 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 CYB5R2Q6BCY4 276 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 SLC25A25Q6KCM7 469 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 RWDD4Q6NW29 188 aaKnown RBP3.35□□□□□ -1.87
CNOT1-209ENST00000566240 LINC00336Q6ZUF6 198 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 SLC35D2Q76EJ3 337 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 DUSP18Q8NEJ0 188 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 OR5AR1Q8NGP9 310 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 ZFP90Q8TF47 636 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 NTAN1Q96AB6 310 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 MRGPRFQ96AM1 343 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 CIDECQ96AQ7 238 aaPredicted RBP3.35□□□□□ -1.87
CNOT1-209ENST00000566240 LRRC39Q96DD0 335 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 RNF145Q96MT1 663 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 GPR21Q99679 349 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 TMEM175Q9BSA9 504 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 HAUS4Q9H6D7 363 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 MTFP1Q9UDX5 166 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 STK38LQ9Y2H1 464 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 SHPRHQ149N8 1683 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 FAM135BQ49AJ0 1406 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 MED14O60244 1454 aa3.35□□□□□ -1.87
CNOT1-209ENST00000566240 SLIT1O75093 1534 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 XRN1Q8IZH2 1706 aaKnown RBP3.34□□□□□ -1.87
CNOT1-209ENST00000566240 SYCE1LA8MT33 242 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 H3BN98 237 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 KLK1P06870 262 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 IVLP07476 585 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 HOXC4P09017 264 aaPredicted RBP3.34□□□□□ -1.87
CNOT1-209ENST00000566240 CD3GP09693 182 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 PGA5P0DJD9 388 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 ADRB3P13945 408 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 TCP1P17987 556 aaKnown RBP3.34□□□□□ -1.87
CNOT1-209ENST00000566240 GABRG2P18507 467 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 RAB3AP20336 220 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 RAB5AP20339 215 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 CSKP41240 450 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 CLDN6P56747 220 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 UBE2NP61088 152 aaKnown RBP3.34□□□□□ -1.87
CNOT1-209ENST00000566240 RPS23P62266 143 aaKnown RBP3.34□□□□□ -1.87
CNOT1-209ENST00000566240 PRR3P79522 188 aaKnown RBP3.34□□□□□ -1.87
CNOT1-209ENST00000566240 XIAPP98170 497 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 SLC39A6Q13433 755 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 DGCR6Q14129 220 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 PON2Q15165 354 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 C2orf83Q53S99 150 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 ASCL4Q6XD76 172 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 OR2W3Q7Z3T1 314 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 PCP2Q8IVA1 136 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 PRSS58Q8IYP2 241 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 FAM58AQ8N1B3 248 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 ARHGAP18Q8N392 663 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 CSGALNACT2Q8N6G5 542 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 METTL13Q8N6R0 699 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 ARIH2OSQ8N7S6 290 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 Q8N976 141 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 C11orf72Q8NBR9 251 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 EXOSC8Q96B26 276 aaKnown RBP3.34□□□□□ -1.87
CNOT1-209ENST00000566240 ZNF681Q96N22 645 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 UQCC2Q9BRT2 126 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 AGMATQ9BSE5 352 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 CHAC1Q9BUX1 264 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 IFI27L2Q9H2X8 130 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 EDA2RQ9HAV5 297 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 SLC40A1Q9NP59 571 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 CELA1Q9UNI1 258 aa3.34□□□□□ -1.87
CNOT1-209ENST00000566240 MN1Q10571 1320 aaPredicted RBP3.34□□□□□ -1.87
CNOT1-209ENST00000566240 ABCC11Q96J66 1382 aa3.34□□□□□ -1.88
CNOT1-209ENST00000566240 ZNFX1Q9P2E3 1918 aaKnown RBP3.34□□□□□ -1.88
CNOT1-209ENST00000566240 TMEM2Q9UHN6 1383 aa3.34□□□□□ -1.88
CNOT1-209ENST00000566240 TECPR2O15040 1411 aa3.34□□□□□ -1.88
CNOT1-209ENST00000566240 EDC4Q6P2E9 1401 aaKnown RBP3.34□□□□□ -1.88
CNOT1-209ENST00000566240 CROCCQ5TZA2 2017 aa3.34□□□□□ -1.88
CNOT1-209ENST00000566240 NRKQ7Z2Y5 1582 aa3.34□□□□□ -1.88
CNOT1-209ENST00000566240 KIF1AQ12756 1690 aa3.33□□□□□ -1.88
CNOT1-209ENST00000566240 TP53BP1Q12888 1972 aaPredicted RBP3.33□□□□□ -1.88
CNOT1-209ENST00000566240 IGHV3-66A0A0C4DH42 116 aa3.33□□□□□ -1.88
CNOT1-209ENST00000566240 A0A1W2PRF3 423 aa3.33□□□□□ -1.88
CNOT1-209ENST00000566240 A0A1W2PRM7 423 aa3.33□□□□□ -1.88
CNOT1-209ENST00000566240 WI2-2373I1.2A0A1W2PRP0 233 aa3.33□□□□□ -1.88
CNOT1-209ENST00000566240 C11orf94C9JXX5 98 aa3.33□□□□□ -1.88
CNOT1-209ENST00000566240 ANKRD65E5RJM6 399 aa3.33□□□□□ -1.88
CNOT1-209ENST00000566240 INS-IGF2F8WCM5 200 aa3.33□□□□□ -1.88
CNOT1-209ENST00000566240 H0Y9J4 135 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms