RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 TMEM178BH3BS89 294 aa16.74■□□□□ 0.27
CMTM3-211ENST00000565922 MITFO75030 526 aaPredicted RBP16.74■□□□□ 0.27
CMTM3-211ENST00000565922 HLA-DPB1P04440 258 aa16.74■□□□□ 0.27
CMTM3-211ENST00000565922 SBK2P0C263 348 aa16.74■□□□□ 0.27
CMTM3-211ENST00000565922 CPT2P23786 658 aa16.74■□□□□ 0.27
CMTM3-211ENST00000565922 THBS2P35442 1172 aa16.74■□□□□ 0.27
CMTM3-211ENST00000565922 SRP14P37108 136 aaKnown RBP16.74■□□□□ 0.27
CMTM3-211ENST00000565922 MDH2P40926 338 aaKnown RBP16.74■□□□□ 0.27
CMTM3-211ENST00000565922 PRSS12P56730 875 aa16.74■□□□□ 0.27
CMTM3-211ENST00000565922 ZNF121P58317 390 aaPredicted RBP16.74■□□□□ 0.27
CMTM3-211ENST00000565922 FTMTQ8N4E7 242 aa16.74■□□□□ 0.27
CMTM3-211ENST00000565922 OR56B2PQ8NGI1 322 aa16.74■□□□□ 0.27
CMTM3-211ENST00000565922 OR11L1Q8NGX0 322 aa16.74■□□□□ 0.27
CMTM3-211ENST00000565922 PYDC1Q8WXC3 89 aa16.74■□□□□ 0.27
CMTM3-211ENST00000565922 PGAM5Q96HS1 289 aa16.74■□□□□ 0.27
CMTM3-211ENST00000565922 AMELYQ99218 206 aa16.74■□□□□ 0.27
CMTM3-211ENST00000565922 TEAD3Q99594 435 aa16.74■□□□□ 0.27
CMTM3-211ENST00000565922 CIB1Q99828 191 aa16.74■□□□□ 0.27
CMTM3-211ENST00000565922 RBM4BQ9BQ04 359 aaKnown RBP16.74■□□□□ 0.27
CMTM3-211ENST00000565922 DNAJC27Q9NZQ0 273 aa16.74■□□□□ 0.27
CMTM3-211ENST00000565922 A0A0G2JMP0 313 aa16.73■□□□□ 0.27
CMTM3-211ENST00000565922 A0A0X1KG70 313 aa16.73■□□□□ 0.27
CMTM3-211ENST00000565922 KIAA1324LA8MWY0 1029 aaPredicted RBP16.73■□□□□ 0.27
CMTM3-211ENST00000565922 PRKYO43930 277 aa16.73■□□□□ 0.27
CMTM3-211ENST00000565922 FSTL3O95633 263 aa16.73■□□□□ 0.27
CMTM3-211ENST00000565922 CA6P23280 308 aa16.73■□□□□ 0.27
CMTM3-211ENST00000565922 GATA3P23771 443 aa16.73■□□□□ 0.27
CMTM3-211ENST00000565922 NXNL2Q5VZ03 156 aa16.73■□□□□ 0.27
CMTM3-211ENST00000565922 C12orf73Q69YU5 71 aa16.73■□□□□ 0.27
CMTM3-211ENST00000565922 IL17RELQ6ZVW7 336 aa16.73■□□□□ 0.27
CMTM3-211ENST00000565922 FAM57BQ71RH2 274 aa16.73■□□□□ 0.27
CMTM3-211ENST00000565922 KRT77Q7Z794 578 aa16.73■□□□□ 0.27
CMTM3-211ENST00000565922 MOGAT3Q86VF5 341 aa16.73■□□□□ 0.27
CMTM3-211ENST00000565922 LRRC28Q86X40 367 aaPredicted RBP16.73■□□□□ 0.27
CMTM3-211ENST00000565922 GID4Q8IVV7 300 aa16.73■□□□□ 0.27
CMTM3-211ENST00000565922 PLPP7Q8NBV4 271 aa16.73■□□□□ 0.27
CMTM3-211ENST00000565922 OR4M2Q8NGB6 313 aa16.73■□□□□ 0.27
CMTM3-211ENST00000565922 TMEM163Q8TC26 289 aa16.73■□□□□ 0.27
CMTM3-211ENST00000565922 REEP6Q96HR9 211 aa16.73■□□□□ 0.27
CMTM3-211ENST00000565922 CNN2Q99439 309 aaKnown RBP16.73■□□□□ 0.27
CMTM3-211ENST00000565922 DCAF16Q9NXF7 216 aa16.73■□□□□ 0.27
CMTM3-211ENST00000565922 ZNF391Q9UJN7 358 aa16.73■□□□□ 0.27
CMTM3-211ENST00000565922 WNK2Q9Y3S1 2297 aa16.73■□□□□ 0.27
CMTM3-211ENST00000565922 ANKRD30BLA7E2S9 258 aa16.72■□□□□ 0.27
CMTM3-211ENST00000565922 FOXH1O75593 365 aa16.72■□□□□ 0.27
CMTM3-211ENST00000565922 PNPP00491 289 aa16.72■□□□□ 0.27
CMTM3-211ENST00000565922 ALOX5APP20292 161 aa16.72■□□□□ 0.27
CMTM3-211ENST00000565922 PSMA6P60900 246 aaKnown RBP16.72■□□□□ 0.27
CMTM3-211ENST00000565922 SCGB2A2Q13296 93 aa16.72■□□□□ 0.27
CMTM3-211ENST00000565922 KPNB1Q14974 876 aaKnown RBP16.72■□□□□ 0.27
CMTM3-211ENST00000565922 DEGS2Q6QHC5 323 aa16.72■□□□□ 0.27
CMTM3-211ENST00000565922 MEPCEQ7L2J0 689 aaKnown RBP16.72■□□□□ 0.27
CMTM3-211ENST00000565922 PRSS45Q7RTY3 260 aa16.72■□□□□ 0.27
CMTM3-211ENST00000565922 TCEANCQ8N8B7 351 aa16.72■□□□□ 0.27
CMTM3-211ENST00000565922 ZNF420Q8TAQ5 688 aaPredicted RBP16.72■□□□□ 0.27
CMTM3-211ENST00000565922 Q8TCH9 128 aa16.72■□□□□ 0.27
CMTM3-211ENST00000565922 ASB17Q8WXJ9 295 aa16.72■□□□□ 0.27
CMTM3-211ENST00000565922 RAB3IPQ96QF0 476 aaPredicted RBP16.72■□□□□ 0.27
CMTM3-211ENST00000565922 MNTQ99583 582 aa16.72■□□□□ 0.27
CMTM3-211ENST00000565922 GABARAPL3Q9BY60 117 aa16.72■□□□□ 0.27
CMTM3-211ENST00000565922 MROQ9BYG7 248 aa16.72■□□□□ 0.27
CMTM3-211ENST00000565922 FN3KRPQ9HA64 309 aa16.72■□□□□ 0.27
CMTM3-211ENST00000565922 PATZ1Q9HBE1 687 aaKnown RBP16.72■□□□□ 0.27
CMTM3-211ENST00000565922 ORC6Q9Y5N6 252 aa16.72■□□□□ 0.27
CMTM3-211ENST00000565922 CCDC182A6NF36 153 aa16.71■□□□□ 0.27
CMTM3-211ENST00000565922 SAC3D1A6NKF1 404 aa16.71■□□□□ 0.27
CMTM3-211ENST00000565922 J3QLI3 93 aa16.71■□□□□ 0.27
CMTM3-211ENST00000565922 PHYHO14832 338 aa16.71■□□□□ 0.27
CMTM3-211ENST00000565922 PLPP2O43688 288 aa16.71■□□□□ 0.27
CMTM3-211ENST00000565922 FAM3AP98173 230 aa16.71■□□□□ 0.27
CMTM3-211ENST00000565922 MAB21L1Q13394 359 aa16.71■□□□□ 0.27
CMTM3-211ENST00000565922 ZMYND11Q15326 602 aa16.71■□□□□ 0.27
CMTM3-211ENST00000565922 LRRN1Q6UXK5 716 aa16.71■□□□□ 0.27
CMTM3-211ENST00000565922 CSNK2A3Q8NEV1 391 aa16.71■□□□□ 0.27
CMTM3-211ENST00000565922 SGK3Q96BR1 496 aa16.71■□□□□ 0.27
CMTM3-211ENST00000565922 BRD7Q9NPI1 651 aa16.71■□□□□ 0.27
CMTM3-211ENST00000565922 C14orf119Q9NWQ9 140 aa16.71■□□□□ 0.27
CMTM3-211ENST00000565922 LRP12Q9Y561 859 aa16.71■□□□□ 0.27
CMTM3-211ENST00000565922 hCG_38984A0A1B0GV85 526 aa16.7■□□□□ 0.26
CMTM3-211ENST00000565922 C5orf63A6NC05 138 aa16.7■□□□□ 0.26
CMTM3-211ENST00000565922 ZNF254O75437 659 aa16.7■□□□□ 0.26
CMTM3-211ENST00000565922 CYB5R3P00387 301 aaPredicted RBP16.7■□□□□ 0.26
CMTM3-211ENST00000565922 MRPL3P09001 348 aaKnown RBP16.7■□□□□ 0.26
CMTM3-211ENST00000565922 EPHA2P29317 976 aa16.7■□□□□ 0.26
CMTM3-211ENST00000565922 DCTDP32321 178 aa16.7■□□□□ 0.26
CMTM3-211ENST00000565922 GFOD2Q3B7J2 385 aa16.7■□□□□ 0.26
CMTM3-211ENST00000565922 FAHD2BQ6P2I3 314 aaPredicted RBP16.7■□□□□ 0.26
CMTM3-211ENST00000565922 OR8S1Q8NH09 359 aa16.7■□□□□ 0.26
CMTM3-211ENST00000565922 ITFG2Q969R8 447 aa16.7■□□□□ 0.26
CMTM3-211ENST00000565922 FAHD2AQ96GK7 314 aa16.7■□□□□ 0.26
CMTM3-211ENST00000565922 RIBC2Q9H4K1 309 aa16.7■□□□□ 0.26
CMTM3-211ENST00000565922 PPIAL4EA0A075B759 164 aa16.69■□□□□ 0.26
CMTM3-211ENST00000565922 PPIAL4CA0A0B4J2A2 164 aa16.69■□□□□ 0.26
CMTM3-211ENST00000565922 ACOD1A6NK06 481 aa16.69■□□□□ 0.26
CMTM3-211ENST00000565922 PPIAL4DF5H284 164 aa16.69■□□□□ 0.26
CMTM3-211ENST00000565922 PTBP3O95758 552 aaKnown RBP16.69■□□□□ 0.26
CMTM3-211ENST00000565922 PPIAL4FP0DN26 164 aa16.69■□□□□ 0.26
CMTM3-211ENST00000565922 ANOS1P23352 680 aa16.69■□□□□ 0.26
CMTM3-211ENST00000565922 GNALP38405 381 aa16.69■□□□□ 0.26
CMTM3-211ENST00000565922 EFNB1P98172 346 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms