RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 FAM26DQ5JW98 314 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 CMTM4Q8IZR5 234 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 ATOH8Q96SQ7 321 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 APOOQ9BUR5 198 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 FIGNL2A6NMB9 653 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 HMSDA8MTL9 139 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 M0R135 149 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 NRASP01111 189 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 CD96P40200 585 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 RACK1P63244 317 aaKnown RBP4.64□□□□□ -1.67
SMG1-211ENST00000565324 PERPQ96FX8 193 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 ZNF799Q96GE5 643 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 GRAMD2BQ96HH9 432 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 TMEM56Q96MV1 263 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 TEAD3Q99594 435 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 PECRQ9BY49 303 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 LINC00597Q9H2U6 94 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 UBE2ZQ9H832 354 aaPredicted RBP4.64□□□□□ -1.67
SMG1-211ENST00000565324 AKIP1Q9NQ31 210 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 DRGXA6NNA5 263 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 HEPACAM2A8MVW5 462 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 SELENOFO60613 162 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 FAM3AP98173 230 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 FOXO1Q12778 655 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 C1orf140Q5VVS0 124 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 TBPL2Q6SJ96 375 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 VASH2Q86V25 355 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 FAM71CQ8NEG0 241 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 OR4F17Q8NGA8 305 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 OR2D3Q8NGH3 330 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 PCNPQ8WW12 178 aaKnown RBP4.64□□□□□ -1.67
SMG1-211ENST00000565324 C11orf40Q8WZ69 217 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 C3orf30Q96M34 536 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 ULBP3Q9BZM4 244 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 CMC2Q9NRP2 79 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 LSM2Q9Y333 95 aaKnown RBP4.64□□□□□ -1.67
SMG1-211ENST00000565324 MMP24Q9Y5R2 645 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 UNC13CQ8NB66 2214 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 G3V3Y1 287 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 KRASP01116 189 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 FGF2P09038 288 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 NDUFB7P17568 137 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 RPL27P61353 136 aaKnown RBP4.64□□□□□ -1.67
SMG1-211ENST00000565324 OR4A47Q6IF82 309 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 LIPIQ6XZB0 460 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 ZNF813Q6ZN06 617 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 CALHM3Q86XJ0 350 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 OR5D18Q8NGL1 313 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 OR4A4PQ8NGN8 299 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 OR2T10Q8NGZ9 312 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 DUSP21Q9H596 190 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 LHX3Q9UBR4 397 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 SLC17A4Q9Y2C5 497 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 MMACHCQ9Y4U1 282 aa4.64□□□□□ -1.67
SMG1-211ENST00000565324 EIF4E2O60573 245 aaKnown RBP4.63□□□□□ -1.67
SMG1-211ENST00000565324 PGA4P0DJD7 388 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 PGA5P0DJD9 388 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 GPX2P18283 190 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 TBXA2RP21731 343 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 PCSK6P29122 969 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 ISL1P61371 349 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 DCAF12Q5T6F0 453 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 TMEM268Q5VZI3 342 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 MAMDC4Q6UXC1 1216 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 TMEM64Q6YI46 380 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 GLDNQ6ZMI3 551 aaPredicted RBP4.63□□□□□ -1.67
SMG1-211ENST00000565324 HTR3DQ70Z44 454 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 SCCPDHQ8NBX0 429 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 LRRC3BQ96PB8 259 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 ZIC5Q96T25 663 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 TRAPPC4Q9Y296 219 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 TDRD6O60522 2096 aaKnown RBP4.63□□□□□ -1.67
SMG1-211ENST00000565324 COL1A1P02452 1464 aaPredicted RBP4.63□□□□□ -1.67
SMG1-211ENST00000565324 ACOT8O14734 319 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 AKR7A2O43488 359 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 HCRTR1O43613 425 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 EVX2Q03828 476 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 GPNMBQ14956 572 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 FER1L6-AS2Q96M78 137 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 SEBOXQ9HB31 216 aaPredicted RBP4.63□□□□□ -1.67
SMG1-211ENST00000565324 HSFX1Q9UBD0 423 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 CDC42EP3Q9UKI2 254 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 AMDHD2Q9Y303 409 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 LAMB2P55268 1798 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 LOC107986453A0A1B0GWG9 222 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 PRSS38A1L453 326 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 SIAH2O43255 324 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 GJB5O95377 273 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 HAND1O96004 215 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 SMIM18P0DKX4 95 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 TMEM81Q6P7N7 255 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 ZDHHC23Q8IYP9 409 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 LILRA2Q8N149 483 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 ARIH2OSQ8N7S6 290 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 C19orf43Q9BQ61 176 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 RSG1Q9BU20 258 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 CDCP1Q9H5V8 836 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 CHST2Q9Y4C5 530 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 TIMM10BQ9Y5J6 103 aa4.63□□□□□ -1.67
SMG1-211ENST00000565324 HEMK1Q9Y5R4 338 aaPredicted RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms