RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 PHYHO14832 338 aa11.72□□□□□ -0.53
HERPUD1-210ENST00000565966 TBX1O43435 398 aa11.72□□□□□ -0.53
HERPUD1-210ENST00000565966 XRCC2O43543 280 aa11.72□□□□□ -0.53
HERPUD1-210ENST00000565966 TNFRSF1AP19438 455 aa11.72□□□□□ -0.53
HERPUD1-210ENST00000565966 PSMA6P60900 246 aaKnown RBP11.72□□□□□ -0.53
HERPUD1-210ENST00000565966 CXCR4P61073 352 aa11.72□□□□□ -0.53
HERPUD1-210ENST00000565966 SLC34A1Q06495 639 aa11.72□□□□□ -0.53
HERPUD1-210ENST00000565966 POU4F2Q12837 409 aa11.72□□□□□ -0.53
HERPUD1-210ENST00000565966 ZNF322Q6U7Q0 402 aaPredicted RBP11.72□□□□□ -0.53
HERPUD1-210ENST00000565966 PGAP1Q75T13 922 aa11.72□□□□□ -0.53
HERPUD1-210ENST00000565966 MRPL21Q7Z2W9 205 aaKnown RBP11.72□□□□□ -0.53
HERPUD1-210ENST00000565966 ZNF679Q8IYX0 411 aa11.72□□□□□ -0.53
HERPUD1-210ENST00000565966 CCL17Q92583 94 aa11.72□□□□□ -0.53
HERPUD1-210ENST00000565966 SPSB4Q96A44 273 aa11.72□□□□□ -0.53
HERPUD1-210ENST00000565966 SGK3Q96BR1 496 aa11.72□□□□□ -0.53
HERPUD1-210ENST00000565966 POM121Q96HA1 1249 aa11.72□□□□□ -0.53
HERPUD1-210ENST00000565966 TBX5Q99593 518 aa11.72□□□□□ -0.53
HERPUD1-210ENST00000565966 MROQ9BYG7 248 aa11.72□□□□□ -0.53
HERPUD1-210ENST00000565966 RNPEPL1Q9HAU8 725 aa11.72□□□□□ -0.53
HERPUD1-210ENST00000565966 BRD7Q9NPI1 651 aa11.72□□□□□ -0.53
HERPUD1-210ENST00000565966 IL19Q9UHD0 177 aa11.72□□□□□ -0.53
HERPUD1-210ENST00000565966 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.72□□□□□ -0.53
HERPUD1-210ENST00000565966 CLDN25C9JDP6 229 aa11.71□□□□□ -0.53
HERPUD1-210ENST00000565966 MAGEB4O15481 346 aaPredicted RBP11.71□□□□□ -0.53
HERPUD1-210ENST00000565966 MPZL2O60487 215 aa11.71□□□□□ -0.53
HERPUD1-210ENST00000565966 ZNF254O75437 659 aa11.71□□□□□ -0.53
HERPUD1-210ENST00000565966 OR2T7P0C7T2 308 aa11.71□□□□□ -0.53
HERPUD1-210ENST00000565966 ATP6V1E1P36543 226 aa11.71□□□□□ -0.53
HERPUD1-210ENST00000565966 MTNR1AP48039 350 aa11.71□□□□□ -0.53
HERPUD1-210ENST00000565966 ADARB1P78563 741 aaKnown RBP11.71□□□□□ -0.53
HERPUD1-210ENST00000565966 SLC3A1Q07837 685 aa11.71□□□□□ -0.53
HERPUD1-210ENST00000565966 SPRNQ5BIV9 151 aa11.71□□□□□ -0.53
HERPUD1-210ENST00000565966 SSX6Q7RTT6 188 aa11.71□□□□□ -0.53
HERPUD1-210ENST00000565966 DHRSXQ8N5I4 330 aa11.71□□□□□ -0.53
HERPUD1-210ENST00000565966 BHLHE23Q8NDY6 225 aa11.71□□□□□ -0.53
HERPUD1-210ENST00000565966 OR52H1Q8NGJ2 320 aa11.71□□□□□ -0.53
HERPUD1-210ENST00000565966 OR2T27Q8NH04 317 aa11.71□□□□□ -0.53
HERPUD1-210ENST00000565966 CYGBQ8WWM9 190 aa11.71□□□□□ -0.53
HERPUD1-210ENST00000565966 MSI2Q96DH6 328 aaKnown RBP11.71□□□□□ -0.53
HERPUD1-210ENST00000565966 RNFT2Q96EX2 444 aa11.71□□□□□ -0.53
HERPUD1-210ENST00000565966 TIMD4Q96H15 378 aa11.71□□□□□ -0.53
HERPUD1-210ENST00000565966 PGAM5Q96HS1 289 aa11.71□□□□□ -0.53
HERPUD1-210ENST00000565966 APOL4Q9BPW4 351 aa11.71□□□□□ -0.53
HERPUD1-210ENST00000565966 SLC30A2Q9BRI3 323 aa11.71□□□□□ -0.53
HERPUD1-210ENST00000565966 TMEM100Q9NV29 134 aa11.71□□□□□ -0.53
HERPUD1-210ENST00000565966 TREM2Q9NZC2 230 aa11.71□□□□□ -0.53
HERPUD1-210ENST00000565966 IKZF2Q9UKS7 526 aa11.71□□□□□ -0.53
HERPUD1-210ENST00000565966 CACNG2Q9Y698 323 aa11.71□□□□□ -0.53
HERPUD1-210ENST00000565966 ANK3Q12955 4377 aaKnown RBP11.71□□□□□ -0.54
HERPUD1-210ENST00000565966 LOC100289279A0A1B0GTE1 492 aa11.7□□□□□ -0.54
HERPUD1-210ENST00000565966 A0A1B0GWJ7 208 aa11.7□□□□□ -0.54
HERPUD1-210ENST00000565966 A0A1W2PQL4 384 aaPredicted RBP11.7□□□□□ -0.54
HERPUD1-210ENST00000565966 GGT3PA6NGU5 568 aa11.7□□□□□ -0.54
HERPUD1-210ENST00000565966 CD300LBA8K4G0 201 aa11.7□□□□□ -0.54
HERPUD1-210ENST00000565966 H0YL77 283 aa11.7□□□□□ -0.54
HERPUD1-210ENST00000565966 LMX1BO60663 402 aa11.7□□□□□ -0.54
HERPUD1-210ENST00000565966 CLIC3O95833 236 aa11.7□□□□□ -0.54
HERPUD1-210ENST00000565966 TGFAP01135 160 aa11.7□□□□□ -0.54
HERPUD1-210ENST00000565966 ZNF16P17020 682 aaPredicted RBP11.7□□□□□ -0.54
HERPUD1-210ENST00000565966 IL2RGP31785 369 aa11.7□□□□□ -0.54
HERPUD1-210ENST00000565966 DCTDP32321 178 aa11.7□□□□□ -0.54
HERPUD1-210ENST00000565966 RIDAP52758 137 aaKnown RBP11.7□□□□□ -0.54
HERPUD1-210ENST00000565966 EGR3Q06889 387 aa11.7□□□□□ -0.54
HERPUD1-210ENST00000565966 TIGD6Q17RP2 521 aa11.7□□□□□ -0.54
HERPUD1-210ENST00000565966 TTC23Q5W5X9 447 aa11.7□□□□□ -0.54
HERPUD1-210ENST00000565966 FAM166AQ6J272 317 aa11.7□□□□□ -0.54
HERPUD1-210ENST00000565966 OR10H4Q8NGA5 316 aa11.7□□□□□ -0.54
HERPUD1-210ENST00000565966 CLDND2Q8NHS1 167 aa11.7□□□□□ -0.54
HERPUD1-210ENST00000565966 APH1BQ8WW43 257 aa11.7□□□□□ -0.54
HERPUD1-210ENST00000565966 ITLN1Q8WWA0 313 aa11.7□□□□□ -0.54
HERPUD1-210ENST00000565966 RAB1CQ92928 201 aa11.7□□□□□ -0.54
HERPUD1-210ENST00000565966 REEP6Q96HR9 211 aa11.7□□□□□ -0.54
HERPUD1-210ENST00000565966 OR2V2Q96R30 315 aa11.7□□□□□ -0.54
HERPUD1-210ENST00000565966 SOX7Q9BT81 388 aa11.7□□□□□ -0.54
HERPUD1-210ENST00000565966 OR10A2Q9H208 303 aa11.7□□□□□ -0.54
HERPUD1-210ENST00000565966 OPA3Q9H6K4 179 aa11.7□□□□□ -0.54
HERPUD1-210ENST00000565966 TMEM160Q9NX00 188 aa11.7□□□□□ -0.54
HERPUD1-210ENST00000565966 FAM206AQ9NX38 181 aa11.7□□□□□ -0.54
HERPUD1-210ENST00000565966 MRM2Q9UI43 246 aaKnown RBP11.7□□□□□ -0.54
HERPUD1-210ENST00000565966 ARHGAP32A7KAX9 2087 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 hCG_38984A0A1B0GV85 526 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 ACOD1A6NK06 481 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 SNTNA6NMZ2 147 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 H0YHG0 523 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 J3QRE1 110 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 WNT9BO14905 357 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 MLNRO43193 412 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 CRLF1O75462 422 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 SRSF10O75494 262 aaKnown RBP11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 WBP4O75554 376 aaKnown RBP11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 FAM3AP98173 230 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 IL5RAQ01344 420 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 MVKQ03426 396 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 ZNF85Q03923 595 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 ZNF91Q05481 1191 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 GFOD2Q3B7J2 385 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 ZNF684Q5T5D7 378 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 AVPI1Q5T686 147 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 ZNF691Q5VV52 312 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 PEG10Q86TG7 708 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms